GCA_905371895.1 - 3 region(s)

Identified primary metabolite regions

CAJPNC010000017 (original name was: CAJPNC010000017.1)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 17.1	Pyruvate2acetate-formate	SCFA	1,723	24,973	Pyruvate to acetate-formate E. coli	PFL_acetate	100%

CAJPNC010000020 (original name was: CAJPNC010000020.1)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 20.1	TPP_AA_metabolism	Putative	1	27,569

CAJPNC010000031 (original name was: CAJPNC010000031.1)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 31.1	TPP_fatty_acids	Putative	1	18,259

No primary metabolite regions were found in these records:: CAJPNC010000001 (original name was: CAJPNC010000001.1); CAJPNC010000002 (original name was: CAJPNC010000002.1); CAJPNC010000003 (original name was: CAJPNC010000003.1); CAJPNC010000004 (original name was: CAJPNC010000004.1); CAJPNC010000005 (original name was: CAJPNC010000005.1); CAJPNC010000006 (original name was: CAJPNC010000006.1); CAJPNC010000007 (original name was: CAJPNC010000007.1); CAJPNC010000008 (original name was: CAJPNC010000008.1); CAJPNC010000009 (original name was: CAJPNC010000009.1); CAJPNC010000010 (original name was: CAJPNC010000010.1); CAJPNC010000011 (original name was: CAJPNC010000011.1); CAJPNC010000012 (original name was: CAJPNC010000012.1); CAJPNC010000013 (original name was: CAJPNC010000013.1); CAJPNC010000014 (original name was: CAJPNC010000014.1); CAJPNC010000015 (original name was: CAJPNC010000015.1); CAJPNC010000016 (original name was: CAJPNC010000016.1); CAJPNC010000018 (original name was: CAJPNC010000018.1); CAJPNC010000019 (original name was: CAJPNC010000019.1); CAJPNC010000021 (original name was: CAJPNC010000021.1); CAJPNC010000022 (original name was: CAJPNC010000022.1); CAJPNC010000023 (original name was: CAJPNC010000023.1); CAJPNC010000024 (original name was: CAJPNC010000024.1); CAJPNC010000025 (original name was: CAJPNC010000025.1); CAJPNC010000026 (original name was: CAJPNC010000026.1); CAJPNC010000027 (original name was: CAJPNC010000027.1); CAJPNC010000028 (original name was: CAJPNC010000028.1); CAJPNC010000029 (original name was: CAJPNC010000029.1); CAJPNC010000030 (original name was: CAJPNC010000030.1); CAJPNC010000032 (original name was: CAJPNC010000032.1); CAJPNC010000033 (original name was: CAJPNC010000033.1); CAJPNC010000034 (original name was: CAJPNC010000034.1); CAJPNC010000035 (original name was: CAJPNC010000035.1); CAJPNC010000036 (original name was: CAJPNC010000036.1); CAJPNC010000037 (original name was: CAJPNC010000037.1); CAJPNC010000038 (original name was: CAJPNC010000038.1); CAJPNC010000039 (original name was: CAJPNC010000039.1); CAJPNC010000040 (original name was: CAJPNC010000040.1); CAJPNC010000041 (original name was: CAJPNC010000041.1); CAJPNC010000042 (original name was: CAJPNC010000042.1); CAJPNC010000043 (original name was: CAJPNC010000043.1); CAJPNC010000044 (original name was: CAJPNC010000044.1); CAJPNC010000045 (original name was: CAJPNC010000045.1); CAJPNC010000046 (original name was: CAJPNC010000046.1); CAJPNC010000047 (original name was: CAJPNC010000047.1); CAJPNC010000048 (original name was: CAJPNC010000048.1); CAJPNC010000049 (original name was: CAJPNC010000049.1); CAJPNC010000050 (original name was: CAJPNC010000050.1); CAJPNC010000051 (original name was: CAJPNC010000051.1); CAJPNC010000052 (original name was: CAJPNC010000052.1); CAJPNC010000053 (original name was: CAJPNC010000053.1); CAJPNC010000054 (original name was: CAJPNC010000054.1); CAJPNC010000055 (original name was: CAJPNC010000055.1); CAJPNC010000056 (original name was: CAJPNC010000056.1); CAJPNC010000057 (original name was: CAJPNC010000057.1); CAJPNC010000058 (original name was: CAJPNC010000058.1); CAJPNC010000059 (original name was: CAJPNC010000059.1); CAJPNC010000060 (original name was: CAJPNC010000060.1); CAJPNC010000061 (original name was: CAJPNC010000061.1); CAJPNC010000062 (original name was: CAJPNC010000062.1); CAJPNC010000063 (original name was: