Document

Rank	Genome ID	Species	Strain	BioSample ID	Host	Allelic distance	ARGs	VFs	PGs	PPRS
1	GCA_002289605.1	Ligilactobacillus salivarius	KLA003	SAMN05003793	pig	0	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
2	GCA_002289625.1	Ligilactobacillus salivarius	KLA004	SAMN05003794	pig	6	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
3	GCA_002289965.1	Ligilactobacillus salivarius	KLA005	SAMN05003795	pig	6	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
4	GCA_002289615.1	Ligilactobacillus salivarius	KLA002	SAMN05003792	pig	8	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
5	GCA_002289675.1	Ligilactobacillus salivarius	KLA006	SAMN05003796	pig	9	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
6	GCA_002289985.1	Ligilactobacillus salivarius	KLA001	SAMN05003791	pig	9	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
7	GCA_002289845.1	Ligilactobacillus salivarius	KLW005	SAMN05003808	pig	454	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
8	GCA_002135095.1	Ligilactobacillus salivarius	KLW001	SAMN05003804	pig	455	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
9	GCA_002289905.1	Ligilactobacillus salivarius	KLW008	SAMN05003811	pig	455	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
10	GCA_002289925.1	Ligilactobacillus salivarius	KLW009	SAMN05003812	pig	455	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
11	GCA_002289785.1	Ligilactobacillus salivarius	KLW002	SAMN05003805	pig	456	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
12	GCA_002289725.1	Ligilactobacillus salivarius	KLF005	SAMN05003801	pig	490	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
13	GCA_002289745.1	Ligilactobacillus salivarius	KLF007	SAMN05003803	pig	515	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
14	GCA_002289795.1	Ligilactobacillus salivarius	KLW004	SAMN05003807	pig	520	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
15	GCA_002289815.1	Ligilactobacillus salivarius	KLW003	SAMN05003806	pig	520	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
16	GCA_002289865.1	Ligilactobacillus salivarius	KLW006	SAMN05003809	pig	525	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
17	GCA_002289935.1	Ligilactobacillus salivarius	KLW010	SAMN05003813	pig	525	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
18	GCA_002289875.1	Ligilactobacillus salivarius	KLW007	SAMN05003810	pig	533	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
19	GCA_015070845.1	Ligilactobacillus salivarius	144	SAMN16481732	Sus scrofa	537	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
20	GCA_015070925.1	Ligilactobacillus salivarius	160	SAMN16481734	Sus scrofa	537	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
21	GCA_002289685.1	Ligilactobacillus salivarius	KLF003	SAMN05003799	pig	545	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
22	GCA_002289665.1	Ligilactobacillus salivarius	KLF002	SAMN05003798	pig	549	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
23	GCA_002289735.1	Ligilactobacillus salivarius	KLF004	SAMN05003800	pig	550	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
24	GCA_013401955.1	Ligilactobacillus salivarius	FFIG23	SAMN15430185	Sus scrofa	565	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
25	GCA_012843615.1	Ligilactobacillus salivarius	WCA-389-WT-5E	SAMN14558269	Sus scrofa domesticus	571	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
26	GCA_013401855.1	Ligilactobacillus salivarius	FFIG58	SAMN15418202	Sus scrofa	581	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
27	GCA_014841055.1	Ligilactobacillus salivarius	ZLp4b	SAMN16131617	swine	594	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
28	GCA_013401965.1	Ligilactobacillus salivarius	FFIG53	SAMN15430186	Sus scrofa	597	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
29	GCA_013402005.1	Ligilactobacillus salivarius	FFIG60	SAMN15430187	Sus scrofa	604	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
30	GCA_013401895.1	Ligilactobacillus salivarius	FFIG130	SAMN15430191	Sus scrofa	649	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
31	GCA_013401905.1	Ligilactobacillus salivarius	FFIG124	SAMN15430190	Sus scrofa	662	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
32	GCA_013401865.1	Ligilactobacillus salivarius	FFIG63	SAMN15430188	Sus scrofa	694	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
33	GCA_013401915.1	Ligilactobacillus salivarius	FFIG79	SAMN15430189	Sus scrofa	706	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
34	GCA_021266585.1	Ligilactobacillus salivarius	BNS11	SAMN24045799	Pig	758	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
35	GCA_000529385.1	Ligilactobacillus salivarius	cp400	SAMEA3138854	-	760	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
36	GCA_021531535.1	Ligilactobacillus salivarius	An879	SAMN15872553	Sus scrofa	761	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
37	GCA_002162055.1	Ligilactobacillus salivarius	ZLS006	SAMN06698339	piglet	795	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
38	GCA_000758365.1	Ligilactobacillus salivarius	JCM1046	SAMN02711722	swine	805	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
39	GCA_000159395.1	Ligilactobacillus salivarius	ATCC 11741	SAMN00001483	Homo sapiens	838	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
40	GCA_001435955.1	Ligilactobacillus salivarius	DSM 20555	SAMN02369414	-	838	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
41	GCA_002736025.1	Ligilactobacillus salivarius	BCRC 14759	SAMN07807134	Homo sapiens	838	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
42	GCA_003052845.1	Ligilactobacillus salivarius	DS3_12	SAMN05942026	Homo sapiens	838	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
43	GCA_003052875.1	Ligilactobacillus salivarius	DS13_12	SAMN05942024	Homo sapiens	838	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
44	GCA_003061545.1	Ligilactobacillus salivarius	DS11_12	SAMN05942023	Homo sapiens	838	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
45	GCA_013249205.1	Ligilactobacillus salivarius	BIO6313	SAMN14848239	-	838	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
46	GCA_015159735.1	Ligilactobacillus salivarius	UBLS-22	SAMN16435603	Homo sapiens	838	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
47	GCA_015560415.1	Ligilactobacillus salivarius	1001270B_150601_C6	SAMN15532378	Homo sapiens	838	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
48	GCA_002079545.1	Ligilactobacillus salivarius	gul2	SAMN06163263	-	839	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
49	GCA_002079565.1	Ligilactobacillus salivarius	gul1	SAMN06163262	-	839	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
50	GCA_003061585.1	Ligilactobacillus salivarius	DS2_12	SAMN05942025	Homo sapiens	839	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
51	GCA_018372595.1	Ligilactobacillus salivarius	L3_072_362G1_dasL3_072_362G1_metabat.metabat.3	SAMN17801549	Homo sapiens	840	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
52	GCA_008016885.1	Ligilactobacillus salivarius	C12	SAMN11812293	wild boar	850	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
53	GCA_002079465.1	Ligilactobacillus salivarius	JCM 1045	SAMN06163267	-	851	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
54	GCA_008016915.1	Ligilactobacillus salivarius	C2	SAMN11812292	wild boar	851	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
55	GCA_019593595.1	Ligilactobacillus salivarius	C3	SAMN11831040	wild boar	851	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
56	GCA_002250405.1	Ligilactobacillus salivarius	L28	SAMN06763640	-	854	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
57	GCA_002735985.1	Ligilactobacillus salivarius	BCRC 12574	SAMN07792363	Homo sapiens	856	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
58	GCA_002079585.1	Ligilactobacillus salivarius	DSM 20554	SAMN06163261	-	857	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
59	GCA_015560055.1	Ligilactobacillus salivarius	1001287B_170213_E2	SAMN15532471	Homo sapiens	865	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
60	GCA_900094615.1	Ligilactobacillus salivarius	LPM01	SAMEA4359642	-	870	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
61	GCA_003472615.1	Ligilactobacillus salivarius	AM09-40	SAMN09734758	Homo sapiens	871	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
62	GCA_013487885.1	Ligilactobacillus salivarius	2D	SAMN13624825	Equus caballus	871	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
63	GCA_002079595.1	Ligilactobacillus salivarius	DSM 20492	SAMN06163260	-	874	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
64	GCA_002079645.1	Ligilactobacillus salivarius	CCuG47171	SAMN06163257	-	884	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
65	GCA_009866035.1	Ligilactobacillus salivarius	FYNDL6_3.scaf	SAMN12616953	Homo sapiens	889	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
66	GCA_002079505.1	Ligilactobacillus salivarius	JCM 1042	SAMN06163265	-	892	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
67	GCA_002079485.1	Ligilactobacillus salivarius	JCM 1044	SAMN06163266	-	893	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
68	GCA_002079745.1	Ligilactobacillus salivarius	CCuG2753OB	SAMN06163253	-	893	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
