Document

Rank	Genome ID	Species	Strain	BioSample ID	Host	Allelic distance	ARGs	VFs	PGs	PPRS
1	GCA_000219475.3	Lactobacillus johnsonii pf01	pf01	SAMN02469597	pig	0	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
2	GCA_004553005.1	Lactobacillus johnsonii	W2P33.008	SAMN10183307	Sus scrofa	579	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
3	GCA_004556365.1	Lactobacillus johnsonii	W1P12.005	SAMN10183305	Sus scrofa	594	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
4	GCA_004684975.1	Lactobacillus johnsonii	Q1-7	SAMN11294218	Mus musculus	596	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
5	GCA_000204985.1	Lactobacillus johnsonii DPC 6026	DPC 6026	SAMN02603892	-	603	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
6	GCA_004011315.1	Lactobacillus johnsonii	ZLJ010	SAMN10160121	pig	622	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
7	GCA_927798325.1	Lactobacillus johnsonii	ERR2241627_bin.21_metaWRAP_v1.1_MAG	SAMEA12362684	-	625	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
8	GCA_001714745.1	Lactobacillus johnsonii	BS15	SAMN04631277	Homo sapiens	635	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
9	GCA_004555065.1	Lactobacillus johnsonii	W1P33.002	SAMN10183306	Sus scrofa	651	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
10	GCA_014870485.1	Lactobacillus johnsonii	COPD094	SAMN12905041	Homo sapiens	655	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
11	GCA_014841035.1	Lactobacillus johnsonii	GHZ10a	SAMN16131614	swine	657	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
12	GCA_002156645.1	Lactobacillus johnsonii	LJ0	SAMN06364931	Mus musculus	673	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
13	GCA_003316915.1	Lactobacillus johnsonii	Byun-jo-01	SAMN08281023	Mus musculus	678	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
14	GCA_018917265.1	Lactobacillus johnsonii	N16	SAMN19374060	Macaca fascicularis	679	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
15	GCA_007876425.1	Lactobacillus johnsonii	LBJ456	SAMN09244623	Mus musculus	699	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
16	GCA_002311255.1	Lactobacillus johnsonii	UBA1153	SAMN06450955	-	705	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
17	GCA_002311145.1	Lactobacillus johnsonii	UBA1158	SAMN06450962	-	706	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
18	GCA_002311795.1	Lactobacillus johnsonii	UBA1155	SAMN06454931	-	706	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
19	GCA_014058685.1	Lactobacillus johnsonii	NCK2677	SAMN15520417	-	706	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
20	GCA_022213385.1	Lactobacillus johnsonii	MR1	SAMN23978983	Mice	706	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
21	GCA_004569425.1	Lactobacillus johnsonii	CC3	SAMN11126847	Mus musculus C3H/Orl	707	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
22	GCA_010206295.1	Lactobacillus johnsonii	MD006	SAMN12158246	Mus musculus	707	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
23	GCA_015235065.1	Lactobacillus johnsonii	19428wE2_CC3	SAMN16540202	Mus musculus	707	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
24	GCA_002311195.1	Lactobacillus johnsonii	UBA1156	SAMN06457168	-	708	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
25	GCA_021464365.1	Lactobacillus johnsonii	MT4	SAMN23838460	Mus musculus	708	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
26	GCA_002803395.1	Lactobacillus johnsonii	DPPM	SAMN08042343	Mus musculus	711	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
27	GCA_021769495.1	Lactobacillus johnsonii	S34_Bin1	SAMN16706522	Rattus rattus strain Sprague Dawley	711	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
28	GCA_009708135.1	Lactobacillus johnsonii	LL8	SAMN13266521	Peromyscus leucopus	713	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
29	GCA_010586925.1	Lactobacillus johnsonii	G2A	SAMN11618738	-	715	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
30	GCA_015560715.1	Lactobacillus johnsonii	BSD2780061687_150420_B4	SAMN15532485	Homo sapiens	715	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
31	GCA_000008065.1	Lactobacillus johnsonii NCC 533	NCC 533	SAMN02603676	-	717	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
32	GCA_902362355.1	Lactobacillus johnsonii	MGYG-HGUT-00008	SAMEA5849509	-	723	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
33	GCA_910574385.1	Lactobacillus johnsonii	A31_23.LJ.DSS	SAMEA8801287	Mus musculus	723	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
34	GCA_910574395.1	Lactobacillus johnsonii	A16_	SAMEA8801274	Mus musculus	723	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
35	GCA_910576225.1	Lactobacillus johnsonii	C11	SAMEA8801455	Mus musculus	723	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
36	GCA_910574655.1	Lactobacillus johnsonii	A53_45.LJ.DSS	SAMEA8801304	Mus musculus	724	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
37	GCA_001270785.1	Lactobacillus johnsonii 16	16	SAMN03995694	Mus musculus (mouse)	725	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
38	GCA_001572665.1	Lactobacillus johnsonii	W1	SAMN04447977	Morus	728	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
39	GCA_004793575.1	Lactobacillus johnsonii	NM60_B2-8	SAMN10878306	Mus musculus	737	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