CAJPNC010000063.1); CAJPNC010000064 (original name was: CAJPNC010000064.1); CAJPNC010000065 (original name was: CAJPNC010000065.1); CAJPNC010000066 (original name was: CAJPNC010000066.1); CAJPNC010000067 (original name was: CAJPNC010000067.1); CAJPNC010000068 (original name was: CAJPNC010000068.1); CAJPNC010000069 (original name was: CAJPNC010000069.1); CAJPNC010000070 (original name was: CAJPNC010000070.1); CAJPNC010000071 (original name was: CAJPNC010000071.1); CAJPNC010000072 (original name was: CAJPNC010000072.1); CAJPNC010000073 (original name was: CAJPNC010000073.1); CAJPNC010000074 (original name was: CAJPNC010000074.1); CAJPNC010000075 (original name was: CAJPNC010000075.1); CAJPNC010000076 (original name was: CAJPNC010000076.1); CAJPNC010000077 (original name was: CAJPNC010000077.1); CAJPNC010000078 (original name was: CAJPNC010000078.1); CAJPNC010000079 (original name was: CAJPNC010000079.1); CAJPNC010000080 (original name was: CAJPNC010000080.1); CAJPNC010000081 (original name was: CAJPNC010000081.1); CAJPNC010000082 (original name was: CAJPNC010000082.1); CAJPNC010000083 (original name was: CAJPNC010000083.1); CAJPNC010000084 (original name was: CAJPNC010000084.1); CAJPNC010000085 (original name was: CAJPNC010000085.1); CAJPNC010000086 (original name was: CAJPNC010000086.1); CAJPNC010000087 (original name was: CAJPNC010000087.1); CAJPNC010000088 (original name was: CAJPNC010000088.1); CAJPNC010000089 (original name was: CAJPNC010000089.1); CAJPNC010000090 (original name was: CAJPNC010000090.1); CAJPNC010000091 (original name was: CAJPNC010000091.1); CAJPNC010000092 (original name was: CAJPNC010000092.1); CAJPNC010000093 (original name was: CAJPNC010000093.1); CAJPNC010000094 (original name was: CAJPNC010000094.1); CAJPNC010000095 (original name was: CAJPNC010000095.1); CAJPNC010000096 (original name was: CAJPNC010000096.1); CAJPNC010000097 (original name was: CAJPNC010000097.1); CAJPNC010000098 (original name was: CAJPNC010000098.1); CAJPNC010000099 (original name was: CAJPNC010000099.1); CAJPNC010000100 (original name was: CAJPNC010000100.1); CAJPNC010000101 (original name was: CAJPNC010000101.1); CAJPNC010000102 (original name was: CAJPNC010000102.1); CAJPNC010000103 (original name was: CAJPNC010000103.1); CAJPNC010000104 (original name was: CAJPNC010000104.1); CAJPNC010000105 (original name was: CAJPNC010000105.1); CAJPNC010000106 (original name was: CAJPNC010000106.1); CAJPNC010000107 (original name was: CAJPNC010000107.1); CAJPNC010000108 (original name was: CAJPNC010000108.1); CAJPNC010000109 (original name was: CAJPNC010000109.1); CAJPNC010000110 (original name was: CAJPNC010000110.1); CAJPNC010000111 (original name was: CAJPNC010000111.1); CAJPNC010000112 (original name was: CAJPNC010000112.1); CAJPNC010000113 (original name was: CAJPNC010000113.1); CAJPNC010000114 (original name was: CAJPNC010000114.1); CAJPNC010000115 (original name was: CAJPNC010000115.1); CAJPNC010000116 (original name was: CAJPNC010000116.1); CAJPNC010000117 (original name was: CAJPNC010000117.1); CAJPNC010000118 (original name was: CAJPNC010000118.1); CAJPNC010000119 (original name was: CAJPNC010000119.1); CAJPNC010000120 (original name was: CAJPNC010000120.1); CAJPNC010000121 (original name was: CAJPNC010000121.1); CAJPNC010000122 (original name was: CAJPNC010000122.1); CAJPNC010000123 (original name was: CAJPNC010000123.1); CAJPNC010000124 (original name was: CAJPNC010000124.1); CAJPNC010000125 (original name was: CAJPNC010000125.1); CAJPNC010000126 (original name was: CAJPNC010000126.1); CAJPNC010000127 (original name was: CAJPNC010000127.1); CAJPNC010000128 (original name was: CAJPNC010000128.1); CAJPNC010000129 (original name was: CAJPNC010000129.1); CAJPNC010000130 (original name was: CAJPNC010000130.1); CAJPNC010000131 (original name was: CAJPNC010000131.1); CAJPNC010000132 (original name was: CAJPNC010000132.1); CAJPNC010000133 (original name was: CAJPNC010000133.1); CAJPNC010000134 (original name was: