Rank Genome ID Species Strain BioSample ID Host Allelic distance ARGs VFs PGs PPRS
1GCA_001044085.1Lacticaseibacillus rhamnosusLr053SAMN03196655-0
2GCA_001656995.1Lacticaseibacillus rhamnosusLrh21SAMN03196623Homo sapiens147
3GCA_003061705.1Lacticaseibacillus rhamnosusDS14_11SAMN05864077Homo sapiens147
4GCA_004167055.1Lacticaseibacillus rhamnosusco_0103SAMN10239552Homo sapiens147
5GCA_004798455.1Lacticaseibacillus rhamnosusUBLR-58SAMN11370921-147
6GCA_009679265.1Lacticaseibacillus rhamnosusBIOML-A9SAMN11946126Homo sapiens147
7GCA_009679295.1Lacticaseibacillus rhamnosusBIOML-A8SAMN11946125Homo sapiens147
8GCA_009679305.1Lacticaseibacillus rhamnosusBIOML-A7SAMN11946124Homo sapiens147
9GCA_009679405.1Lacticaseibacillus rhamnosusBIOML-A2SAMN11946119Homo sapiens147
10GCA_009720565.1Lacticaseibacillus rhamnosusBIO5326SAMN13344000Homo sapiens147
11GCA_015548835.1Lacticaseibacillus rhamnosus1001283B150210_160208_A4SAMN15533335Homo sapiens147
12GCA_018228745.1Lacticaseibacillus rhamnosusX253SAMN18868053-147
13GCA_019967935.1Lacticaseibacillus rhamnosusCAU 1365SAMN20968817-147
14GCA_022220485.1Lacticaseibacillus rhamnosusVHProbi Y39SAMN23764977-147
15GCA_900636875.1Lacticaseibacillus rhamnosusNCTC13710SAMEA3881060-147
16GCA_902166035.1Lacticaseibacillus rhamnosus4928STDY7387919SAMEA4623334Homo sapiens147
17GCA_001435405.1Lacticaseibacillus rhamnosus DSM 20021 = JCM 1136 = NBRC 3425DSM 20021SAMN02369512-148
18GCA_002960215.1Lacticaseibacillus rhamnosusSCT-10-10-60SAMN06233708Homo sapiens148
19GCA_003433395.1Lacticaseibacillus rhamnosusATCC 11443SAMN07235705-148
20GCA_009679255.1Lacticaseibacillus rhamnosusBIOML-A10SAMN11946127Homo sapiens148
21GCA_009679355.1Lacticaseibacillus rhamnosusBIOML-A6SAMN11946123Homo sapiens148
22GCA_000418495.1Lacticaseibacillus rhamnosus LOCK908LOCK908SAMN02603329-149
23GCA_001590655.1Lacticaseibacillus rhamnosusASCC 290SAMN04530063-149
24GCA_002027355.1Lacticaseibacillus rhamnosusR709SAMN06480070-149
25GCA_003061645.1Lacticaseibacillus rhamnosusDS15_11SAMN05864078Homo sapiens149
26GCA_003052945.1Lacticaseibacillus rhamnosusDS13_11SAMN05864079Homo sapiens150
27GCA_900636965.1Lacticaseibacillus rhamnosusNCTC13764SAMEA3905380-150
28GCA_020844065.2Lacticaseibacillus rhamnosusIMI 507023SAMN22314508-152
29GCA_001656715.1Lacticaseibacillus rhamnosusLrh15SAMN03196633Homo sapiens153
30GCA_001831215.1Lacticaseibacillus rhamnosusASCC 3018SAMN05915697-153
31GCA_001657205.1Lacticaseibacillus rhamnosusLrh42SAMN03196661-154
32GCA_002849515.1Lacticaseibacillus rhamnosusNRRL B-442SAMN08239957-156
33GCA_000226235.1Lacticaseibacillus rhamnosus CASLCASLSAMN02471148-157
