GCA_905071895.1 - 4 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

CAJHJS010000002 (original name was: CAJHJS010000002.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 2.1	RiPP-like	121,316	140,152

CAJHJS010000004 (original name was: CAJHJS010000004.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 4.1	T3PKS	80,833	121,999

CAJHJS010000006 (original name was: CAJHJS010000006.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 6.1	RiPP-like	75,498	87,594	asukamycin	Polyketide:Type II	3%

CAJHJS010000009 (original name was: CAJHJS010000009.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 9.1	lanthipeptide-class-ii	53,494	76,280	macedocin	RiPP:Lanthipeptide	78%

Region	Type	From	To	Most similar known cluster	Similarity
Region 2.1	RiPP-like	121,316	140,152
Region 4.1	T3PKS	80,833	121,999
Region 6.1	RiPP-like	75,498	87,594	asukamycin	Polyketide:Type II	3%
Region 9.1	lanthipeptide-class-ii	53,494	76,280	macedocin	RiPP:Lanthipeptide	78%

Compact view

c00002_CAJHJS0.. - Region 1 - RiPP-like

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Location: 121,316 - 140,152 nt. (total: 18,837 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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KnownClusterBlast

Similar known gene clusters

No matches found.

c00004_CAJHJS0.. - Region 1 - T3PKS

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Location: 80,833 - 121,999 nt. (total: 41,167 nt) Show pHMM detection rules used

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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KnownClusterBlast

Similar known gene clusters

No matches found.

c00006_CAJHJS0.. - Region 1 - RiPP-like

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Location: 75,498 - 87,594 nt. (total: 12,097 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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KnownClusterBlast

Similar known gene clusters

c00009_CAJHJS0.. - Region 1 - lanthipeptide-class-ii

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Location: 53,494 - 76,280 nt. (total: 22,787 nt) Show pHMM detection rules used

lanthipeptide-class-ii: cds(LANC_like and DUF4135)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Lanthipeptides

KnownClusterBlast

Lanthipeptide predictions

Lanthipeptide(s) for ctg9_36 - Putative Class II

ctg9_33 leader / core peptide: MKKETTIIESIQEVSLEELDQIIGA - GKNGVFKDhbIDhaHECHLNDhbWAFLADhbCCDha
ctg9_34 leader / core peptide: MEKETTIIESIQEVSLEELDQIIGA - GKNGVFKDhbIDhaHECHLNDhbWAFLADhbCCDha
ctg9_35 leader / core peptide: MKNNNKICQDALESLQELKLEEVDELLGG - AGHGVNDhbIDhaAECRWNDhaLQAIFDhaCC
allorf_72396_72584 leader / core peptide: MIKKECINAEANVGYKDFQTCYDSIFKYIEGFYNSRRRHSKLGS - DhaNRRALAFNFPPKMCPKY
allorf_72861_73019 leader / core peptide: MSLINRIVNKLLTFVLNYTQSSNEGG - DKDhbAKHRNFCVNLIKDhaELFLVDhbFDhaNI

Legend:

Dha: Didehydroalanine
Dhb: Didehydrobutyrine

Similar known gene clusters

Lanthipeptides

Core peptide predictions

ctg9_33 - Class II

Cleavage pHMM score: 5.20

RODEO score: 0

Monoisotopic mass: 2776.3 Da

Molecular weight: 2778.2 Da

Number of bridges: 3

Alternative weights: (assuming N unmodified Ser/Thr residues); 2796.2 Da N = 1; 2814.2 Da N = 2

ctg9_34 - Class II

Cleavage pHMM score: 5.20

RODEO score: 0

Monoisotopic mass: 2776.3 Da

Molecular weight: 2778.2 Da

Number of bridges: 3

Alternative weights: (assuming N unmodified Ser/Thr residues); 2796.2 Da N = 1; 2814.2 Da N = 2

ctg9_35 - Class II

Cleavage pHMM score: 0.40

RODEO score: 0

Monoisotopic mass: 2494.2 Da

Molecular weight: 2495.8 Da

Number of bridges: 3

Alternative weights: (assuming N unmodified Ser/Thr residues); 2513.8 Da N = 1

allorf_72396_72584 - Class II

Cleavage pHMM score: -5.40

RODEO score: 0

Monoisotopic mass: 2121.1 Da

Molecular weight: 2122.5 Da

Number of bridges: 1

allorf_72861_73019 - Class II

Cleavage pHMM score: -7.20

RODEO score: 0

Monoisotopic mass: 2964.6 Da

Molecular weight: 2966.4 Da

Number of bridges: 1

Alternative weights: (assuming N unmodified Ser/Thr residues); 2984.5 Da N = 1; 3002.5 Da N = 2; 3020.5 Da N = 3