Probiotic potential risk score
| ARGs (CARD) | VFs (VFDB) | PGs (PHI-base) | PPRS |
|---|---|---|---|
| 22 | 135 | 310 | 338.83 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| ARO accession | ARO name | Identity | Coverage | CARD name | Accession no. |
|---|---|---|---|---|---|
| ARO:3003922 | oqxA | 100.00 | 100.00 | oqxA | EU370913.1 |
| ARO:3004580 | Klebsiella pneumoniae KpnE | 100.00 | 100.00 | Kpne_KpnE | AP006725.1 |
| ARO:3004583 | Klebsiella pneumoniae KpnF | 100.00 | 100.00 | Kpne_KpnF | AP006725.1 |
| ARO:3005049 | CrcB | 100.00 | 100.00 | CrcB | HF536482.1 |
| ARO:3005059 | LptD | 100.00 | 100.00 | LptD | CP007727.1 |
| ARO:3003923 | oqxB | 99.81 | 100.00 | oqxB | EU370913.1 |
| ARO:3004588 | Klebsiella pneumoniae KpnG | 99.74 | 100.00 | Kpne_KpnG | ACWO01000051.1 |
| ARO:3005044 | OmpA | 99.72 | 95.19 | OmpA | FO834906.1 |
| ARO:3005047 | eptB | 99.46 | 97.04 | eptB | FO203501.1 |
| ARO:3004111 | FosA6 | 99.28 | 100.00 | FosA6 | KU254579.1 |
| ARO:3005053 | ArnT | 99.27 | 100.00 | ArnT | FO834906.1 |
| ARO:3000518 | CRP | 99.05 | 100.00 | CRP | AP009048.1 |
| ARO:3003890 | Escherichia coli UhpT with mutation conferring resistance to fosfomycin | 95.03 | 100.00 | Ecol_UhpT_FOF | HG738867.1 |
| ARO:3004597 | Klebsiella pneumoniae KpnH | 94.02 | 100.00 | Kpne_KpnH | ASTU01000063.1 |
| ARO:3003950 | msbA | 92.78 | 100.00 | msbA | U00096.3 |
| ARO:3000263 | marA | 92.74 | 97.64 | marA | AP009048.1 |
| ARO:3000516 | emrR | 92.57 | 100.00 | emrR | U00096.3 |
| ARO:3000828 | baeR | 91.25 | 100.00 | baeR | AP009048.1 |
| ARO:3001328 | Escherichia coli mdfA | 85.61 | 100.00 | Ecol_mdfA | JQ394987.1 |
| ARO:3005069 | rsmA | 85.25 | 100.00 | rsmA | AF061757.1 |
| ARO:3003378 | Escherichia coli AcrAB-TolC with MarR mutations conferring resistance to ciprofloxacin and tetracycline | 84.03 | 100.00 | Ecol_MarR_MULT | U00096.1 |
| ARO:3003578 | PmrF | 83.69 | 101.55 | PmrF | U00096.1 |
RGI v6.0.0 (Database: CARD Variants v4.0.0, Jul. 2022 release)
ResFinder
| Resistance gene | Identity | Coverage | Phenotype | Accession no. |
|---|---|---|---|---|
| mef(A) | 100.00 | 100.00 | Macrolide resistance | U83667 |
| msr(D) | 100.00 | 100.00 | Macrolide, Lincosamide and Streptogramin B resistance | AF274302 |
| OqxA | 99.23 | 100.00 | Disinfectant resistance | EU370913 |
| OqxB | 99.11 | 100.00 | Disinfectant resistance | EU370913 |
| fosA | 99.05 | 100.00 | Fosfomycin resistance | ACWO01000079 |
ResFinder v4.0 (Database: resfinder_db, May 2022 release)
AMRFinderPlus
| Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|
| fosA | FosA5 family fosfomycin resistance glutathione transferase | EXACTX | 100.00 | 100.00 | WP_004146118.1 |
| mef(A) | macrolide efflux MFS transporter Mef(A) | EXACTX | 100.00 | 100.00 | WP_000417519.1 |
| msr(D) | ABC-F type ribosomal protection protein Msr(D) | EXACTX | 100.00 | 100.00 | WP_000420313.1 |
| oqxA | multidrug efflux RND transporter periplasmic adaptor subunit OqxA | EXACTX | 100.00 | 100.00 | WP_002914189.1 |
| oqxB | multidrug efflux RND transporter permease subunit OqxB | BLASTX | 99.90 | 100.00 | WP_004149399.1 |
AMRFinderPlus v3.10.42 (Database: Oct. 2022 release)
Virulence factors
Virulence Factor Database (VFDB)
BLASTN v2.8.1+ (Database: VFDB, Jun. 2022 release)
VirulenceFinder
| Database | Virulence factor | Identity | Coverage | Protein function | Accession no. |
|---|---|---|---|---|---|
| virulence_ecoli | fyuA | 100.0 | 100.00 | Siderophore receptor | CAY233333 |
| virulence_ecoli | mchF | 100.0 | 100.00 | ABC transporter protein MchF | AF063590 |
| virulence_ecoli | irp2 | 99.97 | 100.00 | High molecular weight protein 2 non-ribosomal peptide synthetase | NZ_NMCY01000014 |
| virulence_ecoli | iutA | 99.55 | 100.00 | Ferric aerobactin receptor | CP003034 |
| virulence_ecoli | iroN | 99.54 | 100.00 | Enterobactin siderophore receptor protein | AP006726 |
| virulence_ecoli | traT | 97.54 | 100.00 | Outer membrane protein complement resistance | FLWH01000012 |
| virulence_ecoli | iucC | 90.82 | 100.00 | Aerobactin synthetase | AP018808 |
| virulence_ecoli | terC | 83.26 | 96.48 | Tellurium ion resistance protein | MG591698 |
VirulenceFinder v2.0.3 (Database: virulencefinder_db, Dec. 2022 release)
Pathogenic genes
PHI-base
| Protein ID | Gene name | Identity | Coverage | e-value | Function | Gene ID |
|---|---|---|---|---|---|---|
| W9BBU8 | leuC | 100.00 | 99.79 | 0.0 | 3-Isopropylmalate dehydratase large subunit | AIT01851 |
| W9BHK2 | ybtS | 100.00 | 99.77 | 0.0 | Isochorismate synthase/isochorismate-pyruvate lyase | AIT04278 |
| A0A086IQC3 | proV | 100.00 | 99.75 | 0.0 | Glycine betaine/L-proline transport ATP-binding protein | AIS99989 |
| W9BCN0 | leuB | 100.00 | 99.73 | 0.0 | 3-Isopropylmalate dehydrogenase | AIT01852 |
| O87753 | ompk35 | 100.00 | 99.72 | 0.0 | Porin | ADG27466 |
| A6TF99 | arnC | 100.00 | 99.70 | 0.0 | Putative sugar transferase | ABR79233 |
| A0A0W8AWM7 | yhbU | 100.00 | 99.70 | 0.0 | Ubiquinone biosynthesis protein | ARA47379 |
| A6TF97 | arnD | 100.00 | 99.67 | 0.0 | Hypothetical protein | ABR79231 |
| W1I1Q2 | lpxO | 100.00 | 99.67 | 0.0 | Fe2+/alpha-ketoglutaratedependent dioxygenase | CDL64297 |
| W9BEV6 | ycgE | 100.00 | 99.59 | 0.0 | HTH-type transcriptional regulator | ARA45326 |
| A6TAW6 | gntR | 100.00 | 99.58 | 0.0 | Fatty acid metabolism regulator | ABR77737 |
| W9BHK4 | irp2 | 99.85 | 99.95 | 0.0 | Yersiniabactin | CDO15339 |
| A6TF98 | arnA | 99.85 | 99.85 | 0.0 | Hypothetical protein | ABR79232 |
| P46359 | psn | 99.85 | 99.85 | 0.0 | Iron binding | CAA84487 |
| U5U790 | oqxA | 99.74 | 99.74 | 0.0 | RND family efflux transporter | AIS72928 |
| Q6U607 | iucA | 99.73 | 99.86 | 0.0 | Aerobactin | AAR07714 |
| W9B4Q6 | oqxB | 99.71 | 99.90 | 0.0 | Multidrug efflux pump | CDO12913 |
| A0A2X3EJX6 | fimD | 99.71 | 88.09 | 0.0 | Type 1 fimbriae anchoring protein | SQC44282 |
| A0A086VCI7 | ybtP | 99.65 | 99.82 | 0.0 | ATP Binding Cassette Protein | AJE56481 |
| W9BNM8 | entB | 99.65 | 99.65 | 0.0 | Enterobactin and salmochelin | ANN51031 |
| W9B3Z6 | yfiN | 99.51 | 99.75 | 0.0 | c-di-GMP turnover enzyme | CDO12934 |
| A6TFA0 | arnB | 99.47 | 99.74 | 0.0 | Putative aminotransferase | ABR79234 |
| A6TF96 | arnT | 99.46 | 99.82 | 0.0 | 4-Amino-4-deoxy-L-arabinose transferase | ABR79230 |
| A0A076ZK37 | VK055_1980 | 99.44 | 81.82 | 0.0 | HADa ATPase, P type | AIK80586 |
| Q1RPI4 | ybtE | 99.43 | 99.81 | 0.0 | Yersiniabactin | AIX63806 |
| A0A076ZMY5 | VK055_1952 | 99.38 | 99.80 | 0.0 | Betaine aldehyde dehydrogenase | AIK80558 |
| B0LF88 | fimH | 99.34 | 99.67 | 0.0 | Type 1 fimbriae adhesin | ABW24959 |
| A0A0E0V727 | ybtQ | 99.33 | 99.83 | 0.0 | ATP Binding Cassette Protein | AEQ13038 |
| A0A164J6A6 | rarA | 99.33 | 99.78 | 0.0 | Holliday junction DNA helicase | SAS94147 |
| B5Y383 | pgaC | 99.32 | 99.77 | 0.0 | Production of poly-b-linkedN-acetylglucosamine | ACI10823 |
| B5Y1W2 | leuA | 99.23 | 99.62 | 0.0 | 2-Isopropylmalate synthase | ACI08908 |
| Q6U5X7 | iroB | 99.19 | 99.73 | 0.0 | Salmochelin | AAR07744 |
| A0A076ZHT9 | VK055_1961 | 99.19 | 99.60 | 0.0 | Serine 3-dehydrogenase | AIK80567 |
| B5XSN9 | phoQ | 98.97 | 99.59 | 0.0 | govern the expression of cps and of the loci implicated in lipid A remodeling | ACI11151 |
| A0A0F6AXS9 | lon | 98.85 | 99.87 | 0.0 | ATP-dependent protease | ACY87051 |
| Q7CPB9 | oxyR | 98.69 | 99.67 | 0.0 | Regulatory protein sensor for oxidative stress | AAL22963 |
| P60651 | speB | 98.69 | 99.67 | 0.0 | Agmatinase | AAC75974 |
| P0AC41 | sdhA | 98.64 | 99.83 | 0.0 | Succinate dehydrogenase avoprotein subunit | AAA23895 |
| P13445 | RpoS | 98.48 | 99.70 | 0.0 | RNA polymerase sigma factor | BAA02747 |
| B0LF89 | fimK | 98.44 | 99.78 | 0.0 | Pilus regulatory gene | ABW24960 |
| Q8CL21 | ybtX | 98.12 | 91.03 | 0.0 | Inner membrane protein, membrane permease | AAS61888 |
| A0A0F6B5R3 | STM14_RS15285 | 98.07 | 99.82 | 0.0 | Formate hydrogenlyase subunit 4 | ACY89857 |
| P0A9E5 | FNR | 97.60 | 99.60 | 0.0 | global regulator | AAA87981 |
| A0A0D6I2I2 | spoT | 97.17 | 100.00 | 0.0 | (P)ppGpp synthetase | AKH09371 |
| P00722 | lacZ | 96.68 | 99.90 | 0.0 | Beta-galactosidase | AAA24053 |
| Q8ZLT3 | pnp | 96.41 | 97.75 | 0.0 | polynucleotide phosphorylase, an exoribonuclease involved in RNA processing and degradation | AAL22154 |
| P0A2P8 | fruR | 95.80 | 99.40 | 0.0 | Regulators of systemic infection | CRA_SALTY |
| P0A1P6 | glnA | 95.74 | 99.79 | 0.0 | Glutamine synthetase | AAL22846 |
| Q1JLQ2 | MntE | 95.53 | 99.44 | 0.0 | Manganese Homeostasis | ABF32167 |