CAJPNC010000134.1); CAJPNC010000135 (original name was: CAJPNC010000135.1); CAJPNC010000136 (original name was: CAJPNC010000136.1); CAJPNC010000137 (original name was: CAJPNC010000137.1); CAJPNC010000138 (original name was: CAJPNC010000138.1); CAJPNC010000139 (original name was: CAJPNC010000139.1); CAJPNC010000140 (original name was: CAJPNC010000140.1); CAJPNC010000141 (original name was: CAJPNC010000141.1); CAJPNC010000142 (original name was: CAJPNC010000142.1); CAJPNC010000143 (original name was: CAJPNC010000143.1); CAJPNC010000144 (original name was: CAJPNC010000144.1); CAJPNC010000145 (original name was: CAJPNC010000145.1); CAJPNC010000146 (original name was: CAJPNC010000146.1); CAJPNC010000147 (original name was: CAJPNC010000147.1); CAJPNC010000148 (original name was: CAJPNC010000148.1); CAJPNC010000149 (original name was: CAJPNC010000149.1); CAJPNC010000150 (original name was: CAJPNC010000150.1); CAJPNC010000151 (original name was: CAJPNC010000151.1); CAJPNC010000152 (original name was: CAJPNC010000152.1); CAJPNC010000153 (original name was: CAJPNC010000153.1); CAJPNC010000154 (original name was: CAJPNC010000154.1); CAJPNC010000155 (original name was: CAJPNC010000155.1); CAJPNC010000156 (original name was: CAJPNC010000156.1); CAJPNC010000157 (original name was: CAJPNC010000157.1); CAJPNC010000158 (original name was: CAJPNC010000158.1); CAJPNC010000159 (original name was: CAJPNC010000159.1); CAJPNC010000160 (original name was: CAJPNC010000160.1); CAJPNC010000161 (original name was: CAJPNC010000161.1); CAJPNC010000162 (original name was: CAJPNC010000162.1); CAJPNC010000163 (original name was: CAJPNC010000163.1); CAJPNC010000164 (original name was: CAJPNC010000164.1); CAJPNC010000165 (original name was: CAJPNC010000165.1); CAJPNC010000166 (original name was: CAJPNC010000166.1); CAJPNC010000167 (original name was: CAJPNC010000167.1); CAJPNC010000168 (original name was: CAJPNC010000168.1); CAJPNC010000169 (original name was: CAJPNC010000169.1); CAJPNC010000170 (original name was: CAJPNC010000170.1); CAJPNC010000171 (original name was: CAJPNC010000171.1); CAJPNC010000172 (original name was: CAJPNC010000172.1); CAJPNC010000173 (original name was: CAJPNC010000173.1); CAJPNC010000174 (original name was: CAJPNC010000174.1); CAJPNC010000175 (original name was: CAJPNC010000175.1); CAJPNC010000176 (original name was: CAJPNC010000176.1); CAJPNC010000177 (original name was: CAJPNC010000177.1); CAJPNC010000178 (original name was: CAJPNC010000178.1); CAJPNC010000179 (original name was: CAJPNC010000179.1); CAJPNC010000180 (original name was: CAJPNC010000180.1); CAJPNC010000181 (original name was: CAJPNC010000181.1); CAJPNC010000182 (original name was: CAJPNC010000182.1); CAJPNC010000183 (original name was: CAJPNC010000183.1); CAJPNC010000184 (original name was: CAJPNC010000184.1); CAJPNC010000185 (original name was: CAJPNC010000185.1); CAJPNC010000186 (original name was: CAJPNC010000186.1); CAJPNC010000187 (original name was: CAJPNC010000187.1); CAJPNC010000188 (original name was: CAJPNC010000188.1); CAJPNC010000189 (original name was: CAJPNC010000189.1); CAJPNC010000190 (original name was: CAJPNC010000190.1); CAJPNC010000191 (original name was: CAJPNC010000191.1); CAJPNC010000192 (original name was: CAJPNC010000192.1); CAJPNC010000193 (original name was: CAJPNC010000193.1); CAJPNC010000194 (original name was: CAJPNC010000194.1); CAJPNC010000195 (original name was: CAJPNC010000195.1); CAJPNC010000196 (original name was: CAJPNC010000196.1); CAJPNC010000197 (original name was: CAJPNC010000197.1); CAJPNC010000198 (original name was: CAJPNC010000198.1); CAJPNC010000199 (original name was: CAJPNC010000199.1); CAJPNC010000200 (original name was: CAJPNC010000200.1); CAJPNC010000201 (original name was: CAJPNC010000201.1); CAJPNC010000202 (original name was: CAJPNC010000202.1); CAJPNC010000203 (original name was: CAJPNC010000203.1); CAJPNC010000204 (original name was: CAJPNC010000204.1); CAJPNC010000205 (original name was: CAJPNC010000205.1)

