GCA_901971795.1 - 4 region(s)

Identified primary metabolite regions

CABFNJ010000009 (original name was: CABFNJ010000009.1)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 9.1	gallic_acid_met	Aromatic	10,054	32,111	Gallic acid degradation B. sp. KLE	GALL	100%

CABFNJ010000014 (original name was: CABFNJ010000014.1)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 14.1	TPP_AA_metabolism	Putative	90,432	122,493

CABFNJ010000015 (original name was: CABFNJ010000015.1)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 15.1	Pyruvate2acetate-formate	SCFA	11,592	34,842	Pyruvate to acetate-formate E. coli	PFL_acetate	100%

CABFNJ010000030 (original name was: CABFNJ010000030.1)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 30.1	TPP_fatty_acids	Putative	43,081	69,078

No primary metabolite regions were found in these records:: CABFNJ010000001 (original name was: CABFNJ010000001.1); CABFNJ010000002 (original name was: CABFNJ010000002.1); CABFNJ010000003 (original name was: CABFNJ010000003.1); CABFNJ010000004 (original name was: CABFNJ010000004.1); CABFNJ010000005 (original name was: CABFNJ010000005.1); CABFNJ010000006 (original name was: CABFNJ010000006.1); CABFNJ010000007 (original name was: CABFNJ010000007.1); CABFNJ010000008 (original name was: CABFNJ010000008.1); CABFNJ010000010 (original name was: CABFNJ010000010.1); CABFNJ010000011 (original name was: CABFNJ010000011.1); CABFNJ010000012 (original name was: CABFNJ010000012.1); CABFNJ010000013 (original name was: CABFNJ010000013.1); CABFNJ010000016 (original name was: CABFNJ010000016.1); CABFNJ010000017 (original name was: CABFNJ010000017.1); CABFNJ010000018 (original name was: CABFNJ010000018.1); CABFNJ010000019 (original name was: CABFNJ010000019.1); CABFNJ010000020 (original name was: CABFNJ010000020.1); CABFNJ010000021 (original name was: CABFNJ010000021.1); CABFNJ010000022 (original name was: CABFNJ010000022.1); CABFNJ010000023 (original name was: CABFNJ010000023.1); CABFNJ010000024 (original name was: CABFNJ010000024.1); CABFNJ010000025 (original name was: CABFNJ010000025.1); CABFNJ010000026 (original name was: CABFNJ010000026.1); CABFNJ010000027 (original name was: CABFNJ010000027.1); CABFNJ010000028 (original name was: CABFNJ010000028.1); CABFNJ010000029 (original name was: CABFNJ010000029.1); CABFNJ010000031 (original name was: CABFNJ010000031.1); CABFNJ010000032 (original name was: CABFNJ010000032.1); CABFNJ010000033 (original name was: CABFNJ010000033.1); CABFNJ010000034 (original name was: CABFNJ010000034.1); CABFNJ010000035 (original name was: CABFNJ010000035.1); CABFNJ010000036 (original name was: CABFNJ010000036.1); CABFNJ010000037 (original name was: CABFNJ010000037.1); CABFNJ010000038 (original name was: CABFNJ010000038.1); CABFNJ010000039 (original name was: CABFNJ010000039.1); CABFNJ010000040 (original name was: CABFNJ010000040.1); CABFNJ010000041 (original name was: CABFNJ010000041.1); CABFNJ010000042 (original name was: CABFNJ010000042.1); CABFNJ010000043 (original name was: CABFNJ010000043.1); CABFNJ010000044 (original name was: CABFNJ010000044.1); CABFNJ010000045 (original name was: CABFNJ010000045.1); CABFNJ010000046 (original name was: CABFNJ010000046.1); CABFNJ010000047 (original name was: CABFNJ010000047.1); CABFNJ010000048 (original name was: CABFNJ010000048.1); CABFNJ010000049 (original name was: CABFNJ010000049.1); CABFNJ010000050 (original name was: CABFNJ010000050.1); CABFNJ010000051 (original name was: CABFNJ010000051.1); CABFNJ010000052 (original name was: CABFNJ010000052.1); CABFNJ010000053 (original name was: CABFNJ010000053.1); CABFNJ010000054 (original name was: CABFNJ010000054.1); CABFNJ010000055 (original name was: CABFNJ010000055.1); CABFNJ010000056 (original name was: CABFNJ010000056.1); CABFNJ010000057 (original name was: CABFNJ010000057.1); CABFNJ010000058 (original name was: CABFNJ010000058.1); CABFNJ010000059 (original name was: CABFNJ010000059.1); CABFNJ010000060 (original name was: CABFNJ010000060.1); CABFNJ010000061 (original name was: CABFNJ010000061.1); CABFNJ010000062 (original name was: CABFNJ010000062.1); CABFNJ010000063 (original name was: CABFNJ010000063.1); CABFNJ010000064 (original name was: CABFNJ010000064.1); CABFNJ010000065 (original name was: CABFNJ010000065.1); CABFNJ010000066 (original name was: CABFNJ010000066.1); CABFNJ010000067 (original name was: CABFNJ010000067.1); CABFNJ010000068 (original name was: CABFNJ010000068.1); CABFNJ010000069 (original name was: CABFNJ010000069.1); CABFNJ010000070 (original name was: CABFNJ010000070.1); CABFNJ010000071 (original name was: CABFNJ010000071.1); CABFNJ010000072 (original name was: CABFNJ010000072.1); CABFNJ010000073 (original name was: CABFNJ010000073.1); CABFNJ010000074 (original name was: CABFNJ010000074.1); CABFNJ010000075 (original name was: CABFNJ010000075.1); CABFNJ010000076 (original name was: CABFNJ010000076.1); CABFNJ010000077 (original name was: CABFNJ010000077.1); CABFNJ010000078 (original name was: CABFNJ010000078.1); CABFNJ010000079 (original name was: CABFNJ010000079.1); CABFNJ010000080 (original name was: CABFNJ010000080.1)

