GCA_901830425.1 - 4 region(s)

Identified primary metabolite regions

CABFKV010000001 (original name was: CABFKV010000001.1)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 1.1	Pyruvate2acetate-formate	SCFA	173,244	196,494	Pyruvate to acetate-formate E. coli	PFL_acetate	100%

CABFKV010000024 (original name was: CABFKV010000024.1)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 4.1	gallic_acid_met	Aromatic	8,497	30,554	Gallic acid degradation B. sp. KLE	GALL	100%

CABFKV010000068 (original name was: CABFKV010000068.1)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 8.1	TPP_AA_metabolism	Putative	38,543	64,977

CABFKV010000293 (original name was: CABFKV010000293.1)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 78.1	TPP_fatty_acids	Putative	43,389	69,314

No primary metabolite regions were found in these records:: CABFKV010000002 (original name was: CABFKV010000002.1); CABFKV010000013 (original name was: CABFKV010000013.1); CABFKV010000035 (original name was: CABFKV010000035.1); CABFKV010000046 (original name was: CABFKV010000046.1); CABFKV010000057 (original name was: CABFKV010000057.1); CABFKV010000079 (original name was: CABFKV010000079.1); CABFKV010000090 (original name was: CABFKV010000090.1); CABFKV010000101 (original name was: CABFKV010000101.1); CABFKV010000112 (original name was: CABFKV010000112.1); CABFKV010000113 (original name was: CABFKV010000113.1); CABFKV010000124 (original name was: CABFKV010000124.1); CABFKV010000135 (original name was: CABFKV010000135.1); CABFKV010000146 (original name was: CABFKV010000146.1); CABFKV010000157 (original name was: CABFKV010000157.1); CABFKV010000168 (original name was: CABFKV010000168.1); CABFKV010000179 (original name was: CABFKV010000179.1); CABFKV010000190 (original name was: CABFKV010000190.1); CABFKV010000201 (original name was: CABFKV010000201.1); CABFKV010000212 (original name was: CABFKV010000212.1); CABFKV010000223 (original name was: CABFKV010000223.1); CABFKV010000224 (original name was: CABFKV010000224.1); CABFKV010000235 (original name was: CABFKV010000235.1); CABFKV010000241 (original name was: CABFKV010000241.1); CABFKV010000242 (original name was: CABFKV010000242.1); CABFKV010000243 (original name was: CABFKV010000243.1); CABFKV010000244 (original name was: CABFKV010000244.1); CABFKV010000245 (original name was: CABFKV010000245.1); CABFKV010000246 (original name was: CABFKV010000246.1); CABFKV010000247 (original name was: CABFKV010000247.1); CABFKV010000248 (original name was: CABFKV010000248.1); CABFKV010000249 (original name was: CABFKV010000249.1); CABFKV010000250 (original name was: CABFKV010000250.1); CABFKV010000251 (original name was: CABFKV010000251.1); CABFKV010000252 (original name was: CABFKV010000252.1); CABFKV010000253 (original name was: CABFKV010000253.1); CABFKV010000254 (original name was: CABFKV010000254.1); CABFKV010000255 (original name was: CABFKV010000255.1); CABFKV010000256 (original name was: CABFKV010000256.1); CABFKV010000257 (original name was: CABFKV010000257.1); CABFKV010000258 (original name was: CABFKV010000258.1); CABFKV010000259 (original name was: CABFKV010000259.1); CABFKV010000260 (original name was: CABFKV010000260.1); CABFKV010000261 (original name was: CABFKV010000261.1); CABFKV010000262 (original name was: CABFKV010000262.1); CABFKV010000263 (original name was: CABFKV010000263.1); CABFKV010000264 (original name was: CABFKV010000264.1); CABFKV010000265 (original name was: CABFKV010000265.1); CABFKV010000266 (original name was: CABFKV010000266.1); CABFKV010000267 (original name was: CABFKV010000267.1); CABFKV010000268 (original name was: CABFKV010000268.1); CABFKV010000269 (original name was: CABFKV010000269.1); CABFKV010000270 (original name was: CABFKV010000270.1); CABFKV010000271 (original name was: CABFKV010000271.1); CABFKV010000272 (original name was: CABFKV010000272.1); CABFKV010000273 (original name was: CABFKV010000273.1); CABFKV010000274 (original name was: CABFKV010000274.1); CABFKV010000275 (original name was: CABFKV010000275.1); CABFKV010000276 (original name was: CABFKV010000276.1); CABFKV010000277 (original name was: CABFKV010000277.1); CABFKV010000278 (original name was: CABFKV010000278.1); CABFKV010000279 (original name was: CABFKV010000279.1); CABFKV010000280 (original name was: CABFKV010000280.1); CABFKV010000281 (original name was: CABFKV010000281.1); CABFKV010000282 (original name was: CABFKV010000282.1); CABFKV010000283 (original name was: CABFKV010000283.1); CABFKV010000284 (original name was: CABFKV010000284.1); CABFKV010000285 (original name was: CABFKV010000285.1); CABFKV010000286 (original name was: CABFKV010000286.1); CABFKV010000287 (original name was: CABFKV010000287.1); CABFKV010000288 (original name was: CABFKV010000288.1); CABFKV010000289 (original name was: CABFKV010000289.1); CABFKV010000290 (original name was: CABFKV010000290.1); CABFKV010000291 (original name was: CABFKV010000291.1); CABFKV010000292 (original name was: CABFKV010000292.1); CABFKV010000294 (original name was: CABFKV010000294.1); CABFKV010000295 (original name was: CABFKV010000295.1); CABFKV010000296 (original name was: CABFKV010000296.1); CABFKV010000297 (original name was: CABFKV010000297.1); CABFKV010000298 (original name was: CABFKV010000298.1); CABFKV010000299 (original name was: CABFKV010000299.1); CABFKV010000300 (original name was: CABFKV010000300.1); CABFKV010000301 (original name was: CABFKV010000301.1); CABFKV010000302 (original name was: CABFKV010000302.1); CABFKV010000304 (original name was: CABFKV010000304.1)

