Document

Rank	Genome ID	Species	Strain	BioSample ID	Host	Allelic distance	ARGs	VFs	PGs	PPRS
1	GCA_008694785.1	Lactobacillus crispatus	NCK988	SAMN12667802	chicken	0	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
2	GCA_008694925.1	Lactobacillus crispatus	NCK969	SAMN12667795	chicken	6	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
3	GCA_008694205.1	Lactobacillus crispatus	NCK971	SAMN12667796	chicken	9	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
4	GCA_008694765.1	Lactobacillus crispatus	NCK978	SAMN12667801	chicken	101	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
5	GCA_008694865.1	Lactobacillus crispatus	NCK973	SAMN12667798	chicken	101	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
6	GCA_008694885.1	Lactobacillus crispatus	NCK972	SAMN12667797	chicken	101	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
7	GCA_008694875.1	Lactobacillus crispatus	NCK977	SAMN12667800	chicken	103	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
8	GCA_008694845.1	Lactobacillus crispatus	NCK974	SAMN12667799	chicken	104	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
9	GCA_008694935.1	Lactobacillus crispatus	NCK967	SAMN12667794	chicken	104	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
10	GCA_009769205.1	Lactobacillus crispatus	DC21.1	SAMN11372136	Gallus gallus	107	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
11	GCA_016162055.1	Lactobacillus crispatus	LB64	SAMN15357369	Gallus gallus	109	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
12	GCA_001704465.1	Lactobacillus crispatus	C25	SAMN05513271	Gallus gallus	110	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
13	GCA_002218735.1	Lactobacillus crispatus	UMNLC9	SAMN04498981	Meleagris gallopavo	110	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
14	GCA_009933525.1	Lactobacillus crispatus	C25	SAMN13634618	Gallus gallus	110	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
15	GCA_017889145.1	Lactobacillus crispatus	MAG.130	SAMN18359768	Gallus gallus	110	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
16	GCA_002218685.1	Lactobacillus crispatus	UMNLC8	SAMN04498980	Meleagris gallopavo	111	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
17	GCA_002218815.1	Lactobacillus crispatus	UMNLC11	SAMN04498983	Meleagris gallopavo	111	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
18	GCA_002218845.1	Lactobacillus crispatus	UMNLC13	SAMN04498985	Meleagris gallopavo	111	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
19	GCA_002218775.1	Lactobacillus crispatus	UMNLC7	SAMN04498979	Meleagris gallopavo	113	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
20	GCA_002218895.1	Lactobacillus crispatus	UMNLC15	SAMN04498987	Meleagris gallopavo	113	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
21	GCA_004334905.1	Lactobacillus crispatus	CG-12	SAMN09381451	chicken	113	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
22	GCA_002218765.1	Lactobacillus crispatus	UMNLC5	SAMN04498977	Meleagris gallopavo	114	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
23	GCA_002218805.1	Lactobacillus crispatus	UMNLC10	SAMN04498982	Meleagris gallopavo	115	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
24	GCA_002218855.1	Lactobacillus crispatus	UMNLC12	SAMN04498984	Meleagris gallopavo	115	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
25	GCA_012843585.1	Lactobacillus crispatus	WCA-383-APC-5E	SAMN14558270	Sus scrofa domesticus	115	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
26	GCA_014982905.1	Lactobacillus crispatus	DSM 108970	SAMN16401879	Gallus gallus	115	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
27	GCA_016162005.1	Lactobacillus crispatus	LB67	SAMN15357372	Gallus gallus	115	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
28	GCA_002218615.1	Lactobacillus crispatus	UMNLC1	SAMN04498973	Meleagris gallopavo	116	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
29	GCA_002218925.1	Lactobacillus crispatus	UMNLC16	SAMN04498988	Meleagris gallopavo	116	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
30	GCA_002218695.1	Lactobacillus crispatus	UMNLC6	SAMN04498978	Meleagris gallopavo	117	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
31	GCA_904419885.1	Lactobacillus crispatus	Chicken_6_mag_147	SAMEA7202438	-	117	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
32	GCA_016161975.1	Lactobacillus crispatus	LB69	SAMN15357374	Gallus gallus	118	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
33	GCA_904382375.1	Lactobacillus crispatus	Chicken_19_mag_104	SAMEA7202307	-	118	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
