GCA_913248045.1 - 2 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

CAJYCD010000001 (original name was: CAJYCD010000001.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 1.1	lanthipeptide-class-iv	759,562	782,219
Region 1.2	NRPS-like	1,033,023	1,076,034

Region	Type	From	To	Most similar known cluster	Similarity
Region 1.1	lanthipeptide-class-iv	759,562	782,219
Region 1.2	NRPS-like	1,033,023	1,076,034

Compact view

c00001_CAJYCD0.. - Region 1 - lanthipeptide-class-iv

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Location: 759,562 - 782,219 nt. (total: 22,658 nt) Show pHMM detection rules used

lanthipeptide-class-iv: (cds(LANC_like and Pkinase) and not micKC)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Lanthipeptides

KnownClusterBlast

Lanthipeptide predictions

Lanthipeptides - No core peptides found.

Similar known gene clusters

No matches found.

Lanthipeptides

Core peptide predictions

No core peptides found.

c00001_CAJYCD0.. - Region 2 - NRPS-like

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Location: 1,033,023 - 1,076,034 nt. (total: 43,012 nt) Show pHMM detection rules used

NRPS-like: cds((PP-binding or NAD_binding_4) and (AMP-binding or A-OX))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

NRPS/PKS domains

KnownClusterBlast

Detailed domain annotation

Selected features only

Show module domains

Similar known gene clusters

No matches found.

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 2, location 1033022 - 1076034:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (X)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

ctg1_917

Search NORINE for peptide: strict or relaxed

AMP-binding (14..381): X

NRPSPredictor2: gly, ala

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: gly, ala, val, leu, ile, abu, iva
Small clusters prediction:: gly, ala
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DfftIGiIYK
Nearest Stachelhaus code:: leu
Stachelhaus code match:: 60% (weak)