| P0A7F6 | speD | 95.45 | 99.62 | 0.0 | S-adenosylmethionine decarboxylase proenzyme | AAC73231 |
| D6QLX8 | OmpK36 | 95.38 | 99.46 | 0.0 | outer membrane proteins | ADG56549 |
| B5QZL1 | prt | 95.32 | 99.67 | 0.0 | OAg biosynthesis | CAR33649 |
| P65882 | purA | 95.14 | 99.77 | 0.0 | Pathogenicity island | AAL23186 |
| P08982 | envZ | 94.98 | 97.12 | 0.0 | Regulators of systemic infection | ENVZ_SALTY |
| P75825 | hcp | 94.91 | 99.82 | 0.0 | Hydroxylamine reductase | AAC73960 |
| P13036 | fecA | 94.64 | 86.58 | 0.0 | Ferric citrate outer membrane transporter | BAE78282 |
| A0A0F6B0W4 | sufB | 94.55 | 99.80 | 0.0 | Sulfur mobilization | ACY88142 |
| D2TU77 | cpxA | 94.53 | 99.78 | 0.0 | Two-component sensor kinase | CBG90543 |
| Q8ZME2 | relA | 93.97 | 99.87 | 0.0 | (P)ppGpp synthetase I | AAL21836 |
| D4HYB2 | guaB | 93.24 | 99.80 | 0.0 | Inosine-5'-monophosphate dehydrogenase | CBA21987 |
| Q97S31 | metE | 93.06 | 99.87 | 0.0 | Methionine biosynthesis enzymes | AAK74738 |
| A0A0F6B941 | atpB | 92.99 | 99.63 | 0.0 | F0F1 ATP synthase subunit A | ACY91043 |
| P67331 | spr0084 | 92.88 | 98.18 | 0.0 | pathogenitcity related | AAK98888 |
| C3T032 | ppk1 | 92.73 | 99.71 | 0.0 | Polyphosphate kinase 1 | ACI80066 |
| Q1J943 | prsA2 | 92.19 | 98.46 | 0.0 | Ribose-phosphate pyrophosphokinase | ABF36968 |
| P63883 | amiC | 92.09 | 99.76 | 0.0 | N-acetylmuramoyl-L-alanine amidase | AAC75856 |
| P27550 | acs | 92.03 | 99.85 | 0.0 | Acetyl-coenzyme A synthetase | AAC43163 |
| P0A6Z3 | htpG | 91.67 | 99.84 | 0.0 | heat shock protein 90 chaperone | AAA23460 |
| P0A6T3 | galK | 91.62 | 99.74 | 0.0 | Galactokinase | CAA26172 |
| B5XY48 | OmpA2 | 91.29 | 100.85 | 0.0 | outer membrane proteins | ACI08342 |
| P12681 | pgtP | 91.14 | 99.78 | 0.0 | Phosphoglycerate transporter protein | AAL21299 |
| D2TPE2 | tolB | 90.93 | 99.77 | 0.0 | Colicin import protein | CBG87511 |
| P32705 | actP | 90.91 | 99.82 | 0.0 | Acetate/glycolate:cation symporter | AAC77037 |
| P05416 | glgA | 90.34 | 99.58 | 0.0 | Glycogen synthase | AAL22395 |
| P0A9G2 | nhaR | 90.17 | 97.68 | 0.0 | Transcriptional activator protein | CAA27969 |
| P36548 | amiA | 90.00 | 99.66 | 0.0 | N-acetylmuramoyl-L-alanine amidase | AAC75488 |
| Q99Z66 | ptsI | 89.95 | 99.83 | 0.0 | Phosphoenolpyruvate-protein phosphotransferase | AAK34199 |
| D4HXG4 | purF | 89.90 | 99.80 | 0.0 | Amidophosphoribosyltransferase | CBA21663 |
| P23865 | Prc | 89.88 | 99.85 | 0.0 | Tail-specific protease | BAA00577 |
| E1AP33 | corA | 89.87 | 99.68 | 0.0 | Magnesium/nickel/cobalt transporter | HM852064 |
| Q8DPC2 | potA | 89.84 | 99.48 | 0.0 | ABC transporter ATP-binding protein - spermidine/putrescine transport | AAL00050 |
| A7ZRQ3 | sufI | 89.79 | 99.79 | 0.0 | Cell division protein | ABV16661 |
| A0A380PIP1 | bipA | 89.77 | 99.67 | 0.0 | Putative GTPase | CAL18716 |
| Q8DYL6 | uvrB | 89.59 | 99.85 | 0.0 | Excinuclease ABC, B subunit | AE014259_2 |
| D2TI55 | map | 89.39 | 99.62 | 0.0 | Effector protein | CBG86951 |
| D4HUC7 | pfkA | 89.06 | 99.69 | 0.0 | ATP-dependent 6-phosphofructokinase | CBA19050 |
| P19642 | pafP | 88.87 | 99.81 | 0.0 | Transcription Regulator | AAA24098 |
| A0A0F6B5R4 | STM14_RS15290 | 88.60 | 99.68 | 0.0 | Formate hydrogenlyase subunit 3 | ACY89858 |
| P19786 | aroA | 88.53 | 99.77 | 0.0 | 3-Phosphoshikimate 1-carboxyvinyltransferase | CAD05378 |
| P09158 | speE | 88.42 | 98.62 | 0.0 | Polyamine aminopropyltransferase | AAC73232 |
| P30745 | moaA | 88.15 | 99.70 | 0.0 | GTP 3',8-cyclase | AAC73868 |
| D4HYW4 | asnB | 87.91 | 99.64 | 0.0 | Asparagine synthase B | CBA20089 |
| D5AF41 | IMPDH | 87.63 | 99.80 | 0.0 | Inosine-5'-monophosphate dehydrogenase | ADE32434 |
| P0C0B9 | bglB | 87.54 | 99.33 | 0.0 | Putative phospho--glucosidase | AAK33487 |
| C5BEV2 | glyA | 87.53 | 99.76 | 0.0 | Serine h ydroxymethyltra nsferase | ACR70340 |
| Q97S30 | metF | 87.41 | 98.96 | 0.0 | Methionine biosynthesis enzymes | AAK74739 |
| B5F8I0 | ArgD | 87.38 | 99.51 | 0.0 | Acetylornithine/succinyldiaminopimelate aminotransferase | ACH49836 |
| A0A0D6I3U0 | envC | 87.29 | 95.56 | 0.0 | Determinants for intrinsic CAMP resistance | ALE64165 |
| Q8ZPL7 | fumC | 87.26 | 98.93 | 0.0 | Fumarate hydratase class II | AAL20389 |
