GCA_902167895.1 - 2 region(s)

Identified primary metabolite regions

CABHNR010000021 (original name was: CABHNR010000021.1)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 17.1	Others_HGD_unassigned	Putative	86,064	111,178

CABHNR010000069 (original name was: CABHNR010000069.1)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 62.1	Fumarate2succinate,Pyruvate2acetate-formate	SCFA	21,406	60,855	Pyruvate to acetate-formate E. coli	PFL_acetate	100%

Region	Type	Class	From	To	Most similar known cluster	Similarity
Region 17.1	Others_HGD_unassigned	Putative	86,064	111,178
Region 62.1	Fumarate2succinate,Pyruvate2acetate-formate	SCFA	21,406	60,855	Pyruvate to acetate-formate E. coli	PFL_acetate	100%

No primary metabolite regions were found in these records:: CABHNR010000001 (original name was: CABHNR010000001.1); CABHNR010000002 (original name was: CABHNR010000002.1); CABHNR010000003 (original name was: CABHNR010000003.1); CABHNR010000004 (original name was: CABHNR010000004.1); CABHNR010000005 (original name was: CABHNR010000005.1); CABHNR010000006 (original name was: CABHNR010000006.1); CABHNR010000007 (original name was: CABHNR010000007.1); CABHNR010000012 (original name was: CABHNR010000012.1); CABHNR010000013 (original name was: CABHNR010000013.1); CABHNR010000014 (original name was: CABHNR010000014.1); CABHNR010000015 (original name was: CABHNR010000015.1); CABHNR010000016 (original name was: CABHNR010000016.1); CABHNR010000017 (original name was: CABHNR010000017.1); CABHNR010000018 (original name was: CABHNR010000018.1); CABHNR010000019 (original name was: CABHNR010000019.1); CABHNR010000020 (original name was: CABHNR010000020.1); CABHNR010000023 (original name was: CABHNR010000023.1); CABHNR010000024 (original name was: CABHNR010000024.1); CABHNR010000025 (original name was: CABHNR010000025.1); CABHNR010000026 (original name was: CABHNR010000026.1); CABHNR010000027 (original name was: CABHNR010000027.1); CABHNR010000028 (original name was: CABHNR010000028.1); CABHNR010000029 (original name was: CABHNR010000029.1); CABHNR010000030 (original name was: CABHNR010000030.1); CABHNR010000031 (original name was: CABHNR010000031.1); CABHNR010000032 (original name was: CABHNR010000032.1); CABHNR010000033 (original name was: CABHNR010000033.1); CABHNR010000035 (original name was: CABHNR010000035.1); CABHNR010000036 (original name was: CABHNR010000036.1); CABHNR010000037 (original name was: CABHNR010000037.1); CABHNR010000038 (original name was: CABHNR010000038.1); CABHNR010000039 (original name was: CABHNR010000039.1); CABHNR010000040 (original name was: CABHNR010000040.1); CABHNR010000041 (original name was: CABHNR010000041.1); CABHNR010000043 (original name was: CABHNR010000043.1); CABHNR010000044 (original name was: CABHNR010000044.1); CABHNR010000045 (original name was: CABHNR010000045.1); CABHNR010000046 (original name was: CABHNR010000046.1); CABHNR010000047 (original name was: CABHNR010000047.1); CABHNR010000048 (original name was: CABHNR010000048.1); CABHNR010000049 (original name was: CABHNR010000049.1); CABHNR010000050 (original name was: CABHNR010000050.1); CABHNR010000051 (original name was: CABHNR010000051.1); CABHNR010000052 (original name was: CABHNR010000052.1); CABHNR010000053 (original name was: CABHNR010000053.1); CABHNR010000054 (original name was: CABHNR010000054.1); CABHNR010000055 (original name was: CABHNR010000055.1); CABHNR010000056 (original name was: CABHNR010000056.1); CABHNR010000057 (original name was: CABHNR010000057.1); CABHNR010000058 (original name was: CABHNR010000058.1); CABHNR010000059 (original name was: CABHNR010000059.1); CABHNR010000060 (original name was: CABHNR010000060.1); CABHNR010000061 (original name was: CABHNR010000061.1); CABHNR010000062 (original name was: CABHNR010000062.1); CABHNR010000063 (original name was: CABHNR010000063.1); CABHNR010000064 (original name was: CABHNR010000064.1); CABHNR010000065 (original name was: CABHNR010000065.1); CABHNR010000066 (original name was: CABHNR010000066.1); CABHNR010000067 (original name was: CABHNR010000067.1); CABHNR010000068 (original name was: CABHNR010000068.1); CABHNR010000070 (original name was: CABHNR010000070.1); CABHNR010000071 (original name was: CABHNR010000071.1); CABHNR010000072 (original name was: CABHNR010000072.1); CABHNR010000073 (original name was: CABHNR010000073.1); CABHNR010000074 (original name was: CABHNR010000074.1); CABHNR010000075 (original name was: CABHNR010000075.1); CABHNR010000076 (original name was: CABHNR010000076.1); CABHNR010000077 (original name was: CABHNR010000077.1); CABHNR010000078 (original name was: CABHNR010000078.1); CABHNR010000079 (original name was: CABHNR010000079.1); CABHNR010000080 (original name was: CABHNR010000080.1); CABHNR010000081 (original name was: CABHNR010000081.1); CABHNR010000082 (original name was: CABHNR010000082.1); CABHNR010000083 (original name was: CABHNR010000083.1); CABHNR010000084 (original name was: CABHNR010000084.1); CABHNR010000085 (original name was: CABHNR010000085.1); CABHNR010000086 (original name was: CABHNR010000086.1); CABHNR010000087 (original name was: CABHNR010000087.1); CABHNR010000088 (original name was: CABHNR010000088.1); CABHNR010000089 (original name was: CABHNR010000089.1); CABHNR010000090 (original name was: CABHNR010000090.1); CABHNR010000091 (original name was: CABHNR010000091.1); CABHNR010000092 (original name was: CABHNR010000092.1); CABHNR010000093 (original name was: CABHNR010000093.1); CABHNR010000094 (original name was: CABHNR010000094.1); CABHNR010000096 (original name was: CABHNR010000096.1); CABHNR010000097 (original name was: CABHNR010000097.1)