69	GCA_009865735.1	Ligilactobacillus salivarius	NT4_8	SAMN12616969	Homo sapiens	893	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
70	GCA_002079365.1	Ligilactobacillus salivarius	NCIMB8816	SAMN06163274	-	894	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
71	GCA_009863885.1	Ligilactobacillus salivarius	FBJSY20_2	SAMN12616902	Homo sapiens	895	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
72	GCA_009863495.1	Ligilactobacillus salivarius	FJLHD7M2	SAMN12616921	Homo sapiens	896	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
73	GCA_009863715.1	Ligilactobacillus salivarius	FGSYC47M10	SAMN12616908	Homo sapiens	896	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
74	GCA_009863905.1	Ligilactobacillus salivarius	FAHBZ_8M2	SAMN12616901	Homo sapiens	896	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
75	GCA_009869975.1	Ligilactobacillus salivarius	FWXBH3_1.scaf	SAMN12616938	Homo sapiens	896	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
76	GCA_009870215.1	Ligilactobacillus salivarius	FXJSW20M4_2	SAMN12616947	Homo sapiens	896	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
77	GCA_015552175.1	Ligilactobacillus salivarius	D6t1_180914_C6	SAMN15533087	Homo sapiens	896	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
78	GCA_009866115.1	Ligilactobacillus salivarius	FXJKS25M8	SAMN12616946	Homo sapiens	897	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
79	GCA_009863635.1	Ligilactobacillus salivarius	FJLHD24M1	SAMN12616915	Homo sapiens	898	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
80	GCA_009869955.1	Ligilactobacillus salivarius	HENA17_3	SAMN12616963	Homo sapiens	898	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
81	GCA_015548605.1	Ligilactobacillus salivarius	1001095A_150126_H2	SAMN15532380	Homo sapiens	898	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
82	GCA_009866015.1	Ligilactobacillus salivarius	FYNDL2_4.scaf	SAMN12616951	Homo sapiens	899	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
83	GCA_002079715.1	Ligilactobacillus salivarius	CCuG38008	SAMN06163254	-	900	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
84	GCA_009863535.1	Ligilactobacillus salivarius	FJLHD32M4	SAMN12616919	Homo sapiens	900	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
85	GCA_009863605.1	Ligilactobacillus salivarius	FJLHD25M7	SAMN12616916	Homo sapiens	900	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
86	GCA_009863365.1	Ligilactobacillus salivarius	FNXYC6M7	SAMN12616929	Homo sapiens	901	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
87	GCA_009863835.1	Ligilactobacillus salivarius	FCQHC8_L1	SAMN12616904	Homo sapiens	901	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
88	GCA_009865885.1	Ligilactobacillus salivarius	FZJTZ69_1	SAMN12616961	Homo sapiens	901	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
89	GCA_009865925.1	Ligilactobacillus salivarius	FZJTZ27M6_2	SAMN12616958	Homo sapiens	901	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
90	GCA_009865965.1	Ligilactobacillus salivarius	FZJTZ13M4	SAMN12616956	Homo sapiens	901	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
91	GCA_009869985.1	Ligilactobacillus salivarius	FZJTZ28M4.scaf	SAMN12616959	Homo sapiens	901	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
92	GCA_016900035.1	Ligilactobacillus salivarius	An813	SAMN14913633	Gallus gallus	901	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
93	GCA_905187955.1	Ligilactobacillus salivarius	SRR7721880-bin.11	SAMEA7848333	-	901	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
94	GCA_003470145.1	Ligilactobacillus salivarius	AM25-8	SAMN09736323	Homo sapiens	902	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
95	GCA_009863485.1	Ligilactobacillus salivarius	FJSWX10_2	SAMN12616923	Homo sapiens	902	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
96	GCA_009863555.1	Ligilactobacillus salivarius	FJLHD2M8	SAMN12616918	Homo sapiens	902	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
97	GCA_009863695.1	Ligilactobacillus salivarius	FJLHD14M6	SAMN12616912	Homo sapiens	902	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
98	GCA_009865785.1	Ligilactobacillus salivarius	NT15_1	SAMN12616967	Homo sapiens	902	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
99	GCA_009866125.1	Ligilactobacillus salivarius	FXJCJ9_2.scaf	SAMN12616944	Homo sapiens	902	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
100	GCA_009866135.1	Ligilactobacillus salivarius	FXJSW2_3.scaf	SAMN12616948	Homo sapiens	902	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score

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