| P08331 | cpdB | 87.17 | 99.85 | 0.0 | 2_,3_-Cyclic phosphodiesterase | AAA97109 |
| D4HUF7 | metB | 86.94 | 98.97 | 0.0 | Cystathionine gamma-synthase | CBA19080 |
| C6DC70 | clpB | 86.93 | 99.88 | 0.0 | Chaperone protein | ACT14164 |
| P0AB24 | efeO | 86.93 | 99.73 | 0.0 | Iron uptake system component | AAC74103 |
| Q66A26 | pykF | 86.60 | 99.79 | 0.0 | Part of the pyruvate - tricarboxylic acid cycle node | CAH21544 |
| Q9ZFU7 | EutR | 86.53 | 99.43 | 0.0 | HTH-type transcriptional regulator | AAC78127 |
| Q8ZRE1 | phoR | 86.51 | 99.54 | 0.0 | Histidine kinase | AAL19352 |
| Q8ZMX2 | pat | 86.48 | 99.21 | 0.0 | acetyltransferase | AAL21545 |
| A4VWH9 | Eno | 86.44 | 99.54 | 0.0 | Enolase | ABP90468 |
| D4ICB6 | nlpI | 86.05 | 99.66 | 0.0 | Tetratricopeptide lipoprotein | EAM_3066 |
| P25535 | ubiI | 86.00 | 99.75 | 0.0 | Aerobic ubiquinone-8 synthase | BAA14327 |
| C5BDL7 | frdA | 85.98 | 98.67 | 0.0 | Fumarate reductase | ACR67633 |
| P33221 | purT | 85.83 | 95.17 | 0.0 | Formate-dependent phosphoribosylglycinamide formyltransferase | AAA23861 |
| A4VYE0 | gidA | 85.26 | 98.75 | 0.0 | tRNA uridine 5-carboxymethylaminomethyl modification enzyme | ABP91129 |
| P0A452 | recA | 85.19 | 98.46 | 0.0 | DNA recombination and repair | AAL00560 |
| A0A0F6B5S3 | STM14_RS15325 | 84.99 | 99.73 | 0.0 | Hydrogenase expression/formation protein | ACY89867 |
| B5TQV9 | PGM | 84.94 | 99.48 | 0.0 | phosphoglucomutase | ACH87041 |
| D4I2T0 | pgi | 84.85 | 99.82 | 0.0 | Glucose-6-phosphate isomerase | CBA23505 |
| D4I0H1 | carA | 84.82 | 97.45 | 0.0 | Carbamoyl-phosphate synthase small chain | CBA22700 |
| D0ZX10 | sssB | 84.81 | 100.00 | 0.0 | Secreted effector protein | ACY88258 |
| D4HYF4 | purL | 84.79 | 99.92 | 0.0 | Phosphoribosylformylglycinamidine synthase | CBA22070 |
| P40120 | mdoD | 84.73 | 99.64 | 0.0 | Glucans biosynthesis protein D | AAC74506 |
| Q54001 | MdsABC | 84.72 | 99.19 | 0.0 | Multidrug transporter of Salmonella | TOLC_SALEN |
| P21169 | speC | 84.67 | 99.86 | 0.0 | Constitutive ornithine decarboxylase | AAC76002 |
| D4HUI1 | ilvA | 84.63 | 99.81 | 0.0 | Threonine dehydratase | CBA19104 |
| Q8ZNK8 | yeiE | 84.32 | 99.65 | 0.0 | Putative LysR family transcriptional regulator | AAL21105 |
| Q8ZJN0 | pgm | 84.27 | 99.61 | 0.0 | 2,3-Bisphosphoglycerate-independent phosphoglycerate mutase | CAL18753 |
| P13738 | nhaA | 84.24 | 99.49 | 0.0 | Antiporter gene | AAA23448 |
| A0A2A7U510 | cadB | 84.20 | 99.77 | 0.0 | Lysine-dependent acid resistance (LDAR) system membrane protein | PEH73496 |
| D4HUY5 | rpoN | 84.07 | 99.79 | 0.0 | Sigma factor, regulating essential virulence gene expression | CBA19258 |
| A0A0F6B1M0 | ydcR | 84.04 | 98.74 | 0.0 | Putative transcriptional regulator | ACY88406 |
| D4I2T4 | metA | 83.82 | 99.68 | 0.0 | Homoserine O-succinyltransferase | CBA23513 |
| Q7CQF1 | hnr | 83.68 | 99.70 | 0.0 | Regulators of systemic infection | Q7CQF1_SALTY |
| D4I4L2 | glmS | 83.58 | 99.84 | 0.0 | Glucosamine-fructose-6-phosphateaminotransferase | CBA24212 |
| C6DI95 | PccS1_001441 | 83.55 | 99.36 | 0.0 | Transcriptional regulator, LysR family, MetR | ACT15089 |
| P76142 | lsrB | 83.28 | 96.48 | 0.0 | Autoinducer-2 ABC transporter periplasmic binding protein | AAC74589 |
| Q8G8P0 | IroD | 83.09 | 99.51 | 0.0 | Catecholate siderophore esterases | AAN76096AF449499_2 |
| A0A0F6B5S4 | STM14_RS15330 | 83.04 | 99.70 | 0.0 | Formate hydrogenlyase transcriptional activator | ACY89868 |
| P31545 | efeB | 82.90 | 100.47 | 0.0 | Deferrochelatase/peroxidase | AAC74104 |
| A4VY17 | pdh | 82.79 | 99.41 | 0.0 | Pyruvate dehydrogenase | ABP91006 |
| D0ZKI3 | bcsA | 82.78 | 99.54 | 0.0 | cellulose synthesis regulation | ACY90746 |
| P17750 | katG | 82.76 | 99.72 | 0.0 | Catalase | AAL22946 |
| A4VWD1 | mnmE | 82.67 | 99.34 | 0.0 | Central tRNA-modifying GTPase | ABP90420 |
| D4HWM2 | cysI3 | 82.39 | 99.30 | 0.0 | Sulfite reductase | CBA19698 |
| C5BF98 | mdh | 82.37 | 99.68 | 0.0 | Malate dehydrogenase | ACR67684 |
| P31554 | LptD | 82.32 | 99.75 | 0.0 | LPS-assembly protein | BAA34130 |
| Q8Z4H3 | iroC | 82.30 | 98.93 | 0.0 | Putative ABC transporter protein | AAO70240 |
| Q8Z445 | barA | 81.99 | 99.46 | 0.0 | AAO70423 | |
| Q6KD45 | iucD | 81.41 | 99.77 | 0.0 | aerobactin | ACJ63516 |