Compact view

c00017_CAJPNC0.. - Region 1 - Pyruvate2acetate-formate

Download region GenBank file

Location: 1,723 - 24,973 nt. (total: 23,251 nt) Show pHMM detection rules used

Pyruvate2acetate-formate: ((PFL_acetate1 or PFL_acetate2) and Radical_SAM)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

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Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

c00020_CAJPNC0.. - Region 1 - TPP_AA_metabolism

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Location: 1 - 27,569 nt. (total: 27,569 nt) Show pHMM detection rules used

Region on contig edge.

TPP_AA_metabolism: (TPP_enzyme_C and not (PFL-like or PFL_6_pcresol or PFL_9_tma or Gly_radical or Gly_430_pcre or Gly_8-9_TMA or PFL_acetate1 or PFL_acetate2 or Gly_radical_scatole or PFL_proline or PFL_toluene) and minimum(2, [ALS_ss_C, AlaDh_PNT_C, Arginase, BKACE, BcrAD_BadFG, Beta_elim_lyase, CPSase_L_D2, Cys_Met_Meta_PP, ELFV_dehydrog, GRDB, Glu_syn_central, Glu_synthase, Gly_reductase, HAAA1, HG2B1, HG2B2, HGD-D, HleuD1, HleuD2, HleuS1, HleuS2, Homoserine_dh, ILVD_EDD, IlvC, Lactoyl-CoA1, Lactoyl-CoA2, Lyase_aromatic, MAAL_C, OKR_DC_1_5_lysine, OKR_DC_1_5_ornithine, OKR_DC_1_7_arginine, OKR_DC_1_C, OTCace, PALP, Proline_reductase, Sacchrp_dh_C, TPL, Thr_dehydrat_C, TnaA, Urocanase]) and not (POR or POR_N or PFOR_II))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

No matches found.

c00031_CAJPNC0.. - Region 1 - TPP_fatty_acids

Download region GenBank file

Location: 1 - 18,259 nt. (total: 18,259 nt) Show pHMM detection rules used

Region on contig edge.

TPP_fatty_acids: (TPP_enzyme_C and (minimum(2, [ACD1_car, ACP_syn_III_C, AcetylCoA_hyd_C, AcetylCoA_hydro, Acyl-CoA_dh_1, Acyl-CoA_dh_2, Butyrate_kinase, CT_Propionyl_CoA1, CT_Propionyl_CoA2, CT_Propionyl_CoA3, Carboxyl_trans, CoA_trans, CoA_trans_230_acto, CoA_trans_2_CAF, CoA_trans_6_Glutaconate, E1_dh, ECH_1, ECH_2, HBT, HBT_2, HCDH, HpaB, Ketoacyl-synt_C, Thiolase_C, Thiolase_N, adh_short, adh_short_C2]) or FA_synthesis) and not (PFL-like or PFL_6_pcresol or PFL_9_tma or Gly_radical or Gly_430_pcre or PFL_acetate1 or PFL_acetate2 or Gly_radical_scatole or PFL_proline or PFL_toluene) and not (POR or POR_N))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

No matches found.