GCA_905312035.1 - 4 region(s)

Identified primary metabolite regions

CAJNQA010000001 (original name was: CAJNQA010000001.1)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 1.1	fatty_acids-unassigned	Putative	142,818	166,054	Acetate to butyrate C. sporogenes	BUT	50%

CAJNQA010000002 (original name was: CAJNQA010000002.1)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 2.1	Putrescine2spermidine	Aliphatic_amine	30,044	50,874	Arginine2putrescine R. gnavus	PUTR	40%

CAJNQA010000004 (original name was: CAJNQA010000004.1)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 4.1	Fumarate2succinate,TPP_fatty_acids,TPP_AA_metabolism	Putative	54,267	88,672	Acetate to butyrate C. sporogenes	BUT	33%

CAJNQA010000036 (original name was: CAJNQA010000036.1)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 36.1	fatty_acids-unassigned	Putative	1,873	27,308	Acetate to butyrate C. sporogenes	BUT	33%

No primary metabolite regions were found in these records:: CAJNQA010000003 (original name was: CAJNQA010000003.1); CAJNQA010000005 (original name was: CAJNQA010000005.1); CAJNQA010000006 (original name was: CAJNQA010000006.1); CAJNQA010000007 (original name was: CAJNQA010000007.1); CAJNQA010000008 (original name was: CAJNQA010000008.1); CAJNQA010000009 (original name was: CAJNQA010000009.1); CAJNQA010000010 (original name was: CAJNQA010000010.1); CAJNQA010000011 (original name was: CAJNQA010000011.1); CAJNQA010000012 (original name was: CAJNQA010000012.1); CAJNQA010000013 (original name was: CAJNQA010000013.1); CAJNQA010000014 (original name was: CAJNQA010000014.1); CAJNQA010000015 (original name was: CAJNQA010000015.1); CAJNQA010000016 (original name was: CAJNQA010000016.1); CAJNQA010000017 (original name was: CAJNQA010000017.1); CAJNQA010000018 (original name was: CAJNQA010000018.1); CAJNQA010000019 (original name was: CAJNQA010000019.1); CAJNQA010000020 (original name was: CAJNQA010000020.1); CAJNQA010000021 (original name was: CAJNQA010000021.1); CAJNQA010000022 (original name was: CAJNQA010000022.1); CAJNQA010000023 (original name was: CAJNQA010000023.1); CAJNQA010000024 (original name was: CAJNQA010000024.1); CAJNQA010000025 (original name was: CAJNQA010000025.1); CAJNQA010000026 (original name was: CAJNQA010000026.1); CAJNQA010000027 (original name was: CAJNQA010000027.1); CAJNQA010000028 (original name was: CAJNQA010000028.1); CAJNQA010000029 (original name was: CAJNQA010000029.1); CAJNQA010000030 (original name was: CAJNQA010000030.1); CAJNQA010000031 (original name was: CAJNQA010000031.1); CAJNQA010000032 (original name was: CAJNQA010000032.1); CAJNQA010000033 (original name was: CAJNQA010000033.1); CAJNQA010000034 (original name was: CAJNQA010000034.1); CAJNQA010000035 (original name was: CAJNQA010000035.1); CAJNQA010000037 (original name was: CAJNQA010000037.1); CAJNQA010000038 (original name was: CAJNQA010000038.1); CAJNQA010000039 (original name was: CAJNQA010000039.1); CAJNQA010000040 (original name was: CAJNQA010000040.1); CAJNQA010000041 (original name was: CAJNQA010000041.1); CAJNQA010000042 (original name was: CAJNQA010000042.1); CAJNQA010000043 (original name was: CAJNQA010000043.1); CAJNQA010000044 (original name was: CAJNQA010000044.1); CAJNQA010000045 (original name was: CAJNQA010000045.1); CAJNQA010000046 (original name was: CAJNQA010000046.1); CAJNQA010000047 (original name was: CAJNQA010000047.1); CAJNQA010000048 (original name was: CAJNQA010000048.1); CAJNQA010000049 (original name was: CAJNQA010000049.1); CAJNQA010000050 (original name was: CAJNQA010000050.1); CAJNQA010000051 (original name was: CAJNQA010000051.1); CAJNQA010000052 (original name was: CAJNQA010000052.1); CAJNQA010000053 (original name was: CAJNQA010000053.1); CAJNQA010000054 (original name was: CAJNQA010000054.1); CAJNQA010000055 (original name was: CAJNQA010000055.1); CAJNQA010000056 (original name was: CAJNQA010000056.1); CAJNQA010000057 (original name was: CAJNQA010000057.1); CAJNQA010000058 (original name was: CAJNQA010000058.1); CAJNQA010000059 (original name was: CAJNQA010000059.1); CAJNQA010000060 (original name was: CAJNQA010000060.1); CAJNQA010000061 (original name was: CAJNQA010000061.1); CAJNQA010000062 (original name was: CAJNQA010000062.1); CAJNQA010000063 (original name was: CAJNQA010000063.1); CAJNQA010000064 (original name was: CAJNQA010000064.1); CAJNQA010000065 (original name was: CAJNQA010000065.1); CAJNQA010000066 (original name was: CAJNQA010000066.1); CAJNQA010000067 (original name was: CAJNQA010000067.1); CAJNQA010000068 (original name was: CAJNQA010000068.1); CAJNQA010000069 (original name was: CAJNQA010000069.1); CAJNQA010000070 (original name was: CAJNQA010000070.1); CAJNQA010000071 (original name was: CAJNQA010000071.1); CAJNQA010000072 (original name was: CAJNQA010000072.1); CAJNQA010000073 (original name was: CAJNQA010000073.1); CAJNQA010000074 (original name was: CAJNQA010000074.1); CAJNQA010000075 (original name was: CAJNQA010000075.1); CAJNQA010000076 (original name was: CAJNQA010000076.1); CAJNQA010000077 (original name was: CAJNQA010000077.1); CAJNQA010000078 (original name was: CAJNQA010000078.1); CAJNQA010000079 (original name was: CAJNQA010000079.1); CAJNQA010000080 (original name was: CAJNQA010000080.1); CAJNQA010000081 (original name was: CAJNQA010000081.1); CAJNQA010000082 (original name was: CAJNQA010000082.1); CAJNQA010000083 (original name was: CAJNQA010000083.1); CAJNQA010000084 (original name was: CAJNQA010000084.1); CAJNQA010000085 (original name was: CAJNQA010000085.1); CAJNQA010000086 (original name was: CAJNQA010000086.1); CAJNQA010000087 (original name was: CAJNQA010000087.1); CAJNQA010000088 (original name was: CAJNQA010000088.1); CAJNQA010000089 (original name was: CAJNQA010000089.1); CAJNQA010000090 (original name was: CAJNQA010000090.1); CAJNQA010000091 (original name was: CAJNQA010000091.1); CAJNQA010000092 (original name was: CAJNQA010000092.1); CAJNQA010000093 (original name was: CAJNQA010000093.1); CAJNQA010000094 (original name was: CAJNQA010000094.1); CAJNQA010000095 (original name was: CAJNQA010000095.1); CAJNQA010000096 (original name was: CAJNQA010000096.1); CAJNQA010000097 (original name was: CAJNQA010000097.1); CAJNQA010000098 (original name was: CAJNQA010000098.1); CAJNQA010000099 (original name was: CAJNQA010000099.1); CAJNQA010000100 (original name was: CAJNQA010000100.1); CAJNQA010000101 (original name was: CAJNQA010000101.1); CAJNQA010000102 (original name was: CAJNQA010000102.1); CAJNQA010000103 (original name was: CAJNQA010000103.1); CAJNQA010000104 (original name was: CAJNQA010000104.1); CAJNQA010000105 (original name was: CAJNQA010000105.1); CAJNQA010000106 (original name was: CAJNQA010000106.1); CAJNQA010000107 (original name was: CAJNQA010000107.1); CAJNQA010000108 (original name was: CAJNQA010000108.1); CAJNQA010000109 (original name was: CAJNQA010000109.1); CAJNQA010000110 (original name was: CAJNQA010000110.1); CAJNQA010000111 (original name was: CAJNQA010000111.1); CAJNQA010000112 (original name was: CAJNQA010000112.1); CAJNQA010000113 (original name was: CAJNQA010000113.1); CAJNQA010000114 (original name was: CAJNQA010000114.1)

