Document

Rank	Genome ID	Species	Strain	BioSample ID	Host	Allelic distance	ARGs	VFs	PGs	PPRS
1	GCA_003062005.1	Lactobacillus acidophilus	DS2_1A	SAMN05583785	Homo sapiens	0	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
2	GCA_003053245.1	Lactobacillus acidophilus	DS10_1A	SAMN05583778	Homo sapiens	15	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
3	GCA_003061925.1	Lactobacillus acidophilus	DS9_1A	SAMN05583792	Homo sapiens	15	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
4	GCA_003061965.1	Lactobacillus acidophilus	DS13_1A	SAMN05583782	Homo sapiens	15	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
5	GCA_017009695.1	Lactobacillus acidophilus	BCRC 80064	SAMN14371424	Homo sapiens	15	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
6	GCA_003061905.1	Lactobacillus acidophilus	DS13_1B	SAMN05583783	Homo sapiens	16	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
7	GCA_003061945.1	Lactobacillus acidophilus	DS8_1A	SAMN05583791	Homo sapiens	16	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
8	GCA_003061985.1	Lactobacillus acidophilus	DS5_1A	SAMN05583788	Homo sapiens	16	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
9	GCA_003062025.1	Lactobacillus acidophilus	DS11_1A	SAMN05583779	Homo sapiens	16	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
10	GCA_008868625.1	Lactobacillus acidophilus	BIO6307	SAMN12856535	Homo sapiens	16	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
11	GCA_003053135.1	Lactobacillus acidophilus	DS24_1	SAMN06464090	Homo sapiens	17	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
12	GCA_021229035.1	Lactobacillus acidophilus	NBIMCC 8242 (180)	SAMN23827470	-	18	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
13	GCA_002406675.1	Lactobacillus acidophilus	P2	SAMN07665576	-	19	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
14	GCA_002914945.1	Lactobacillus acidophilus	LMG P-21904	SAMN07187785	-	19	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
15	GCA_013867605.1	Lactobacillus acidophilus	s-13	SAMN15579847	-	20	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
16	GCA_013342945.1	Lactobacillus acidophilus	LA-G80-111	SAMN15165794	Homo sapiens	21	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
17	GCA_018252545.1	Lactobacillus acidophilus	LA-G80	SAMN18679498	-	21	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
18	GCA_000389675.2	Lactobacillus acidophilus La-14	La-14	SAMN02603216	-	22	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
19	GCA_017009515.1	Lactobacillus acidophilus	BCRC 14065	SAMN14363925	-	23	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
20	GCA_000934625.1	Lactobacillus acidophilus	FSI4	SAMN03274004	-	24	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
21	GCA_003061885.1	Lactobacillus acidophilus	DS20_1	SAMN06464087	Homo sapiens	24	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
22	GCA_017009485.1	Lactobacillus acidophilus	BCRC 12255	SAMN14363914	-	24	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
23	GCA_018367455.1	Lactobacillus acidophilus	L3_101_000G1_dasL3_101_000G1_metabat.metabat.48	SAMN17800807	Homo sapiens	24	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
24	GCA_905206005.1	Lactobacillus acidophilus	ERR1430463-bin.9	SAMEA7846681	-	24	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
25	GCA_000442865.1	Lactobacillus acidophilus CIRM-BIA 442	CIRM-BIA 442	SAMEA2272381	-	25	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
26	GCA_003062045.1	Lactobacillus acidophilus	DS1_1A	SAMN05583775	Homo sapiens	25	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
27	GCA_017009605.1	Lactobacillus acidophilus	BCRC 16099	SAMN14371312	-	25	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
28	GCA_003641085.1	Lactobacillus acidophilus	UBLA-34	SAMN10136005	-	26	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
29	GCA_017009715.1	Lactobacillus acidophilus	La-5	SAMN14401351	-	26	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
30	GCA_017695935.1	Lactobacillus acidophilus	APC2845	SAMN13342918	Homo sapiens	27	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
31	GCA_002286215.1	Lactobacillus acidophilus	LA1	SAMN05631052	Homo sapiens	33	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
32	GCA_002224305.1	Lactobacillus acidophilus	ATCC 53544	SAMN07357495	Homo sapiens	41	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
33	GCA_001868765.1	Lactobacillus acidophilus	KLDS 1.0901	SAMN05949236	-	45	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