| A0A0F6B5P9 | STM14_RS15230 | 81.31 | 99.69 | 0.0 | NorR family transcriptional regulator | ACY89843 |
| Q8Z4H1 | iroN | 80.94 | 99.59 | 0.0 | TonB-dependent outer membrane siderophore receptor protein | AAO70243 |
| P58662 | rcsC11 | 80.78 | 99.68 | 0.0 | Sensor protein | AAL21172 |
| H9L460 | katE | 80.58 | 100.00 | 0.0 | Catalase | AAL20243 |
| Q8ZQE4 | MacB | 80.56 | 99.69 | 0.0 | ABC-Type Efux Pump | AAL19878 |
| P26469 | rfaC | 80.19 | 96.54 | 0.0 | heptosyl transferase | AAL22571 |
| Q8XDQ1 | katN | 80.00 | 99.33 | 5.59e-180 | Effector protein | BAB35075 |
| A0A0F6B5R1 | STM14_RS15275 | 92.16 | 99.61 | 6.72e-179 | Formate hydrogenlyase complex iron-sulfur subunit | ACY89855 |
| A0A0F6B5S8 | STM14_RS15345 | 83.45 | 90.85 | 1.53e-178 | Manganese/iron ABC transporter ATP-binding protein | ACY89872 |
| P0AA16 | ompR | 100.00 | 99.58 | 1.54e-177 | Transcriptional regulator | AAC76430 |
| P07014 | sdhB | 97.48 | 99.58 | 1.98e-177 | Succinate dehydrogenase iron-sulfur subunit | AAA23896 |
| A0A0F6B5S1 | STM14_RS15315 | 88.62 | 99.66 | 8.71e-177 | Hydrogenase assembly chaperone | ACY89865 |
| A0A0F6B5P8 | STM14_RS15225 | 90.66 | 99.61 | 8.58e-176 | Arabinose 5-phosphate isomerase | ACY89842 |
| P0A9Q1 | arcA | 97.06 | 99.58 | 9.33e-175 | Aerobic respiration control protein | AAA97297 |
| D2TR63 | artP | 93.80 | 99.59 | 4.49e-173 | Arginine ABC transporter, ATP-binding protein | CBG87650 |
| U6ZHA8 | kdgR | 88.59 | 99.62 | 5.92e-173 | virulence negative regulators | ERO57666 |
| P39832 | znuB | 92.34 | 99.62 | 2.66e-171 | Zn(2(+)) ABC transporter membrane subunit | AAC74929 |
| P45610 | tonB | 99.18 | 99.59 | 2.48e-170 | siderophores synthesis | CAA48498 |
| A0A0M2J080 | sufC | 90.73 | 99.60 | 2.31e-169 | Sulfur mobilization | APF09033 |
| A0A0F6B5T0 | STM14_RS15355 | 87.45 | 94.43 | 2.51e-169 | Iron ABC transporter permease | ACY89874 |
| C6DEY6 | rsmA | 81.62 | 99.27 | 2.28e-168 | Ribosomal RNA small subunit methyltransferase A | ACT14650 |
| P0A9X1 | znuC | 90.40 | 99.21 | 3.07e-167 | Zn(2(+)) ABC transporter ATP binding subunit | AAC74928 |
| A0A086ITU0 | fimC | 100.00 | 99.55 | 2.44e-166 | Molecular chaperone | AUU95693 |
| A0A0F6B5S9 | STM14_RS15350 | 81.48 | 98.54 | 7.58e-166 | Iron ABC transporter permease | ACY89873 |
| A0A518VKX7 | kduD | 84.19 | 99.61 | 9.96e-165 | 2-Dehydro-3-deoxy-D-gluconate 5-dehydrogenase | QHP58461 |
| P0A2F2 | cob | 84.93 | 98.91 | 1.96e-163 | nicotinamide adenine dinucleotide (NAD + )-dependent deacetylase | AAC78722 |
| W9B383 | dedA | 100.00 | 99.55 | 1.72e-159 | DedA family inner membrane protein | ARA47408 |
| P0A2T6 | crp | 100.00 | 99.53 | 2.78e-159 | Regulators of systemic infection | CRP_SALTY |
| Q7CPD5 | tatC | 84.94 | 99.62 | 5.03e-159 | Sec-independent protein translocase | AAL22819 |
| Q8Z8K9 | entA | 85.66 | 99.60 | 3.48e-157 | 2,3-Dihydro-2,3-dihydroxybenzoate dehydrogenase | AAO69872 |
| Q8GM84 | rcsB | 99.54 | 99.54 | 4.23e-157 | govern the expression of cps and of the loci implicated in lipid A remodeling | AAL25250 |
| P0A1D7 | ClpP | 99.03 | 99.52 | 9.23e-156 | proteolytic component | BAA94668 |
| C9Y236 | FkpA | 88.12 | 94.20 | 4.33e-155 | virulence factor | CBA34185 |
| Q8GM81 | rmpA | 98.09 | 99.53 | 1.42e-154 | Regulator of mucoid phenotype | AAL25252 |
| F5ZP95 | phoP | 93.27 | 99.11 | 5.57e-154 | Virulence transcriptional regulatory protein | AEF07105 |
| D2TU76 | cpxR | 95.69 | 99.57 | 1.67e-153 | Two-component response regulator | CBG90542 |
| P96058 | sirA | 93.12 | 99.54 | 1.79e-153 | AAO68606 | |
| W9BQ45 | leuD | 100.00 | 99.50 | 1.11e-152 | 3-Isopropylmalate dehydratase small subunit | AIT01850 |
| P0AF26 | narJ | 86.38 | 99.16 | 8.00e-152 | Nitrate reductase molybdenum cofactor assembly chaperone | AAC74310 |
| P08870 | pyrE | 93.90 | 99.53 | 1.58e-149 | Orotate phosphoribosyltransferase | AAL22592 |
| Q93MY4 | covR | 84.68 | 99.58 | 3.41e-149 | Responder protein | AAK71319 |
| P43019 | sodA | 95.15 | 99.52 | 9.66e-149 | Cytoplasmic superoxide dismutase | AAC43331 |
| P11350 | narI | 90.62 | 99.12 | 3.14e-147 | Respiratory nitrate reductase 1 gamma chain | AAC74311 |
| Q66EI1 | pdhR | 86.33 | 91.76 | 4.66e-147 | Part of the pyruvate - tricarboxylic acid cycle node | CAH19952 |
| G3FT04 | MrkA | 99.50 | 99.51 | 5.67e-146 | Ferrous iron transporter | AEO27492 |