Compact view

c00001_CAJNQA0.. - Region 1 - fatty_acids-unassigned

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Location: 142,818 - 166,054 nt. (total: 23,237 nt) Show pHMM detection rules used

fatty_acids-unassigned: (not (EC1_2-faecali or baiH or baiCD or ECH1_Enoyl_CoA_DH1 or ECH1_Enoyl_CoA_DH2 or ECH1_Enoyl_CoA_DH3 or ECH1_Enoyl_CoA_DH4 or POR or POR_N or PFOR_II) and minimum(4, [AcetylCoA_hyd_C, Acyl-CoA_dh_1, Acyl-CoA_dh_2, EC1_2-faecali, ECH1_8_CARC, ECH_1, ECH_2, HBT, HCDH, HCDH_N, Thiolase_C, Thiolase_N, ketoacyl-synt]))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

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Gene details

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KnownClusterBlast

Similar known gene clusters

c00002_CAJNQA0.. - Region 1 - Putrescine2spermidine

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Location: 30,044 - 50,874 nt. (total: 20,831 nt) Show pHMM detection rules used

Putrescine2spermidine: (minimum(2, [AdoMet_dc, Spermine_synt_N, Spermine_synth]) or (Orn_DAP_Arg_deC and Sacchrp_dh_C))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

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Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

c00004_CAJNQA0.. - Region 1 - Fumarate2succinate,TPP_AA_metabolism,TPP_fatty_acids

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Location: 54,267 - 88,672 nt. (total: 34,406 nt) Show pHMM detection rules used

Fumarate2succinate: (Succ_DH_flav_C and FAD_binding_2 and (Fer2_3 or Fer4_7 or SucD_FumR))
TPP_fatty_acids: (TPP_enzyme_C and (minimum(2, [ACD1_car, ACP_syn_III_C, AcetylCoA_hyd_C, AcetylCoA_hydro, Acyl-CoA_dh_1, Acyl-CoA_dh_2, Butyrate_kinase, CT_Propionyl_CoA1, CT_Propionyl_CoA2, CT_Propionyl_CoA3, Carboxyl_trans, CoA_trans, CoA_trans_230_acto, CoA_trans_2_CAF, CoA_trans_6_Glutaconate, E1_dh, ECH_1, ECH_2, HBT, HBT_2, HCDH, HpaB, Ketoacyl-synt_C, Thiolase_C, Thiolase_N, adh_short, adh_short_C2]) or FA_synthesis) and not (PFL-like or PFL_6_pcresol or PFL_9_tma or Gly_radical or Gly_430_pcre or PFL_acetate1 or PFL_acetate2 or Gly_radical_scatole or PFL_proline or PFL_toluene) and not (POR or POR_N))
TPP_AA_metabolism: (TPP_enzyme_C and not (PFL-like or PFL_6_pcresol or PFL_9_tma or Gly_radical or Gly_430_pcre or Gly_8-9_TMA or PFL_acetate1 or PFL_acetate2 or Gly_radical_scatole or PFL_proline or PFL_toluene) and minimum(2, [ALS_ss_C, AlaDh_PNT_C, Arginase, BKACE, BcrAD_BadFG, Beta_elim_lyase, CPSase_L_D2, Cys_Met_Meta_PP, ELFV_dehydrog, GRDB, Glu_syn_central, Glu_synthase, Gly_reductase, HAAA1, HG2B1, HG2B2, HGD-D, HleuD1, HleuD2, HleuS1, HleuS2, Homoserine_dh, ILVD_EDD, IlvC, Lactoyl-CoA1, Lactoyl-CoA2, Lyase_aromatic, MAAL_C, OKR_DC_1_5_lysine, OKR_DC_1_5_ornithine, OKR_DC_1_7_arginine, OKR_DC_1_C, OTCace, PALP, Proline_reductase, Sacchrp_dh_C, TPL, Thr_dehydrat_C, TnaA, Urocanase]) and not (POR or POR_N or PFOR_II))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

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Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

c00036_CAJNQA0.. - Region 1 - fatty_acids-unassigned

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Location: 1,873 - 27,308 nt. (total: 25,436 nt) Show pHMM detection rules used

fatty_acids-unassigned: (not (EC1_2-faecali or baiH or baiCD or ECH1_Enoyl_CoA_DH1 or ECH1_Enoyl_CoA_DH2 or ECH1_Enoyl_CoA_DH3 or ECH1_Enoyl_CoA_DH4 or POR or POR_N or PFOR_II) and minimum(4, [AcetylCoA_hyd_C, Acyl-CoA_dh_1, Acyl-CoA_dh_2, EC1_2-faecali, ECH1_8_CARC, ECH_1, ECH_2, HBT, HCDH, HCDH_N, Thiolase_C, Thiolase_N, ketoacyl-synt]))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters