GCA_905187955.1 - 3 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

CAJJJZ010000001 (original name was: CAJJJZ010000001.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 1.1	T3PKS	304,697	345,860

CAJJJZ010000005 (original name was: CAJJJZ010000005.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 5.1	lanthipeptide-class-i	77,123	103,089	nisin Q	RiPP:Lanthipeptide	63%
Region 5.2	RiPP-like	116,003	126,418	salivaricin CRL1328 α peptide / salivaricin CRL1328 β peptide	RiPP	66%

Region	Type	From	To	Most similar known cluster	Similarity
Region 1.1	T3PKS	304,697	345,860
Region 5.1	lanthipeptide-class-i	77,123	103,089	nisin Q	RiPP:Lanthipeptide	63%
Region 5.2	RiPP-like	116,003	126,418	salivaricin CRL1328 α peptide / salivaricin CRL1328 β peptide	RiPP	66%

No secondary metabolite regions were found in these records:: CAJJJZ010000002 (original name was: CAJJJZ010000002.1); CAJJJZ010000003 (original name was: CAJJJZ010000003.1); CAJJJZ010000004 (original name was: CAJJJZ010000004.1); CAJJJZ010000006 (original name was: CAJJJZ010000006.1); CAJJJZ010000007 (original name was: CAJJJZ010000007.1); CAJJJZ010000008 (original name was: CAJJJZ010000008.1); CAJJJZ010000009 (original name was: CAJJJZ010000009.1); CAJJJZ010000010 (original name was: CAJJJZ010000010.1); CAJJJZ010000011 (original name was: CAJJJZ010000011.1); CAJJJZ010000012 (original name was: CAJJJZ010000012.1); CAJJJZ010000013 (original name was: CAJJJZ010000013.1); CAJJJZ010000014 (original name was: CAJJJZ010000014.1); CAJJJZ010000015 (original name was: CAJJJZ010000015.1); CAJJJZ010000016 (original name was: CAJJJZ010000016.1); CAJJJZ010000017 (original name was: CAJJJZ010000017.1); CAJJJZ010000018 (original name was: CAJJJZ010000018.1); CAJJJZ010000019 (original name was: CAJJJZ010000019.1); CAJJJZ010000020 (original name was: CAJJJZ010000020.1); CAJJJZ010000021 (original name was: CAJJJZ010000021.1); CAJJJZ010000022 (original name was: CAJJJZ010000022.1); CAJJJZ010000023 (original name was: CAJJJZ010000023.1); CAJJJZ010000024 (original name was: CAJJJZ010000024.1); CAJJJZ010000025 (original name was: CAJJJZ010000025.1); CAJJJZ010000026 (original name was: CAJJJZ010000026.1); CAJJJZ010000027 (original name was: CAJJJZ010000027.1); CAJJJZ010000028 (original name was: CAJJJZ010000028.1); CAJJJZ010000029 (original name was: CAJJJZ010000029.1); CAJJJZ010000030 (original name was: CAJJJZ010000030.1); CAJJJZ010000031 (original name was: CAJJJZ010000031.1)

Compact view

c00001_CAJJJZ0.. - Region 1 - T3PKS

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Location: 304,697 - 345,860 nt. (total: 41,164 nt) Show pHMM detection rules used

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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KnownClusterBlast

Similar known gene clusters

No matches found.

c00005_CAJJJZ0.. - Region 1 - lanthipeptide-class-i

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Location: 77,123 - 103,089 nt. (total: 25,967 nt) Show pHMM detection rules used

lanthipeptide-class-i: ((LANC_like and (Lant_dehydr_N or Lant_dehydr_C)) and not (YcaO or TIGR03882))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Lanthipeptides

KnownClusterBlast

Lanthipeptide predictions

Lanthipeptide(s) for ctg5_85 - Putative Class I

ctg5_86 leader / core peptide: MSVNDFKLDLVKVSKESTNSNYSVK - IDhbDhaYDhaLCDhbPGCKDhbGALMGCDhbMKDhbADhaCGCHVHIDhaK

Legend:

Dha: Didehydroalanine
Dhb: Didehydrobutyrine

Similar known gene clusters

Lanthipeptides

Core peptide predictions

ctg5_86 - Class I

Cleavage pHMM score: 12.40

RODEO score: 26

Monoisotopic mass: 3326.6 Da

Molecular weight: 3329.0 Da

Number of bridges: 5

Alternative weights: (assuming N unmodified Ser/Thr residues); 3347.0 Da N = 1; 3365.0 Da N = 2; 3383.0 Da N = 3; 3401.1 Da N = 4

c00005_CAJJJZ0.. - Region 2 - RiPP-like

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Location: 116,003 - 126,418 nt. (total: 10,416 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters