Document

Rank	Genome ID	Species	Strain	BioSample ID	Host	Allelic distance	ARGs	VFs	PGs	PPRS
1	GCA_015667555.1	Bifidobacterium bifidum	1001136B_160425_F1	SAMN15532708	Homo sapiens	0	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
2	GCA_009159555.1	Bifidobacterium bifidum	BIOML-A19	SAMN11944609	Homo sapiens	685	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
3	GCA_009160905.1	Bifidobacterium bifidum	BIOML-A12	SAMN11944602	Homo sapiens	685	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
4	GCA_009160945.1	Bifidobacterium bifidum	BIOML-A13	SAMN11944603	Homo sapiens	685	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
5	GCA_009078055.1	Bifidobacterium bifidum	BIOML-A11	SAMN11944601	Homo sapiens	686	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
6	GCA_009078115.1	Bifidobacterium bifidum	BIOML-A10	SAMN11944600	Homo sapiens	686	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
7	GCA_009159495.1	Bifidobacterium bifidum	BIOML-A24	SAMN11944614	Homo sapiens	686	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
8	GCA_009159505.1	Bifidobacterium bifidum	BIOML-A20	SAMN11944610	Homo sapiens	686	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
9	GCA_009160825.1	Bifidobacterium bifidum	BIOML-A25	SAMN11944615	Homo sapiens	686	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
10	GCA_009160885.1	Bifidobacterium bifidum	BIOML-A14	SAMN11944604	Homo sapiens	686	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
11	GCA_009160915.1	Bifidobacterium bifidum	BIOML-A15	SAMN11944605	Homo sapiens	686	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
12	GCA_009159095.1	Bifidobacterium bifidum	BIOML-A21	SAMN11944611	Homo sapiens	687	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
13	GCA_009160845.1	Bifidobacterium bifidum	BIOML-A17	SAMN11944607	Homo sapiens	694	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
14	GCA_001020325.1	Bifidobacterium bifidum	LMG 13200	SAMN03097405	Homo sapiens	704	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
15	GCA_009160775.1	Bifidobacterium bifidum	BIOML-A18	SAMN11944608	Homo sapiens	704	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
16	GCA_009160865.1	Bifidobacterium bifidum	BIOML-A16	SAMN11944606	Homo sapiens	706	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
17	GCA_000741085.1	Bifidobacterium bifidum	LMG 11041	SAMN02673426	Homo sapiens	708	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
18	GCA_016307165.1	Bifidobacterium bifidum	UBBB-55	SAMN16793263	Homo sapiens	708	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
19	GCA_017814645.1	Bifidobacterium bifidum	BB-G90	SAMN18436315	Homo sapiens	708	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
20	GCA_000466525.1	Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456	ATCC 29521	SAMN02436821	Homo sapiens	709	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
21	GCA_000771485.1	Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456	DSM 20456	SAMN02442030	-	709	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
22	GCA_001025135.1	Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456	JCM 1255	SAMD00061040	-	709	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
23	GCA_013867495.1	Bifidobacterium bifidum	s-1	SAMN15579835	-	709	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
24	GCA_900637095.1	Bifidobacterium bifidum	NCTC13001	SAMEA4063017	-	709	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
25	GCA_015551545.1	Bifidobacterium bifidum	D31t1_170403_D8	SAMN15532543	Homo sapiens	715	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
26	GCA_008681015.1	Bifidobacterium bifidum	LMAG:12	SAMN06546816	Homo sapiens	716	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
27	GCA_003466365.1	Bifidobacterium bifidum	TM06-5	SAMN09736996	Homo sapiens	718	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
28	GCA_003466395.1	Bifidobacterium bifidum	TM06-10	SAMN09736987	Homo sapiens	718	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
29	GCA_001020405.1	Bifidobacterium bifidum	IPLA 20015	SAMN03103719	Homo sapiens	721	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
30	GCA_003437945.1	Bifidobacterium bifidum	TF05-1	SAMN09736871	Homo sapiens	721	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
31	GCA_001576865.1	Bifidobacterium bifidum	141.5	SAMN04497897	Homo sapiens	724	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
32	GCA_002469385.1	Bifidobacterium bifidum	1 G1971	SAMN06759457	Homo sapiens	724	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
33	GCA_008679935.1	Bifidobacterium bifidum	LMAG:66	SAMN06546870	Homo sapiens	724	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
34	GCA_900112465.1	Bifidobacterium bifidum	Calf96	SAMN05216254	-	725	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
35	GCA_001546225.1	Bifidobacterium bifidum	MJR8628B	SAMN03842220	Homo sapiens	726	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
36	GCA_001405355.1	Bifidobacterium bifidum	2789STDY5608877	SAMEA3545285	Homo sapiens	727	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
37	GCA_003465425.1	Bifidobacterium bifidum	AF11-25B	SAMN09734209	Homo sapiens	728	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
38	GCA_001576895.1	Bifidobacterium bifidum	170.6	SAMN04497916	Homo sapiens	729	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
39	GCA_003472345.1	Bifidobacterium bifidum	AM12-10	SAMN09734784	Homo sapiens	729	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
40	GCA_003473145.1	Bifidobacterium bifidum	AM12-9	SAMN09734792	Homo sapiens	729	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
41	GCA_014871885.1	Bifidobacterium bifidum	COPD001	SAMN12904948	Homo sapiens	730	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