34GCA_001831275.1Lacticaseibacillus rhamnosusASCC 1521SAMN05915696-169
35GCA_007990855.1Lacticaseibacillus rhamnosus DSM 20021 = JCM 1136 = NBRC 3425NBRC 3425SAMD00169722-174
36GCA_001657155.1Lacticaseibacillus rhamnosusLrh12SAMN03196628Homo sapiens178
37GCA_000615245.1Lacticaseibacillus rhamnosus DSM 20021 = JCM 1136 = NBRC 3425JCM 1136SAMD00000741-187
38GCA_009679335.1Lacticaseibacillus rhamnosusBIOML-A4SAMN11946121Homo sapiens192
39GCA_009679395.1Lacticaseibacillus rhamnosusBIOML-A3SAMN11946120Homo sapiens192
40GCA_001067215.1Lacticaseibacillus rhamnosus769_LRHASAMN03197978Homo sapiens198
41GCA_001068195.1Lacticaseibacillus rhamnosus943_LRHASAMN03198163Homo sapiens198
42GCA_001065365.1Lacticaseibacillus rhamnosus541_LRHASAMN03197739Homo sapiens199
43GCA_001068045.1Lacticaseibacillus rhamnosus988_LRHASAMN03198209Homo sapiens199
44GCA_001063655.1Lacticaseibacillus rhamnosus526_LRHASAMN03197721Homo sapiens200
45GCA_001656605.1Lacticaseibacillus rhamnosusLrh26SAMN03196629Homo sapiens200
46GCA_009805825.1Lacticaseibacillus rhamnosusLrh40SAMN03729540Homo sapiens200
47GCA_014639015.1Lacticaseibacillus rhamnosusNCB 441SAMN15877747-200
48GCA_001066715.1Lacticaseibacillus rhamnosus870_LRHASAMN03198077Homo sapiens201
49GCA_002103185.1Lacticaseibacillus rhamnosusLrh47SAMN03769466Homo sapiens201
50GCA_013425605.1Lacticaseibacillus rhamnosusAMC0720SAMN15514053Homo sapiens201
51GCA_003129615.1Lacticaseibacillus rhamnosusTMC3115SAMN09099013-202
52GCA_003129645.1Lacticaseibacillus rhamnosusLR863SAMN09099009-202
53GCA_001656975.1Lacticaseibacillus rhamnosusLrh25SAMN03196619-203
54GCA_000026525.1Lacticaseibacillus rhamnosus Lc 705Lc 705SAMEA2272728-204
55GCA_009742715.1Lacticaseibacillus rhamnosusLR_AVKSAMN13198146-204
56GCA_013425645.1Lacticaseibacillus rhamnosusAMC0716SAMN15514052Homo sapiens204
57GCA_901971785.1Lacticaseibacillus rhamnosusINIA P344SAMEA5671947Homo sapiens204
58GCA_901971795.1Lacticaseibacillus rhamnosusINIA P540SAMEA5673845Homo sapiens204
59GCA_015549085.1Lacticaseibacillus rhamnosus1001311H_170123_H11SAMN15532621Homo sapiens205
60GCA_018365415.1Lacticaseibacillus rhamnosusL3_133_000G1_dasL3_133_000G1_concoct_81SAMN17800908Homo sapiens205
61GCA_001067885.1Lacticaseibacillus rhamnosus906_LRHASAMN03198113Homo sapiens206
62GCA_013425545.1Lacticaseibacillus rhamnosusAMC0709SAMN15514057Homo sapiens206
63GCA_013425665.1Lacticaseibacillus rhamnosusAMC0722SAMN15514050Homo sapiens206
64GCA_000160175.1Lacticaseibacillus rhamnosus LMS2-1LMS2-1SAMN00001479Homo sapiens207
65GCA_013425565.1Lacticaseibacillus rhamnosusAMC0707SAMN15514056Homo sapiens207