34	GCA_001567095.1	Lactobacillus crispatus	JCM 5810	SAMN04498476	Gallus gallus	119	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
35	GCA_002218885.1	Lactobacillus crispatus	UMNLC14	SAMN04498986	Meleagris gallopavo	119	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
36	GCA_008694775.1	Lactobacillus crispatus	NCK2487	SAMN12667804	turkey	120	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
37	GCA_002218975.1	Lactobacillus crispatus	UMNLC20	SAMN04498992	Meleagris gallopavo	121	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
38	GCA_002219005.1	Lactobacillus crispatus	UMNLC21	SAMN04498993	Meleagris gallopavo	121	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
39	GCA_002219015.1	Lactobacillus crispatus	UMNLC24	SAMN04498996	Meleagris gallopavo	121	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
40	GCA_002219045.1	Lactobacillus crispatus	UMNLC22	SAMN04498994	Meleagris gallopavo	121	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
41	GCA_002219055.1	Lactobacillus crispatus	UMNLC25	SAMN04498997	Meleagris gallopavo	121	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
42	GCA_002219085.1	Lactobacillus crispatus	UMNLC23	SAMN04498995	Meleagris gallopavo	121	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
43	GCA_904373365.1	Lactobacillus crispatus	Chicken_10_mag_157	SAMEA7202129	-	121	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
44	GCA_020742315.1	Lactobacillus crispatus	CHK194-22301	SAMN21194302	chicken	122	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
45	GCA_002218565.1	Lactobacillus crispatus	UMNLC2	SAMN04498974	Meleagris gallopavo	123	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
46	GCA_002218645.1	Lactobacillus crispatus	UMNLC3	SAMN04498975	Meleagris gallopavo	123	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
47	GCA_002218655.1	Lactobacillus crispatus	UMNLC4	SAMN04498976	Meleagris gallopavo	123	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
48	GCA_904418835.1	Lactobacillus crispatus	Chicken_1_mag_137	SAMEA7202111	-	123	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
49	GCA_930971225.1	Lactobacillus crispatus	ERR3414571_bin.34_metaWRAP_v1.1_MAG	SAMEA13008876	-	123	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
50	GCA_007713895.1	Lactobacillus crispatus	NCK1350	SAMN10922320	Homo sapiens	124	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
51	GCA_016901535.1	Lactobacillus crispatus	An726	SAMN14913593	Gallus gallus	124	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
52	GCA_009857395.1	Lactobacillus crispatus	Indica2	SAMN13743077	Homo sapiens	125	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
53	GCA_013778545.1	Lactobacillus crispatus	DSM 29598	SAMN14448840	-	125	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
54	GCA_904376895.1	Lactobacillus crispatus	Chicken_14_mag_17	SAMEA7202201	-	125	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
55	GCA_000091765.1	Lactobacillus crispatus ST1	ST1	SAMEA2272191	-	126	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
56	GCA_001434005.1	Lactobacillus crispatus DSM 20584 = JCM 1185	DSM 20584	SAMN02369387	-	127	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
57	GCA_002088015.1	Lactobacillus crispatus	ATCC 33820	SAMN06624125	-	127	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
58	GCA_002811165.1	Lactobacillus crispatus	DISK12	SAMN05770992	Homo sapiens	127	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
59	GCA_008694745.1	Lactobacillus crispatus	NCK1351	SAMN12667803	Homo sapiens	127	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
60	GCA_008694755.1	Lactobacillus crispatus	NCK2488	SAMN12667805	Homo sapiens	127	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
61	GCA_014654865.1	Lactobacillus crispatus	BC5	SAMN13648610	Homo sapiens	127	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
62	GCA_018987235.1	Lactobacillus crispatus	ATCC 33820	SAMN18472633	Homo sapiens	127	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
63	GCA_019537355.1	Lactobacillus crispatus	UBLCp-01	SAMN20447867	Homo sapiens	127	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
64	GCA_000497065.1	Lactobacillus crispatus EM-LC1	EM-LC1	SAMN02471465	Homo sapiens	130	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
65	GCA_013456995.1	Lactobacillus crispatus	B4	SAMN15516019	Homo sapiens	130	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
66	GCA_902386155.1	Lactobacillus crispatus	MGYG-HGUT-02348	SAMEA5851852	-	130	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
67	GCA_002861805.1	Lactobacillus crispatus	UMB0824	SAMN08193690	Homo sapiens	131	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