Compact view

c00009_CABFNJ0.. - Region 1 - gallic_acid_met

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Location: 10,054 - 32,111 nt. (total: 22,058 nt) Show pHMM detection rules used

gallic_acid_met: (minimum(1, [Flavoprotein, Semialdhyde_dh]) and gallic_acid)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

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Gene details

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KnownClusterBlast

Similar known gene clusters

c00014_CABFNJ0.. - Region 1 - TPP_AA_metabolism

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Location: 90,432 - 122,493 nt. (total: 32,062 nt) Show pHMM detection rules used

TPP_AA_metabolism: (TPP_enzyme_C and not (PFL-like or PFL_6_pcresol or PFL_9_tma or Gly_radical or Gly_430_pcre or Gly_8-9_TMA or PFL_acetate1 or PFL_acetate2 or Gly_radical_scatole or PFL_proline or PFL_toluene) and minimum(2, [ALS_ss_C, AlaDh_PNT_C, Arginase, BKACE, BcrAD_BadFG, Beta_elim_lyase, CPSase_L_D2, Cys_Met_Meta_PP, ELFV_dehydrog, GRDB, Glu_syn_central, Glu_synthase, Gly_reductase, HAAA1, HG2B1, HG2B2, HGD-D, HleuD1, HleuD2, HleuS1, HleuS2, Homoserine_dh, ILVD_EDD, IlvC, Lactoyl-CoA1, Lactoyl-CoA2, Lyase_aromatic, MAAL_C, OKR_DC_1_5_lysine, OKR_DC_1_5_ornithine, OKR_DC_1_7_arginine, OKR_DC_1_C, OTCace, PALP, Proline_reductase, Sacchrp_dh_C, TPL, Thr_dehydrat_C, TnaA, Urocanase]) and not (POR or POR_N or PFOR_II))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

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Gene details

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KnownClusterBlast

Similar known gene clusters

No matches found.

c00015_CABFNJ0.. - Region 1 - Pyruvate2acetate-formate

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Location: 11,592 - 34,842 nt. (total: 23,251 nt) Show pHMM detection rules used

Pyruvate2acetate-formate: ((PFL_acetate1 or PFL_acetate2) and Radical_SAM)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

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Gene details

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KnownClusterBlast

Similar known gene clusters

c00030_CABFNJ0.. - Region 1 - TPP_fatty_acids

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Location: 43,081 - 69,078 nt. (total: 25,998 nt) Show pHMM detection rules used

TPP_fatty_acids: (TPP_enzyme_C and (minimum(2, [ACD1_car, ACP_syn_III_C, AcetylCoA_hyd_C, AcetylCoA_hydro, Acyl-CoA_dh_1, Acyl-CoA_dh_2, Butyrate_kinase, CT_Propionyl_CoA1, CT_Propionyl_CoA2, CT_Propionyl_CoA3, Carboxyl_trans, CoA_trans, CoA_trans_230_acto, CoA_trans_2_CAF, CoA_trans_6_Glutaconate, E1_dh, ECH_1, ECH_2, HBT, HBT_2, HCDH, HpaB, Ketoacyl-synt_C, Thiolase_C, Thiolase_N, adh_short, adh_short_C2]) or FA_synthesis) and not (PFL-like or PFL_6_pcresol or PFL_9_tma or Gly_radical or Gly_430_pcre or PFL_acetate1 or PFL_acetate2 or Gly_radical_scatole or PFL_proline or PFL_toluene) and not (POR or POR_N))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

reset view

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Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

No matches found.