66GCA_013425735.1Lacticaseibacillus rhamnosusAMC0721SAMN15514049Homo sapiens207
67GCA_013425655.1Lacticaseibacillus rhamnosusAMC0714SAMN15514051Homo sapiens208
68GCA_020826335.1Lacticaseibacillus rhamnosusPMC203SAMN22826457Homo sapiens208
69GCA_013425555.1Lacticaseibacillus rhamnosusAMC0713SAMN15514055Homo sapiens209
70GCA_003061565.1Lacticaseibacillus rhamnosusDS17_11SAMN06464110Homo sapiens210
71GCA_003061605.1Lacticaseibacillus rhamnosusDS22_11SAMN06464112Homo sapiens210
72GCA_013425615.1Lacticaseibacillus rhamnosusAMC0710SAMN15514054Homo sapiens210
73GCA_901830395.1Lacticaseibacillus rhamnosusAMBR4SAMEA5665500-210
74GCA_000233755.1Lacticaseibacillus rhamnosus ATCC 8530ATCC 8530SAMN02604241-211
75GCA_900604925.1Lacticaseibacillus rhamnosusLactobacillus rhamnosus GR-1SAMEA4984995-212
76GCA_002762445.1Lacticaseibacillus rhamnosusGR-1SAMN07981099-213
77GCA_901830385.1Lacticaseibacillus rhamnosusAMBR3SAMEA5665499-213
78GCA_009679445.1Lacticaseibacillus rhamnosusBIOML-A1SAMN11946118Homo sapiens214
79GCA_019990845.1Lacticaseibacillus rhamnosuscek-R1SAMN21367937beet214
80GCA_013425725.1Lacticaseibacillus rhamnosusAMC0712SAMN15514048Homo sapiens215
81GCA_000414365.1Lacticaseibacillus rhamnosus CRL1505CRL1505SAMN02469462goat216
82GCA_000699985.1Lacticaseibacillus rhamnosus 51B51BSAMN02776192Homo sapiens216
83GCA_013425775.1Lacticaseibacillus rhamnosusAMC0706SAMN15514047Homo sapiens216
84GCA_001656675.1Lacticaseibacillus rhamnosusLrh20SAMN03196645Homo sapiens222
85GCA_001656635.1Lacticaseibacillus rhamnosusLrh23SAMN03196649Homo sapiens224
86GCA_001656895.1Lacticaseibacillus rhamnosusLrh30SAMN03196639Homo sapiens224
87GCA_001043995.1Lacticaseibacillus rhamnosusLr073SAMN03196656Homo sapiens228
88GCA_900248175.2Lacticaseibacillus rhamnosusLactobacillus rhamnosusSAMEA104458420-229
89GCA_001657005.1Lacticaseibacillus rhamnosusLrh24SAMN03196631goat233
90GCA_001657235.1Lacticaseibacillus rhamnosusLrh44SAMN03196663-247
91GCA_001657255.1Lacticaseibacillus rhamnosusLrh43SAMN03196662Homo sapiens259
92GCA_001656575.1Lacticaseibacillus rhamnosusLrh31SAMN03196651Homo sapiens277
93GCA_016887865.1Lacticaseibacillus rhamnosus1019SAMN17562092-290
94GCA_015160815.1Lacticaseibacillus rhamnosusRSI3SAMN16539238-296
95GCA_001005625.1Lacticaseibacillus rhamnosusCNCM-I-3698SAMN03465328Capra hircus298
96GCA_000466865.2Lacticaseibacillus rhamnosus 21662166SAMN02298796-300
97GCA_900070175.1Lacticaseibacillus rhamnosusBPL5SAMEA3879648-300
98GCA_001044405.1Lacticaseibacillus rhamnosus40fSAMN03766173Homo sapiens302
99GCA_016653515.1Lacticaseibacillus rhamnosusKF7SAMN17214539-302
100GCA_001368735.1Lacticaseibacillus rhamnosusBPL15SAMEA3158499-303