Rank Genome ID Species Strain BioSample ID Host Allelic distance ARGs VFs PGs PPRS
1GCA_002218815.1Lactobacillus crispatusUMNLC11SAMN04498983Meleagris gallopavo0
2GCA_002218845.1Lactobacillus crispatusUMNLC13SAMN04498985Meleagris gallopavo0
3GCA_002218685.1Lactobacillus crispatusUMNLC8SAMN04498980Meleagris gallopavo1
4GCA_002218855.1Lactobacillus crispatusUMNLC12SAMN04498984Meleagris gallopavo23
5GCA_002218805.1Lactobacillus crispatusUMNLC10SAMN04498982Meleagris gallopavo34
6GCA_002218765.1Lactobacillus crispatusUMNLC5SAMN04498977Meleagris gallopavo41
7GCA_002218695.1Lactobacillus crispatusUMNLC6SAMN04498978Meleagris gallopavo42
8GCA_002218895.1Lactobacillus crispatusUMNLC15SAMN04498987Meleagris gallopavo42
9GCA_002218615.1Lactobacillus crispatusUMNLC1SAMN04498973Meleagris gallopavo44
10GCA_002218885.1Lactobacillus crispatusUMNLC14SAMN04498986Meleagris gallopavo45
11GCA_002218775.1Lactobacillus crispatusUMNLC7SAMN04498979Meleagris gallopavo46
12GCA_002218925.1Lactobacillus crispatusUMNLC16SAMN04498988Meleagris gallopavo47
13GCA_001704465.1Lactobacillus crispatusC25SAMN05513271Gallus gallus108
14GCA_009933525.1Lactobacillus crispatusC25SAMN13634618Gallus gallus108
15GCA_008694205.1Lactobacillus crispatusNCK971SAMN12667796chicken109
16GCA_008694785.1Lactobacillus crispatusNCK988SAMN12667802chicken111
17GCA_004334905.1Lactobacillus crispatusCG-12SAMN09381451chicken114
18GCA_008694775.1Lactobacillus crispatusNCK2487SAMN12667804turkey114
19GCA_008694925.1Lactobacillus crispatusNCK969SAMN12667795chicken114
20GCA_002218565.1Lactobacillus crispatusUMNLC2SAMN04498974Meleagris gallopavo115
21GCA_002218645.1Lactobacillus crispatusUMNLC3SAMN04498975Meleagris gallopavo115
22GCA_002218655.1Lactobacillus crispatusUMNLC4SAMN04498976Meleagris gallopavo115
23GCA_002218735.1Lactobacillus crispatusUMNLC9SAMN04498981Meleagris gallopavo116
24GCA_009769205.1Lactobacillus crispatusDC21.1SAMN11372136Gallus gallus116
25GCA_012843585.1Lactobacillus crispatusWCA-383-APC-5ESAMN14558270Sus scrofa domesticus120
26GCA_014982905.1Lactobacillus crispatusDSM 108970SAMN16401879Gallus gallus120
27GCA_002218945.1Lactobacillus crispatusUMNLC18SAMN04498990Meleagris gallopavo122
28GCA_002218965.1Lactobacillus crispatusUMNLC19SAMN04498991Meleagris gallopavo122
29GCA_002218975.1Lactobacillus crispatusUMNLC20SAMN04498992Meleagris gallopavo122
30GCA_002219005.1Lactobacillus crispatusUMNLC21SAMN04498993Meleagris gallopavo122
31GCA_002219015.1Lactobacillus crispatusUMNLC24SAMN04498996Meleagris gallopavo122
32GCA_002219045.1Lactobacillus crispatusUMNLC22SAMN04498994Meleagris gallopavo122
33GCA_002219055.1Lactobacillus crispatusUMNLC25SAMN04498997Meleagris gallopavo122
34GCA_002219085.1Lactobacillus crispatusUMNLC23SAMN04498995Meleagris gallopavo122
35GCA_016162055.1Lactobacillus crispatusLB64SAMN15357369Gallus gallus122
36GCA_904419885.1Lactobacillus crispatusChicken_6_mag_147SAMEA7202438-122
37GCA_008694845.1Lactobacillus crispatusNCK974SAMN12667799chicken124
38GCA_008694935.1Lactobacillus crispatusNCK967SAMN12667794chicken124
39GCA_009857395.1Lactobacillus crispatusIndica2SAMN13743077Homo sapiens124
40GCA_016161975.1Lactobacillus crispatusLB69SAMN15357374Gallus gallus124
41GCA_016162005.1Lactobacillus crispatusLB67SAMN15357372Gallus gallus124
42GCA_904373365.1Lactobacillus crispatusChicken_10_mag_157SAMEA7202129-124
43GCA_904418835.1Lactobacillus crispatusChicken_1_mag_137SAMEA7202111-124
44GCA_930971225.1Lactobacillus crispatusERR3414571_bin.34_metaWRAP_v1.1_MAGSAMEA13008876-124
45GCA_017889145.1Lactobacillus crispatusMAG.130SAMN18359768Gallus gallus125
46GCA_008694765.1Lactobacillus crispatusNCK978SAMN12667801chicken126
47GCA_008694865.1Lactobacillus crispatusNCK973SAMN12667798chicken126
48GCA_008694875.1Lactobacillus crispatusNCK977SAMN12667800chicken126
49GCA_008694885.1Lactobacillus crispatusNCK972SAMN12667797chicken126
