Probiotic potential risk score
| ARGs (CARD) | VFs (VFDB) | PGs (PHI-base) | PPRS |
|---|---|---|---|
| 0 | 0 | 0 | 0.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| ARO accession | ARO name | Identity | Coverage | CARD name | Accession no. |
|---|---|---|---|---|---|
| No hit found | |||||
RGI v6.0.0 (Database: CARD Variants v4.0.0, Jul. 2022 release)
ResFinder
| Resistance gene | Identity | Coverage | Phenotype | Accession no. |
|---|---|---|---|---|
| No hit found | ||||
ResFinder v4.0 (Database: resfinder_db, May 2022 release)
AMRFinderPlus
| Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|
| No hit found | |||||
AMRFinderPlus v3.10.42 (Database: Oct. 2022 release)
Virulence factors
Virulence Factor Database (VFDB)
| Gene ID | Gene name | Identity | Coverage | e-value | VF name | VF category | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
BLASTN v2.8.1+ (Database: VFDB, Jun. 2022 release)
VirulenceFinder
| Database | Virulence factor | Identity | Coverage | Protein function | Accession no. |
|---|---|---|---|---|---|
| No hit found | |||||
VirulenceFinder v2.0.3 (Database: virulencefinder_db, Dec. 2022 release)
Pathogenic genes
PHI-base
| Protein ID | Gene name | Identity | Coverage | e-value | Function | Gene ID |
|---|---|---|---|---|---|---|
| No hit found | ||||||
BLASTP v2.8.1+ (Database: PHI-base v4.14, Nov. 2022 release)
Plasmid
PlasmidFinder
| Plasmid | Identity | Query / Template | Accession no. |
|---|---|---|---|
| No hit found | |||
PlasmidFinder 2.0.1 (Database: plasmidfinder_db, Jan. 2023 release)
Prophage
Phigaro
| Scaffold | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| NKKW01000101.1 | 512 | 22999 | False | Myoviridae | VOG0573, VOG1348, VOG1433, VOG1956, VOG6307, VOG4699, VOG1352, VOG1883, VOG1881, VOG1353, VOG4778, VOG1942, VOG6932, VOG1915, VOG4865, VOG5027, VOG1912, VOG7407, VOG0796, VOG0686, VOG0198 |
| NKKW01000039.1 | 4140 | 7878 | False | Siphoviridae | VOG9667, VOG4603, VOG4552, VOG2703, VOG0234 |
| NKKW01000039.1 | 13188 | 39792 | False | Siphoviridae | VOG1422, VOG4664, VOG4618, VOG5532, VOG4544, VOG0691, VOG0692, VOG0686, VOG4555, VOG1329, VOG0695, VOG0696, VOG0697, VOG0698, VOG9763, VOG0701, VOG4760, VOG4633, VOG4659, VOG4645, VOG4856 |
| NKKW01000058.1 | 27584 | 50798 | False | Siphoviridae | VOG0327, VOG8222, VOG0198, VOG4841, VOG4581, VOG10115, VOG1886, VOG0202, VOG4556, VOG4573, VOG4553, VOG0204, VOG0205, VOG4727, VOG0207, VOG4586, VOG0209, VOG0660, VOG8263, VOG4633, VOG4659, VOG8355 |
| NKKW01000099.1 | 3012 | 28345 | False | Myoviridae | VOG4845, VOG4691, VOG4550, VOG0573, VOG1348, VOG1433, VOG1956, VOG6163, VOG4699, VOG1352, VOG1883, VOG1881, VOG1353, VOG4778, VOG1942, VOG1915, VOG4918, VOG5027, VOG1912, VOG7407, VOG0796, VOG2545, VOG0376 |
Phigaro v2.3.0 (Database: Aug. 2017 release)