| A0A0H3NDI1 | tsaA | 95.00 | 99.50 | 9.40e-146 | Peroxiredoxin | CBW16497 |
| A0A0F6B1X1 | pspA | 92.34 | 99.55 | 6.36e-144 | Phage-shock protein | ACY88508 |
| A0A0S3FFR9 | fimA | 100.00 | 99.48 | 2.18e-141 | Fimbrial protein | AUU95694 |
| P0A251 | ahpC | 99.47 | 99.47 | 3.21e-141 | Peroxiredoxin | AAL19559 |
| Q5KQZ9 | magA | 99.48 | 99.48 | 6.54e-141 | Contributes to K1 capsular polysaccharide (CPS) biosynthesis | BAD86762 |
| P0AF32 | narV | 82.74 | 99.56 | 6.78e-139 | Respiratory nitrate reductase 2 gamma chain | BAA15102 |
| P64036 | EF-P | 97.34 | 99.47 | 8.94e-139 | Elongation factor | AAL23157 |
| Q8ZMF9 | pimt | 88.94 | 99.52 | 2.38e-138 | Protein isoaspartate methyl transferase | AAL21806 |
| P66796 | QseB | 85.84 | 99.55 | 3.07e-137 | Two-component system response regulator | CAD03009 |
| B3VA60 | CovR | 81.66 | 99.56 | 4.42e-137 | serves to repress GAS virulence factor-encoding genes | ACE75886 |
| P0A2F0 | rpoE | 96.86 | 99.48 | 4.79e-137 | Regulators of systemic infection | RPOE_SALT |
| A1ABF3 | RstA | 80.75 | 94.44 | 2.04e-134 | Part of a two component regulatory system | ABJ00993 |
| B0LF83 | fimI | 100.00 | 99.44 | 1.96e-132 | Pilin (type 1 fimbria component protein) | ABW24954 |
| P0A2F4 | sodB | 91.19 | 99.48 | 2.10e-132 | Cytoplasmic superoxide dismutase | AAL20353 |
| P08179 | purN | 83.41 | 99.06 | 6.05e-132 | Phosphoribosylglycinamide formyltransferase | AAA83899 |
| A0A0D6I7L0 | ppiA | 92.63 | 98.95 | 1.40e-130 | Peptidyl-prolyl cis-trans isomerase | ALD83590 |
| A6T684 | pagP | 99.42 | 90.53 | 2.98e-128 | Acyltransferase | ABR76105 |
| P60317 | ProQ | 85.15 | 99.13 | 1.08e-127 | RNA chaperone | AAL20761 |
| W9BND0 | yfiR | 100.00 | 94.94 | 2.48e-126 | Negative regulator of YfiBNR system | CDO12935 |
| Q6D4B5 | eda | 85.92 | 99.07 | 1.51e-124 | 2-Keto-3-deoxy-6-phosphogluconate aldolase | CAG75378 |
| A0A0F6B5R2 | STM14_RS15280 | 90.00 | 99.45 | 1.68e-123 | Formate hydrogenlyase subunit 5 | ACY89856 |
| A1AEN2 | LuxS | 93.57 | 99.42 | 8.33e-123 | controller in the Quorum sensing | ABJ02122 |
| P0AFV4 | MepS | 86.24 | 99.47 | 4.35e-122 | Peptidoglycan DD-endopeptidase/peptidoglycan LD-carboxypeptidase | AAC75236 |
| P0ACR9 | MprA | 92.57 | 98.87 | 6.82e-122 | Transcriptional repressor of an operon encoding the EmrAB efflux pump. | CAA38090 |
| A0A0F7DI09 | ppiB | 94.51 | 99.39 | 1.67e-117 | Peptidyl-prolyl cis-trans isomerase | ALD83591 |
| D3VBH2 | lrp | 96.95 | 99.39 | 4.11e-117 | Global Transcription Factor | CBJ89611 |
| A0A0F6B5Q6 | STM14_RS15255 | 90.75 | 95.05 | 1.44e-115 | Hypothetical protein | ACY89850 |
| A0A0H3NC59 | yeaB | 82.29 | 99.48 | 1.15e-114 | RNA methyltransferase | CBW17849 |
| P0AC98 | satP | 87.23 | 99.47 | 1.10e-113 | Succinate-acetate/proton symporter | AAC73121 |
| P0A2G1 | smpB | 94.38 | 99.38 | 3.27e-113 | Regulators of systemic infection | SSRP_SALTY |
| P0AB06 | ycbK | 91.26 | 99.45 | 5.20e-113 | Peptidoglycan LD-endopeptidase | AAC74012 |
| A0A0T5I632 | fimF | 90.71 | 99.45 | 8.63e-113 | Putative fimbrial subunit | SBY39291 |
| P23484 | fecI | 89.02 | 99.43 | 3.92e-112 | RNA polymerase sigma factor | AAA23766 |
| P64281 | greA | 94.30 | 99.37 | 3.29e-111 | Transcription elongation factor | AAL22169 |
| P0A1G5 | DksA | 98.67 | 99.34 | 7.64e-111 | Response Regulator | AAD01437 |
| D2TNF0 | argR | 94.23 | 99.36 | 2.26e-107 | Arginine repressor | CBG91281 |
| Q8ZLJ2 | greB | 91.08 | 99.37 | 1.08e-106 | Transcription elongation factor | AAL22365 |
| Q7CQY3 | fur | 96.00 | 99.34 | 1.34e-106 | Ferric uptake regulation protein | AAL19637 |
| D4I230 | hcp-2 | 82.21 | 99.39 | 1.29e-102 | T6SS Effector protein | CBA23273 |
| Q7CQ10 | iscR | 93.29 | 98.79 | 2.49e-98 | Fe-S cluster sensor | AAL21438 |
| P0A917 | OmpX | 81.98 | 98.26 | 2.27e-97 | Outer membrane protein | AAA66329 |
| A6TAK8 | hns | 100.00 | 99.26 | 8.45e-97 | pleiotropic regulator | ABR77629 |
| Q665I9 | ptsN | 85.06 | 95.65 | 4.46e-96 | Part of the pyruvate - tricarboxylic acid cycle node | CAH22766 |
| A0A0F6B5Q9 | STM14_RS15265 | 88.39 | 98.73 | 3.78e-92 | Formate hydrogenlyase maturation protein | ACY89853 |
| A0A0L9JQ40 | iscU | 97.66 | 99.22 | 3.24e-91 | Fe-S cluster sensor | APQ81541 |
| A1JQ74 | ybeY | 81.82 | 97.47 | 1.32e-89 | Endoribonuclease | CAL13026 |