68	GCA_016161925.1	Lactobacillus crispatus	LB70	SAMN15357375	Gallus gallus	131	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
69	GCA_002218945.1	Lactobacillus crispatus	UMNLC18	SAMN04498990	Meleagris gallopavo	132	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
70	GCA_002218965.1	Lactobacillus crispatus	UMNLC19	SAMN04498991	Meleagris gallopavo	132	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
71	GCA_016161995.1	Lactobacillus crispatus	LB68	SAMN15357373	Gallus gallus	132	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
72	GCA_019278055.1	Lactobacillus crispatus	8.2	SAMN18809434	Homo sapiens	134	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
73	GCA_019278105.1	Lactobacillus crispatus	5.1	SAMN18809432	Homo sapiens	134	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
74	GCA_019278135.1	Lactobacillus crispatus	7.2	SAMN18809433	Homo sapiens	134	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
75	GCA_008079315.1	Lactobacillus crispatus	CIP 104459	SAMN12395213	Homo sapiens	135	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
76	GCA_016162045.1	Lactobacillus crispatus	LB66	SAMN15357371	Gallus gallus	136	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
77	GCA_016162105.1	Lactobacillus crispatus	LB65	SAMN15357370	Gallus gallus	136	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
78	GCA_002863245.1	Lactobacillus crispatus	UMB0040	SAMN08193691	Homo sapiens	137	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
79	GCA_008694965.1	Lactobacillus crispatus	NCK777	SAMN12667792	-	138	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
80	GCA_008868575.1	Lactobacillus crispatus	BIO6272	SAMN12856537	Homo sapiens	138	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
81	GCA_008694975.1	Lactobacillus crispatus	NCK953	SAMN12667793	chicken	139	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
82	GCA_008694985.1	Lactobacillus crispatus	NCK96	SAMN12667791	Homo sapiens	139	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
83	GCA_001541385.1	Lactobacillus crispatus	VMC3	SAMN03893601	Homo sapiens	140	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
84	GCA_001700475.1	Lactobacillus crispatus	C037	SAMN05244202	Homo sapiens	140	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
85	GCA_002861815.1	Lactobacillus crispatus	UMB0085	SAMN08193689	Homo sapiens	140	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
86	GCA_905196795.1	Lactobacillus crispatus	SRR341660-bin.2	SAMEA7847946	-	142	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
87	GCA_001541405.1	Lactobacillus crispatus	VMC4	SAMN03893602	Homo sapiens	143	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
88	GCA_020042125.1	Lactobacillus crispatus	Lc1226	SAMN21367958	Homo sapiens	143	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
89	GCA_020887095.1	Lactobacillus crispatus	KT-11	SAMD00404900	Homo sapiens	143	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
90	GCA_000161915.2	Lactobacillus crispatus MV-1A-US	MV-1A-US	SAMN02463726	Homo sapiens	144	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
91	GCA_001700485.1	Lactobacillus crispatus	OAB24-B	SAMN05244207	Homo sapiens	144	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
92	GCA_022455325.1	Lactobacillus crispatus	CM_D05_S804-bin_1	SAMN25207420	Homo sapiens	144	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
93	GCA_022455355.1	Lactobacillus crispatus	CM_D03_S788-bin_1	SAMN25207418	Homo sapiens	144	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
94	GCA_022455695.1	Lactobacillus crispatus	CM_A02_S777-bin_1	SAMN25207396	Homo sapiens	144	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
95	GCA_022456975.1	Lactobacillus crispatus	233_S810-bin_1	SAMN25207677	Homo sapiens	144	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
96	GCA_022456995.1	Lactobacillus crispatus	DZD_CM_40_S808-bin_1	SAMN25207666	Homo sapiens	144	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
97	GCA_000160515.1	Lactobacillus crispatus JV-V01	JV-V01	SAMN00002229	Homo sapiens	145	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
98	GCA_001541535.1	Lactobacillus crispatus	VMC7	SAMN03893605	Homo sapiens	145	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
99	GCA_001563615.1	Lactobacillus crispatus	PSS7772C	SAMN03854351	Homo sapiens	145	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
100	GCA_022453955.1	Lactobacillus crispatus	Mitchell_12_29_17_H06_S624-bin_1	SAMN25207504	Homo sapiens	145	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score

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Pathogenic genes

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