Compact view

c00001_CABFKV0.. - Region 1 - Pyruvate2acetate-formate

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Location: 173,244 - 196,494 nt. (total: 23,251 nt) Show pHMM detection rules used

Pyruvate2acetate-formate: ((PFL_acetate1 or PFL_acetate2) and Radical_SAM)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

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Gene details

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KnownClusterBlast

Similar known gene clusters

c00004_CABFKV0.. - Region 1 - gallic_acid_met

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Location: 8,497 - 30,554 nt. (total: 22,058 nt) Show pHMM detection rules used

gallic_acid_met: (minimum(1, [Flavoprotein, Semialdhyde_dh]) and gallic_acid)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

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Gene details

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KnownClusterBlast

Similar known gene clusters

c00008_CABFKV0.. - Region 1 - TPP_AA_metabolism

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Location: 38,543 - 64,977 nt. (total: 26,435 nt) Show pHMM detection rules used

Region on contig edge.

TPP_AA_metabolism: (TPP_enzyme_C and not (PFL-like or PFL_6_pcresol or PFL_9_tma or Gly_radical or Gly_430_pcre or Gly_8-9_TMA or PFL_acetate1 or PFL_acetate2 or Gly_radical_scatole or PFL_proline or PFL_toluene) and minimum(2, [ALS_ss_C, AlaDh_PNT_C, Arginase, BKACE, BcrAD_BadFG, Beta_elim_lyase, CPSase_L_D2, Cys_Met_Meta_PP, ELFV_dehydrog, GRDB, Glu_syn_central, Glu_synthase, Gly_reductase, HAAA1, HG2B1, HG2B2, HGD-D, HleuD1, HleuD2, HleuS1, HleuS2, Homoserine_dh, ILVD_EDD, IlvC, Lactoyl-CoA1, Lactoyl-CoA2, Lyase_aromatic, MAAL_C, OKR_DC_1_5_lysine, OKR_DC_1_5_ornithine, OKR_DC_1_7_arginine, OKR_DC_1_C, OTCace, PALP, Proline_reductase, Sacchrp_dh_C, TPL, Thr_dehydrat_C, TnaA, Urocanase]) and not (POR or POR_N or PFOR_II))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

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Gene details

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KnownClusterBlast

Similar known gene clusters

No matches found.

c00078_CABFKV0.. - Region 1 - TPP_fatty_acids

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Location: 43,389 - 69,314 nt. (total: 25,926 nt) Show pHMM detection rules used

TPP_fatty_acids: (TPP_enzyme_C and (minimum(2, [ACD1_car, ACP_syn_III_C, AcetylCoA_hyd_C, AcetylCoA_hydro, Acyl-CoA_dh_1, Acyl-CoA_dh_2, Butyrate_kinase, CT_Propionyl_CoA1, CT_Propionyl_CoA2, CT_Propionyl_CoA3, Carboxyl_trans, CoA_trans, CoA_trans_230_acto, CoA_trans_2_CAF, CoA_trans_6_Glutaconate, E1_dh, ECH_1, ECH_2, HBT, HBT_2, HCDH, HpaB, Ketoacyl-synt_C, Thiolase_C, Thiolase_N, adh_short, adh_short_C2]) or FA_synthesis) and not (PFL-like or PFL_6_pcresol or PFL_9_tma or Gly_radical or Gly_430_pcre or PFL_acetate1 or PFL_acetate2 or Gly_radical_scatole or PFL_proline or PFL_toluene) and not (POR or POR_N))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

reset view

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Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

No matches found.