50GCA_904382375.1Lactobacillus crispatusChicken_19_mag_104SAMEA7202307-126
51GCA_001434005.1Lactobacillus crispatus DSM 20584 = JCM 1185DSM 20584SAMN02369387-127
52GCA_001567095.1Lactobacillus crispatusJCM 5810SAMN04498476Gallus gallus127
53GCA_002088015.1Lactobacillus crispatusATCC 33820SAMN06624125-127
54GCA_008694755.1Lactobacillus crispatusNCK2488SAMN12667805Homo sapiens127
55GCA_018987235.1Lactobacillus crispatusATCC 33820SAMN18472633Homo sapiens127
56GCA_019537355.1Lactobacillus crispatusUBLCp-01SAMN20447867Homo sapiens127
57GCA_007713895.1Lactobacillus crispatusNCK1350SAMN10922320Homo sapiens128
58GCA_013456995.1Lactobacillus crispatusB4SAMN15516019Homo sapiens128
59GCA_016901535.1Lactobacillus crispatusAn726SAMN14913593Gallus gallus128
60GCA_008694745.1Lactobacillus crispatusNCK1351SAMN12667803Homo sapiens129
61GCA_002811165.1Lactobacillus crispatusDISK12SAMN05770992Homo sapiens130
62GCA_020742315.1Lactobacillus crispatusCHK194-22301SAMN21194302chicken130
63GCA_904376895.1Lactobacillus crispatusChicken_14_mag_17SAMEA7202201-130
64GCA_000091765.1Lactobacillus crispatus ST1ST1SAMEA2272191-131
65GCA_000497065.1Lactobacillus crispatus EM-LC1EM-LC1SAMN02471465Homo sapiens131
66GCA_008079315.1Lactobacillus crispatusCIP 104459SAMN12395213Homo sapiens131
67GCA_013778545.1Lactobacillus crispatusDSM 29598SAMN14448840-131
68GCA_902386155.1Lactobacillus crispatusMGYG-HGUT-02348SAMEA5851852-131
69GCA_002863245.1Lactobacillus crispatusUMB0040SAMN08193691Homo sapiens133
70GCA_002861805.1Lactobacillus crispatusUMB0824SAMN08193690Homo sapiens134
71GCA_008694975.1Lactobacillus crispatusNCK953SAMN12667793chicken134
72GCA_008694985.1Lactobacillus crispatusNCK96SAMN12667791Homo sapiens134
73GCA_014654865.1Lactobacillus crispatusBC5SAMN13648610Homo sapiens134
74GCA_016161925.1Lactobacillus crispatusLB70SAMN15357375Gallus gallus135
75GCA_016162105.1Lactobacillus crispatusLB65SAMN15357370Gallus gallus135
76GCA_001700475.1Lactobacillus crispatusC037SAMN05244202Homo sapiens137
77GCA_002861815.1Lactobacillus crispatusUMB0085SAMN08193689Homo sapiens137
78GCA_008694965.1Lactobacillus crispatusNCK777SAMN12667792-137
79GCA_016161995.1Lactobacillus crispatusLB68SAMN15357373Gallus gallus137
80GCA_001541385.1Lactobacillus crispatusVMC3SAMN03893601Homo sapiens141
81GCA_001700485.1Lactobacillus crispatusOAB24-BSAMN05244207Homo sapiens142
82GCA_008868575.1Lactobacillus crispatusBIO6272SAMN12856537Homo sapiens142
83GCA_019278055.1Lactobacillus crispatus8.2SAMN18809434Homo sapiens142
84GCA_019278105.1Lactobacillus crispatus5.1SAMN18809432Homo sapiens142
85GCA_019278135.1Lactobacillus crispatus7.2SAMN18809433Homo sapiens142
86GCA_020887095.1Lactobacillus crispatusKT-11SAMD00404900Homo sapiens143
87GCA_000161915.2Lactobacillus crispatus MV-1A-USMV-1A-USSAMN02463726Homo sapiens144
88GCA_001541405.1Lactobacillus crispatusVMC4SAMN03893602Homo sapiens144
89GCA_001563615.1Lactobacillus crispatusPSS7772CSAMN03854351Homo sapiens144
90GCA_016162045.1Lactobacillus crispatusLB66SAMN15357371Gallus gallus144
91GCA_020042125.1Lactobacillus crispatusLc1226SAMN21367958Homo sapiens144
92GCA_022454895.1Lactobacillus crispatusCM_G12_S863-bin_1SAMN25207450Homo sapiens144
93GCA_022455325.1Lactobacillus crispatusCM_D05_S804-bin_1SAMN25207420Homo sapiens144
94GCA_022455355.1Lactobacillus crispatusCM_D03_S788-bin_1SAMN25207418Homo sapiens144
95GCA_022455695.1Lactobacillus crispatusCM_A02_S777-bin_1SAMN25207396Homo sapiens144
96GCA_022456975.1Lactobacillus crispatus233_S810-bin_1SAMN25207677Homo sapiens144
97GCA_022456995.1Lactobacillus crispatusDZD_CM_40_S808-bin_1SAMN25207666Homo sapiens144
98GCA_000160515.1Lactobacillus crispatus JV-V01JV-V01SAMN00002229Homo sapiens145
99GCA_013487905.1Lactobacillus crispatus1DSAMN13624824Equus caballus145
100GCA_022453955.1Lactobacillus crispatusMitchell_12_29_17_H06_S624-bin_1SAMN25207504Homo sapiens145