GCA_902167925.1 - 3 region(s)

Identified primary metabolite regions

CABHNQ010000003 (original name was: CABHNQ010000003.1)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 3.1	Pyruvate2acetate-formate	SCFA	642	24,019	Pyruvate to acetate-formate E. coli	PFL_acetate	100%

CABHNQ010000041 (original name was: CABHNQ010000041.1)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 38.1	Fumarate2succinate	SCFA	1	20,565	Fumarate2succinate suc dh E. coli	SUC	100%

CABHNQ010000087 (original name was: CABHNQ010000087.1)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 76.1	Others_HGD_unassigned	Putative	19,416	44,270

No primary metabolite regions were found in these records:: CABHNQ010000001 (original name was: CABHNQ010000001.1); CABHNQ010000002 (original name was: CABHNQ010000002.1); CABHNQ010000004 (original name was: CABHNQ010000004.1); CABHNQ010000005 (original name was: CABHNQ010000005.1); CABHNQ010000006 (original name was: CABHNQ010000006.1); CABHNQ010000007 (original name was: CABHNQ010000007.1); CABHNQ010000008 (original name was: CABHNQ010000008.1); CABHNQ010000009 (original name was: CABHNQ010000009.1); CABHNQ010000010 (original name was: CABHNQ010000010.1); CABHNQ010000012 (original name was: CABHNQ010000012.1); CABHNQ010000013 (original name was: CABHNQ010000013.1); CABHNQ010000014 (original name was: CABHNQ010000014.1); CABHNQ010000015 (original name was: CABHNQ010000015.1); CABHNQ010000016 (original name was: CABHNQ010000016.1); CABHNQ010000017 (original name was: CABHNQ010000017.1); CABHNQ010000018 (original name was: CABHNQ010000018.1); CABHNQ010000019 (original name was: CABHNQ010000019.1); CABHNQ010000020 (original name was: CABHNQ010000020.1); CABHNQ010000021 (original name was: CABHNQ010000021.1); CABHNQ010000023 (original name was: CABHNQ010000023.1); CABHNQ010000024 (original name was: CABHNQ010000024.1); CABHNQ010000025 (original name was: CABHNQ010000025.1); CABHNQ010000026 (original name was: CABHNQ010000026.1); CABHNQ010000027 (original name was: CABHNQ010000027.1); CABHNQ010000028 (original name was: CABHNQ010000028.1); CABHNQ010000029 (original name was: CABHNQ010000029.1); CABHNQ010000030 (original name was: CABHNQ010000030.1); CABHNQ010000031 (original name was: CABHNQ010000031.1); CABHNQ010000032 (original name was: CABHNQ010000032.1); CABHNQ010000033 (original name was: CABHNQ010000033.1); CABHNQ010000034 (original name was: CABHNQ010000034.1); CABHNQ010000035 (original name was: CABHNQ010000035.1); CABHNQ010000036 (original name was: CABHNQ010000036.1); CABHNQ010000037 (original name was: CABHNQ010000037.1); CABHNQ010000038 (original name was: CABHNQ010000038.1); CABHNQ010000040 (original name was: CABHNQ010000040.1); CABHNQ010000042 (original name was: CABHNQ010000042.1); CABHNQ010000043 (original name was: CABHNQ010000043.1); CABHNQ010000044 (original name was: CABHNQ010000044.1); CABHNQ010000046 (original name was: CABHNQ010000046.1); CABHNQ010000047 (original name was: CABHNQ010000047.1); CABHNQ010000048 (original name was: CABHNQ010000048.1); CABHNQ010000049 (original name was: CABHNQ010000049.1); CABHNQ010000050 (original name was: CABHNQ010000050.1); CABHNQ010000051 (original name was: CABHNQ010000051.1); CABHNQ010000052 (original name was: CABHNQ010000052.1); CABHNQ010000054 (original name was: CABHNQ010000054.1); CABHNQ010000055 (original name was: CABHNQ010000055.1); CABHNQ010000056 (original name was: CABHNQ010000056.1); CABHNQ010000057 (original name was: CABHNQ010000057.1); CABHNQ010000058 (original name was: CABHNQ010000058.1); CABHNQ010000059 (original name was: CABHNQ010000059.1); CABHNQ010000060 (original name was: CABHNQ010000060.1); CABHNQ010000061 (original name was: CABHNQ010000061.1); CABHNQ010000062 (original name was: CABHNQ010000062.1); CABHNQ010000064 (original name was: CABHNQ010000064.1); CABHNQ010000065 (original name was: CABHNQ010000065.1); CABHNQ010000066 (original name was: CABHNQ010000066.1); CABHNQ010000067 (original name was: CABHNQ010000067.1); CABHNQ010000068 (original name was: CABHNQ010000068.1); CABHNQ010000069 (original name was: CABHNQ010000069.1); CABHNQ010000070 (original name was: CABHNQ010000070.1); CABHNQ010000071 (original name was: CABHNQ010000071.1); CABHNQ010000075 (original name was: CABHNQ010000075.1); CABHNQ010000076 (original name was: CABHNQ010000076.1); CABHNQ010000078 (original name was: CABHNQ010000078.1); CABHNQ010000079 (original name was: CABHNQ010000079.1); CABHNQ010000080 (original name was: CABHNQ010000080.1); CABHNQ010000081 (original name was: CABHNQ010000081.1); CABHNQ010000082 (original name was: CABHNQ010000082.1); CABHNQ010000083 (original name was: CABHNQ010000083.1); CABHNQ010000084 (original name was: CABHNQ010000084.1); CABHNQ010000085 (original name was: CABHNQ010000085.1); CABHNQ010000088 (original name was: CABHNQ010000088.1); CABHNQ010000089 (original name was: CABHNQ010000089.1); CABHNQ010000090 (original name was: CABHNQ010000090.1); CABHNQ010000091 (original name was: CABHNQ010000091.1); CABHNQ010000092 (original name was: CABHNQ010000092.1); CABHNQ010000093 (original name was: CABHNQ010000093.1); CABHNQ010000094 (original name was: CABHNQ010000094.1); CABHNQ010000095 (original name was: CABHNQ010000095.1); CABHNQ010000096 (original name was: CABHNQ010000096.1); CABHNQ010000097 (original name was: CABHNQ010000097.1); CABHNQ010000098 (original name was: CABHNQ010000098.1); CABHNQ010000099 (original name was: CABHNQ010000099.1); CABHNQ010000100 (original name was: CABHNQ010000100.1); CABHNQ010000101 (original name was: CABHNQ010000101.1); CABHNQ010000102 (original name was: CABHNQ010000102.1)