| A0A0F6B5R0 | STM14_RS15270 | 87.50 | 99.27 | 1.89e-88 | NADH-quinone oxidoreductase subunit | ACY89854 |
| U2W9V3 | SpxA2 | 91.67 | 99.25 | 5.91e-88 | Transcriptional regulator | ERL21461 |
| A6TF94 | arnF | 100.00 | 99.21 | 6.80e-86 | Hypothetical protein | ABR79228 |
| A0A0F7J4C9 | tomB | 91.13 | 99.20 | 9.29e-86 | Hha toxicity attenuator | AKH06147 |
| P40676 | slyA | 84.03 | 99.31 | 1.34e-85 | Regulators of systemic infection | SLYA_SALTY |
| P69054 | sdhC | 93.02 | 99.23 | 6.70e-85 | Succinate dehydrogenase | AAA23893 |
| Q57PB8 | MarA | 92.74 | 96.88 | 1.93e-84 | Transcriptional regulator | AAX65443 |
| Q8XBU9 | ybdB | 82.48 | 99.28 | 2.21e-84 | Proofreading thioesterase | AE005239_7 |
| A0A1C1TY69 | mdtJ | 99.17 | 99.17 | 5.23e-78 | Multidrug transporter subunit | AUY17561 |
| Q57RZ3 | ramA | 90.27 | 99.12 | 3.70e-76 | Transcriptional regulator | AAX64518 |
| A6TF95 | arnE | 100.00 | 99.12 | 9.86e-76 | Hypothetical protein | ABR79229 |
| Q6CZA0 | metJ | 96.19 | 99.06 | 4.44e-75 | Repressor of the methionine biosynthesis regulon | CAG77150 |
| P0AC44 | sdhD | 90.44 | 99.14 | 7.76e-71 | Succinate dehydrogenase | AAA23894 |
| B5XR94 | mdtI | 97.25 | 99.09 | 9.14e-71 | Multidrug resistance protein | ACI10803 |
| C6DIJ6 | PccS1_001523 | 97.96 | 98.99 | 1.47e-67 | Transcriptional regulator, Fis family, Fis | ACT11296 |
| P64394 | himD | 98.92 | 97.89 | 2.77e-66 | Regulators of systemic infection | IHFB_SALTY |
| P0A1R0 | hfq | 91.26 | 98.06 | 1.16e-64 | Regulators of systemic infection | HFQ_SALTY |
| D4HX89 | yfiA | 80.18 | 98.23 | 1.89e-64 | CBA19780 | |
| A0A0F7DJX4 | ppiC | 92.47 | 98.94 | 3.17e-60 | Peptidyl-prolyl cis-trans isomerase | ALD83589 |
| D0Z9U0 | hupA | 95.56 | 98.90 | 6.32e-58 | Nucleoid-associated protein, is a basic DNA-binding protein involved in gene regulation | ACY83030 |
| Q8DQV4 | spr0479 | 85.42 | 97.96 | 2.23e-57 | essential gene | AAK99283 |
| E0SMW8 | clpS | 82.98 | 87.85 | 1.46e-56 | ATP-dependent Clp protease adapter protein | ADM98238 |
| D4HXP5 | ptsH | 96.47 | 98.84 | 7.61e-56 | Phosphocarrier protein HPr | CBA21825 |
| A0A0F6B5S2 | STM14_RS15320 | 90.00 | 98.90 | 1.31e-55 | Hydrogenase formation protein | ACY89866 |
| D4HUY4 | yhbH | 80.00 | 98.96 | 2.06e-54 | a novel ribosome-associated modulation protein | CBA19257 |
| Q8DP67 | spr1327 | 92.94 | 98.84 | 5.76e-54 | essential gene | AAL00131 |
| P0AA34 | yedF | 96.10 | 98.72 | 1.60e-52 | Hypothetical transcription factor | AAL20878 |
| Q8CZ89 | spr0175 | 85.23 | 98.88 | 1.36e-51 | pathogenitcity related | AAK98979 |
| Q8DRE1 | spr0177 | 83.15 | 87.25 | 5.21e-50 | essential gene | AAK98981 |
| Q7CR17 | hha | 98.61 | 98.63 | 8.84e-50 | Hemolysin expression-modulating protein | AAL19427 |
| Q8ZQ03 | ycfR | 84.71 | 98.84 | 8.90e-48 | Outer membrane protein | AAL20143 |
| A0A0U1J4N7 | yqiC | 89.87 | 79.00 | 1.83e-46 | Membrane fusogenic activity | CNQ39570 |
| P0A9Y9 | cspC | 100.00 | 98.57 | 4.54e-46 | Cold shock protein | AAC06037 |
| A0A0F6AYC2 | cspE | 97.10 | 98.57 | 1.73e-45 | Cold shock protein | ACY87244 |
| A0A0F6B1X0 | pspB | 81.08 | 98.67 | 1.70e-42 | Phage-shock protein | ACY88507 |
| P69913 | csrA | 100.00 | 98.39 | 8.56e-40 | Post-transcriptional regulator | AAA71919 |
| A0A6C7HPB2 | SEN1538 | 93.33 | 98.36 | 1.16e-33 | Conserved hypothetical protein | CAR33117 |
| Q48412 | RomA (VK055_1984) | 98.11 | 79.70 | 4.66e-72 | Metallo-beta-lactamase superfamily protein | AIK80590 |
| W9B5X1 | ykfE (VK055_1949) | 99.32 | 84.09 | 1.40e-108 | inhibitor of vertebrate C-type lysozyme | AIK80555 |
| D4I4J9 | EaAdeP (EAMY 3685) | 84.26 | 98.63 | 0.0 | Putative AzgA family transporter | CBA24187 |
| W9B570 | FepA (VK055_1934) | 99.37 | 86.00 | 0.0 | TonB-dependent siderophore receptor family protein | AIK80540 |
| W9BF24 | EntA (VK055_1922) | 99.60 | 95.80 | 0.0 | 2,3-Dihydro-2,3-dihydroxybenzoate dehydrogenase | AIK80528 |
| Q9I0J4 | nuoI (PA2644) | 82.95 | 96.17 | 3.65e-108 | NADH-quinone oxidoreductase | AE004693_3 |
| A1JLB7 | RcsB (YE1397) | 91.43 | 97.22 | 6.14e-142 | Transcriptional regulatory protein | CAL11489 |
| A0A0F6B0X0 | STM14_RS07735 (lppB) | 84.81 | 97.50 | 2.12e-41 | Hypothetical protein | ACY88148 |
| A0A0F6B0X1 | STM14_RS07740 (lpp) | 97.44 | 98.73 | 1.54e-49 | Murein lipoprotein | ACY88149 |