Compact view

c00017_CABHNR0.. - Region 1 - Others_HGD_unassigned

Download region GenBank file

Location: 86,064 - 111,178 nt. (total: 25,115 nt) Show pHMM detection rules used

Others_HGD_unassigned: (minimum(1, [HAAA1, HG2B1, HG2B2, HGD-D, HleuD1, HleuD2, HleuS1, HleuS2, Lactoyl-CoA1, Lactoyl-CoA2]) and minimum(1, [ACP_syn_III, ACP_syn_III_C, AcetylCoA_hyd_C, AcetylCoA_hydro, Acyl-CoA_dh_1, Acyl-CoA_dh_2, AdoHcyase_NAD, AlaDh_PNT_C, BcrAD_BadFG, Biotin_lipoyl, Carboxyl_trans, CoA_trans, CoA_trans_230_acto, CoA_trans_6_Glutaconate, CoA_transf_3, ECH_1, ECH_2, ETF, ETF_alpha, FGGY_C, HCDH, HCDH_N, Hacid_dh, Hacid_dh_C, Mal_decarbox_Al, Peptidase_M22, Peptidase_M23, Thiolase_C, Thiolase_N, ketoacyl-synt]) and not (minimum(2, [AcetylCoA_hyd_C, BcrAD_BadFG, CoA_trans, CoA_trans_230_acto, Mal_decarbox_Al]) and Lactoyl-CoA2 and Lactoyl-CoA1) and not (minimum(4, [ACP_syn_III, ACP_syn_III_C, Acyl-CoA_dh_1, Acyl-CoA_dh_2, AlaDh_PNT_C, BcrAD_BadFG, ECH_1, ECH_2, ETF, ETF_alpha, HCDH, HCDH_N, Hacid_dh, Hacid_dh_C, IlvN, NAD_Gly3P_dh_N, Thiolase_C, Thiolase_N, ketoacyl-synt]) and HAAA1 and not HleuS1))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

No matches found.

c00062_CABHNR0.. - Region 1 - Fumarate2succinate,Pyruvate2acetate-formate