40	GCA_002311225.1	Lactobacillus johnsonii	UBA1154	SAMN06450956	-	743	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
41	GCA_002253165.1	Lactobacillus johnsonii	117q	SAMN06848426	mouse	748	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
42	GCA_002253185.1	Lactobacillus johnsonii	117x	SAMN06848427	mouse	748	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
43	GCA_002253205.1	Lactobacillus johnsonii	117k	SAMN06848425	mouse	748	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
44	GCA_002253245.1	Lactobacillus johnsonii	117d	SAMN06848424	mouse	748	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
45	GCA_002253285.1	Lactobacillus johnsonii	117a	SAMN06848422	mouse	748	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
46	GCA_000498675.1	Lactobacillus johnsonii N6.2	N6.2	SAMN02641596	rat	749	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
47	GCA_002253275.1	Lactobacillus johnsonii	117c	SAMN06848423	mouse	749	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
48	GCA_004010015.1	Lactobacillus johnsonii	CH32	SAMN10502285	Homo sapiens	754	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
49	GCA_003503615.1	Lactobacillus johnsonii	UBA11948	SAMN08018977	-	755	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
50	GCA_910585585.1	Lactobacillus johnsonii	MGBC128351	SAMEA8805455	-	756	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
51	GCA_011959745.1	Lactobacillus johnsonii	IMSAGC_010	SAMD00186977	Mus musculus	757	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
52	GCA_013487865.1	Lactobacillus johnsonii	3DG	SAMN13624827	Equus caballus	769	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
53	GCA_003428395.1	Lactobacillus johnsonii	IDCC9203	SAMN09858432	Homo sapiens	788	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
54	GCA_002270005.1	Lactobacillus johnsonii	UMNLJ50	SAMN04573174	Meleagris gallopavo	790	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
55	GCA_009769185.1	Lactobacillus johnsonii	DC22.2	SAMN11371966	Gallus gallus	790	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
56	GCA_002553705.1	Lactobacillus johnsonii	UMNLJ113	SAMN04573237	Meleagris gallopavo	791	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
57	GCA_905204655.1	Lactobacillus johnsonii	SRR341604-bin.12	SAMEA7847928	-	791	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
58	GCA_017889035.1	Lactobacillus johnsonii	MAG.136	SAMN18359771	Gallus gallus	792	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
59	GCA_020026535.1	Lactobacillus johnsonii	AER25	SAMN21024527	chicken	793	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
60	GCA_002176835.1	Lactobacillus johnsonii	UMNLJ22	SAMN04573146	Meleagris gallopavo	794	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
61	GCA_002176855.1	Lactobacillus johnsonii	UMNLJ21	SAMN04573145	Meleagris gallopavo	794	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
62	GCA_002269975.1	Lactobacillus johnsonii	UMNLJ54	SAMN04573178	Meleagris gallopavo	794	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
63	GCA_002270045.1	Lactobacillus johnsonii	UMNLJ95	SAMN04573219	Meleagris gallopavo	794	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
64	GCA_002553695.1	Lactobacillus johnsonii	UMNLJ94	SAMN04573218	Meleagris gallopavo	794	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
65	GCA_020026475.1	Lactobacillus johnsonii	AER105	SAMN21024694	chicken	794	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
66	GCA_002160105.1	Lactobacillus johnsonii	An197	SAMN06473658	Gallus gallus	795	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
67	GCA_008868555.1	Lactobacillus johnsonii	BIO5467	SAMN12856539	-	795	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
68	GCA_000159355.1	Lactobacillus johnsonii ATCC 33200	ATCC 33200	SAMN00001472	Homo sapiens	796	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
69	GCA_001433975.1	Lactobacillus johnsonii ATCC 33200	ATCC 33200	SAMN02369381	Homo sapiens	796	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
70	GCA_012843525.1	Lactobacillus johnsonii	WCA-380-WT-3D	SAMN14558272	Sus scrofa domesticus	796	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
71	GCA_021442345.1	Lactobacillus johnsonii	CNCM I-4884	SAMN21406638	Homo sapiens	796	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
72	GCA_000091405.1	Lactobacillus johnsonii FI9785	FI9785	SAMEA2272487	-	797	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
73	GCA_002269965.1	Lactobacillus johnsonii	UMNLJ114	SAMN04573238	Meleagris gallopavo	797	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
74	GCA_019459625.1	Lactobacillus johnsonii	UBLJ-01	SAMN20447913	Homo sapiens	799	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
75	GCA_904390875.1	Lactobacillus johnsonii	Chicken_6_mag_125	SAMEA7202437	-	800	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
76	GCA_930989925.1	Lactobacillus johnsonii	ERR3414575_bin.48_metaWRAP_v1.1_MAG	SAMEA13008771	-	800	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
77	GCA_003122525.1	Lactobacillus johnsonii	CRL1647	SAMN09081294	Apis mellifera	802	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
78	GCA_020741595.1	Lactobacillus johnsonii	CHK192-2623	SAMN21194300	chicken	808	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score