| P0AA28 | thioredoxin 1 | 97.25 | 99.09 | 7.65e-76 | Redox activity | BAA00903 |
| A0A0F6B5P4 | STM14_RS15205 (slrB) | 81.67 | 99.17 | 1.35e-67 | PTS glucitol/sorbitol transporter subunit IIA | ACY89838 |
| A0A0F6B0W8 | STM14_RS07725 (ynhA/sufE) | 80.44 | 99.28 | 1.10e-82 | Cysteine desulfuration protein | ACY88146 |
| A0A0F6B5P2 | STM14_RS15195 (srlA) | 93.05 | 99.47 | 2.48e-131 | PTS sorbitol transporter subunit IIC | ACY89836 |
| B5Y006 | BetI (VK055_1951) | 100.00 | 99.49 | 1.10e-144 | Transcriptional repressor | AIK80557 |
| B5XZZ0 | EntD (VK055_1935) | 92.82 | 99.52 | 2.26e-143 | 4'-Phosphopantetheinyl transferase superfamily protein | AIK80541 |
| D2TUX9 | dsbA (ROD_38991) | 87.92 | 99.52 | 4.10e-141 | Thiol:disulfide interchange protein | CBG90603 |
| Q56056 | RNase III | 96.46 | 99.56 | 3.30e-164 | endoribonucleases | AAA92440 |
| A0A0F6B0W5 | STM14_RS07710 (sufC) | 90.73 | 99.60 | 2.31e-169 | Fe-S cluster assembly ATPase | ACY88143 |
| W9B5Y9 | FepC (VK055_1930) | 100.00 | 99.62 | 0.0 | Ferric vibriobactin ABC transporter, ATP-binding protein | AIK80536 |
| A0A0F6B5P5 | STM14_RS15210 (srlD) | 91.89 | 99.62 | 2.80e-177 | Sorbitol-6-phosphate dehydrogenase | ACY89839 |
| Q8X6J9 | ovrB (Z0346) | 84.69 | 99.66 | 0.0 | LysR-type transcriptional regulator | AE005205_3 |
| W9BFU2 | lpxL1 (BN49_2155) | 99.67 | 99.67 | 0.0 | Lipid A late acyltransferase | ATM55433 |
| W9B4X1 | lpxL2 (BN49_1538) | 99.67 | 99.67 | 0.0 | Lipid A late acyltransferase | AIT02281 |
| W9BNM7 | FepD (VK055_1928) | 99.70 | 99.70 | 0.0 | Ferric enterobactin transport system permease | AIK80534 |
| W9B576 | FepG (VK055_1929) | 99.70 | 99.70 | 0.0 | Ferric enterobactin transport system permease | AIK80535 |
| Q04M32 | ilvC (SPD_0406) | 97.35 | 99.71 | 0.0 | Ketol-acid reductoisomerase (NADP(+)) | ABJ55451 |
| A0A086IIR8 | YbdK (VK055_1976) | 100.00 | 99.73 | 0.0 | Gamma-glutamyl cysteine ligase | AIK80582 |
| A0A085DFX7 | EntC (VK055_1925) | 99.74 | 99.74 | 0.0 | Isochorismate synthase | AIK80531 |
| A0A0F6B0W7 | STM14_RS07720 (sufS) | 81.03 | 99.75 | 0.0 | Cysteine desulfurase | ACY88145 |
| A0A0F6B0X2 | STM14_RS07745 (pykF) | 96.17 | 99.79 | 0.0 | Pyruvate kinase I | ACY88150 |
| W9B580 | entE (VK055_1924) | 99.25 | 99.81 | 0.0 | (2,3-dihydroxybenzoyl)adenylate synthase | AIK80530 |
| E0SMW9 | clpA (Dda3937_02363) | 89.87 | 99.87 | 0.0 | ATP-dependent Clp protease ATP-binding subunit | ADM98239 |
| A0A0F6B5P3 | STM14_RS15200 (srlE) | 87.12 | 100.31 | 0.0 | PTS sorbitol transporter subunit IIB | ACY89837 |
| D2TI49 | degP (ROD_01651) | 90.98 | 100.64 | 0.0 | Periplasmic serine endoprotease DegP-like | CBG86945 |
| D4I3E6 | trpB | 92.05 | 66.50 | 0.0 | Tryptophan synthase beta chain | CBA20869 |
| A0A8E5JM30 | acrD | 90.47 | 63.68 | 0.0 | Resistance-nodulation-cell division (RND) transporter | QUZ94265 |
| W8ZK20 | yegN | 87.36 | 60.81 | 0.0 | Multidrug efflux system subunit | CDN82752 |
| B5XZY6 | EntF (VK055_1931) | 98.60 | 60.59 | 0.0 | Amino acid adenylation domain protein | AIK80537 |
BLASTP v2.8.1+ (Database: PHI-base v4.14, Nov. 2022 release)
Plasmid
PlasmidFinder
| Plasmid | Identity | Query / Template | Accession no. |
|---|---|---|---|
| IncFIB(K) | 99.11 | 560 / 560 | JN233704 |
| IncFII(pKP91) | 90.95 | 232 / 230 | CP000966 |
PlasmidFinder 2.0.1 (Database: plasmidfinder_db, Jan. 2023 release)
Prophage
Phigaro
| Scaffold | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| JUNV01000105.1 | 3340 | 38521 | False | Siphoviridae | VOG1539, VOG5277, VOG4662, VOG1509, VOG5084, VOG4000, VOG10933, VOG6971, VOG3477, VOG2473, VOG9325, VOG2471, VOG0697, VOG2469, VOG8535, VOG2468, VOG9541, VOG2467, VOG5296, VOG2466, VOG5027, VOG2464, VOG7068, VOG0796, VOG0632, VOG1520, VOG4565, VOG0765, VOG2096, VOG7615, VOG4693, VOG0618, VOG0293, VOG2339, VOG5837, VOG4755, VOG10912, VOG7516, VOG8996, VOG4571, VOG4788, VOG8249, VOG0355, VOG4566, VOG2338, VOG0248, VOG0827 |
| JUNV01000257.1 | 3907 | 28955 | False | Siphoviridae | VOG1539, VOG5277, VOG5838, VOG4820, VOG4820, VOG4634, VOG0704, VOG9583, VOG4589, VOG0204, VOG4553, VOG4568, VOG4556, VOG4544, VOG4581, VOG9438, VOG6465, VOG2125, VOG2388, VOG2096, VOG0251, VOG4693, VOG4694, VOG4566, VOG2085, VOG2186, VOG10933 |
Phigaro v2.3.0 (Database: Aug. 2017 release)