34	GCA_000497795.1	Lactobacillus acidophilus CFH	CFH	SAMN02401339	-	54	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
35	GCA_001639165.1	Lactobacillus acidophilus	WG-LB-IV	SAMN04628015	-	61	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
36	GCA_009742735.1	Lactobacillus acidophilus	LA_AVK1	SAMN13198235	-	78	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
37	GCA_009741835.1	Lactobacillus acidophilus	LA_AVK2	SAMN13198280	-	79	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
38	GCA_000011985.1	Lactobacillus acidophilus NCFM	NCFM	SAMN02603047	-	87	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
39	GCA_004348805.1	Lactobacillus acidophilus	PNW3	SAMN10979321	Sus scrofa domesticus	113	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
40	GCA_017009595.1	Lactobacillus acidophilus	BCRC 17008	SAMN14371317	Homo sapiens	146	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
41	GCA_001591845.1	Lactobacillus acidophilus DSM 20079 = JCM 1132 = NBRC 13951 = CIP 76.13	NBRC 13951	SAMD00046914	-	159	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
42	GCA_017009655.1	Lactobacillus acidophilus	BCRC 17481	SAMN14371318	-	160	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
43	GCA_013867555.1	Lactobacillus acidophilus	s-4	SAMN15579838	-	161	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
44	GCA_022509485.1	Lactobacillus acidophilus	QAULAN51	SAMN20114166	-	161	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
45	GCA_003047065.1	Lactobacillus acidophilus	DSM 20079	SAMN06606133	Homo sapiens	168	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
46	GCA_000469745.1	Lactobacillus acidophilus DSM 9126	DSM 9126	SAMEA2272239	-	170	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
47	GCA_017009725.1	Lactobacillus acidophilus	LA1063	SAMN14422845	-	176	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
48	GCA_017009575.1	Lactobacillus acidophilus	BCRC 16092	SAMN14363928	-	177	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
49	GCA_000786395.1	Lactobacillus acidophilus	ATCC 4356	SAMN03105773	Homo sapiens	180	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
50	GCA_000469705.1	Lactobacillus acidophilus DSM 20079 = JCM 1132 = NBRC 13951 = CIP 76.13	CIP 76.13	SAMEA2272342	-	184	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
51	GCA_001433895.1	Lactobacillus acidophilus DSM 20079 = JCM 1132 = NBRC 13951 = CIP 76.13	DSM 20079	SAMN02369388	Homo sapiens	194	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
52	GCA_000442825.1	Lactobacillus acidophilus DSM 20242	DSM 20242	SAMEA2272474	-	201	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
53	GCA_001950045.1	Lactobacillus acidophilus	L-55	SAMD00064210	-	234	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
54	GCA_902386525.1	Lactobacillus acidophilus	MGYG-HGUT-02379	SAMEA5851883	-	234	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
55	GCA_000469765.1	Lactobacillus acidophilus CIRM-BIA 445	CIRM-BIA 445	SAMEA2272655	-	244	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
56	GCA_021432145.1	Lactobacillus acidophilus	5460	SAMN24563600	Homo sapiens	248	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
57	GCA_020883435.1	Lactobacillus acidophilus	NC55	SAMN23011956	-	253	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
58	GCA_000615165.1	Lactobacillus acidophilus DSM 20079 = JCM 1132 = NBRC 13951 = CIP 76.13	JCM 1132	SAMD00013701	-	268	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
59	GCA_017009475.1	Lactobacillus acidophilus	BCRC 14079	SAMN14363926	-	282	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
60	GCA_000159715.1	Lactobacillus acidophilus ATCC 4796	ATCC 4796	SAMN00001471	Homo sapiens	285	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
61	GCA_020683265.1	Lactobacillus acidophilus	JBNU_C5	SAMN20843274	Canine	318	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
62	GCA_017009585.1	Lactobacillus acidophilus	BCRC 17486	SAMN14371319	Homo sapiens	441	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
63	GCA_000497815.1	Lactobacillus acidophilus CFH	CFH	SAMN02401338	-	866	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
64	GCA_003952845.1	Lactobacillus acidophilus	YT1	SAMN08142761	rat	1121	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
65	GCA_900452495.1	Lactobacillus acidophilus	NCTC13721	SAMEA3881062	Human (Woman)	1623	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score

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Pathogenic genes

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