Antimicrobial resistance genes

Virulence factors

Pathogenic genes

Probiotic potential risk score

Antimicrobial resistance genes

Virulence factors

Pathogenic genes

Probiotic potential risk score

Antimicrobial resistance genes

Virulence factors

Pathogenic genes

Probiotic potential risk score

Antimicrobial resistance genes

Virulence factors

Pathogenic genes

Probiotic potential risk score

Antimicrobial resistance genes

Virulence factors

Pathogenic genes

Probiotic potential risk score

Antimicrobial resistance genes

Virulence factors

Pathogenic genes

Probiotic potential risk score

Antimicrobial resistance genes

Virulence factors

Pathogenic genes

Probiotic potential risk score

Antimicrobial resistance genes

Virulence factors

Pathogenic genes

Probiotic potential risk score

Antimicrobial resistance genes

Virulence factors

Pathogenic genes

Probiotic potential risk score

Antimicrobial resistance genes

Virulence factors

Pathogenic genes

Probiotic potential risk score

Antimicrobial resistance genes

Virulence factors

Pathogenic genes

Probiotic potential risk score

Antimicrobial resistance genes

Virulence factors

Pathogenic genes

Probiotic potential risk score

Antimicrobial resistance genes

Virulence factors

Pathogenic genes

Probiotic potential risk score

Antimicrobial resistance genes

Virulence factors

Pathogenic genes

Probiotic potential risk score

Antimicrobial resistance genes

Virulence factors

Pathogenic genes

Probiotic potential risk score

Antimicrobial resistance genes

Virulence factors

Pathogenic genes

Probiotic potential risk score

Antimicrobial resistance genes

Virulence factors

Pathogenic genes

Probiotic potential risk score

Antimicrobial resistance genes

Virulence factors

Pathogenic genes

Probiotic potential risk score

Antimicrobial resistance genes

Virulence factors

Pathogenic genes

Probiotic potential risk score

Antimicrobial resistance genes

Virulence factors

Pathogenic genes

Probiotic potential risk score