Compact view

c00003_CABHNQ0.. - Region 1 - Pyruvate2acetate-formate

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Location: 642 - 24,019 nt. (total: 23,378 nt) Show pHMM detection rules used

Pyruvate2acetate-formate: ((PFL_acetate1 or PFL_acetate2) and Radical_SAM)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

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Gene details

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KnownClusterBlast

Similar known gene clusters

c00038_CABHNQ0.. - Region 1 - Fumarate2succinate

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Location: 1 - 20,565 nt. (total: 20,565 nt) Show pHMM detection rules used

Region on contig edge.

Fumarate2succinate: (Succ_DH_flav_C and FAD_binding_2 and (Fer2_3 or Fer4_7 or SucD_FumR))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

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Gene details

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KnownClusterBlast

Similar known gene clusters

c00076_CABHNQ0.. - Region 1 - Others_HGD_unassigned

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Location: 19,416 - 44,270 nt. (total: 24,855 nt) Show pHMM detection rules used

Others_HGD_unassigned: (minimum(1, [HAAA1, HG2B1, HG2B2, HGD-D, HleuD1, HleuD2, HleuS1, HleuS2, Lactoyl-CoA1, Lactoyl-CoA2]) and minimum(1, [ACP_syn_III, ACP_syn_III_C, AcetylCoA_hyd_C, AcetylCoA_hydro, Acyl-CoA_dh_1, Acyl-CoA_dh_2, AdoHcyase_NAD, AlaDh_PNT_C, BcrAD_BadFG, Biotin_lipoyl, Carboxyl_trans, CoA_trans, CoA_trans_230_acto, CoA_trans_6_Glutaconate, CoA_transf_3, ECH_1, ECH_2, ETF, ETF_alpha, FGGY_C, HCDH, HCDH_N, Hacid_dh, Hacid_dh_C, Mal_decarbox_Al, Peptidase_M22, Peptidase_M23, Thiolase_C, Thiolase_N, ketoacyl-synt]) and not (minimum(2, [AcetylCoA_hyd_C, BcrAD_BadFG, CoA_trans, CoA_trans_230_acto, Mal_decarbox_Al]) and Lactoyl-CoA2 and Lactoyl-CoA1) and not (minimum(4, [ACP_syn_III, ACP_syn_III_C, Acyl-CoA_dh_1, Acyl-CoA_dh_2, AlaDh_PNT_C, BcrAD_BadFG, ECH_1, ECH_2, ETF, ETF_alpha, HCDH, HCDH_N, Hacid_dh, Hacid_dh_C, IlvN, NAD_Gly3P_dh_N, Thiolase_C, Thiolase_N, ketoacyl-synt]) and HAAA1 and not HleuS1))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

No matches found.