42	GCA_015549755.1	Bifidobacterium bifidum	D52t1_170925_G6	SAMN15532784	Homo sapiens	730	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
43	GCA_000265095.1	Bifidobacterium bifidum BGN4	BGN4	SAMN02603486	Homo sapiens	731	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
44	GCA_002076105.1	Bifidobacterium bifidum	1887B	SAMN06621707	Homo sapiens	731	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
45	GCA_015555005.1	Bifidobacterium bifidum	BSD2780061688b_171218_F12	SAMN15532763	Homo sapiens	733	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
46	GCA_016838705.1	Bifidobacterium bifidum	HN002	SAMN17735950	Homo sapiens	733	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
47	GCA_003436635.1	Bifidobacterium bifidum	TM02-17	SAMN09736965	Homo sapiens	734	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
48	GCA_003436655.1	Bifidobacterium bifidum	TM02-15	SAMN09736964	Homo sapiens	734	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
49	GCA_003573955.1	Bifidobacterium bifidum LMG 13195	JCM 7004	SAMD00078038	Homo sapiens	735	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
50	GCA_005844205.1	Bifidobacterium bifidum	BSD2780061688st1_G1	SAMN10863272	Homo sapiens	735	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
51	GCA_018375785.1	Bifidobacterium bifidum	L2_040_365G1_dasL2_040_365G1_maxbin2.maxbin.008	SAMN17801390	Homo sapiens	735	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
52	GCA_000155395.1	Bifidobacterium bifidum NCIMB 41171	NCIMB 41171	SAMN02463676	Homo sapiens	736	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
53	GCA_000273525.1	Bifidobacterium bifidum NCIMB 41171	NCIMB 41171	SAMN02463676	Homo sapiens	736	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
54	GCA_001281345.1	Bifidobacterium bifidum	BF3	SAMN03271680	Homo sapiens	736	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
55	GCA_022133625.1	Bifidobacterium bifidum	DFI.7.59	SAMN24726072	Homo sapiens	736	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
56	GCA_022134905.1	Bifidobacterium bifidum	DFI.7.51	SAMN24726067	Homo sapiens	736	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
57	GCA_000300215.1	Bifidobacterium bifidum IPLA 20015	IPLA 20015	SAMN02470078	Homo sapiens	737	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
58	GCA_001020355.1	Bifidobacterium bifidum	85B	SAMN03097398	Homo sapiens	738	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
59	GCA_015549425.1	Bifidobacterium bifidum	BSD2780061687_150420_D1	SAMN15532514	Homo sapiens	738	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
60	GCA_009077975.1	Bifidobacterium bifidum	BIOML-A6	SAMN11944596	Homo sapiens	740	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
61	GCA_009075765.1	Bifidobacterium bifidum	BIOML-A2	SAMN11944592	Homo sapiens	741	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
62	GCA_009075785.1	Bifidobacterium bifidum	BIOML-A1	SAMN11944591	Homo sapiens	741	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
63	GCA_009077955.1	Bifidobacterium bifidum	BIOML-A7	SAMN11944597	Homo sapiens	741	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
64	GCA_009078005.1	Bifidobacterium bifidum	BIOML-A5	SAMN11944595	Homo sapiens	741	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
65	GCA_009078015.1	Bifidobacterium bifidum	BIOML-A4	SAMN11944594	Homo sapiens	741	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
66	GCA_015549125.1	Bifidobacterium bifidum	1001283B150225_161107_H11	SAMN15532824	Homo sapiens	741	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
67	GCA_017894325.1	Bifidobacterium bifidum	CNCM I-4319	SAMN15324980	Homo sapiens	741	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
68	GCA_001685685.1	Bifidobacterium bifidum	BI-14	SAMD00047595	Homo sapiens	742	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
69	GCA_004167365.1	Bifidobacterium bifidum	ca_0067	SAMN10239585	Homo sapiens	742	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
70	GCA_009077915.1	Bifidobacterium bifidum	BIOML-A8	SAMN11944598	Homo sapiens	742	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
71	GCA_009078065.1	Bifidobacterium bifidum	BIOML-A3	SAMN11944593	Homo sapiens	742	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
72	GCA_009078095.1	Bifidobacterium bifidum	BIOML-A9	SAMN11944599	Homo sapiens	742	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
73	GCA_008679685.1	Bifidobacterium bifidum	LMAG:79	SAMN06546883	Homo sapiens	744	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
74	GCA_011029205.1	Bifidobacterium bifidum	VA07-1AN	SAMN14087237	Homo sapiens	744	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
75	GCA_001020255.1	Bifidobacterium bifidum	156B	SAMN03097399	Homo sapiens	747	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
76	GCA_001020265.1	Bifidobacterium bifidum	IPLA 20017	SAMN03097402	Homo sapiens	749	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
77	GCA_000165905.1	Bifidobacterium bifidum PRL2010	PRL2010	SAMN02603510	Homo sapiens	750	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
78	GCA_001020375.1	Bifidobacterium bifidum	324B	SAMN03097400	Homo sapiens	750	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
79	GCA_003436135.1	Bifidobacterium bifidum	TM07-4AC	SAMN09737006	Homo sapiens	750	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
80	GCA_003468415.1	Bifidobacterium bifidum	AM36-1AC	SAMN09736479	Homo sapiens	750	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
81	GCA_000164965.1	Bifidobacterium bifidum S17	S17	SAMN02603395	-	751	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
82	GCA_905205325.1	Bifidobacterium bifidum	ERR1430412-bin.32	SAMEA7846618	-	755	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
83	GCA_003437345.1	Bifidobacterium bifidum	TF06-13	SAMN09736889	Homo sapiens	756	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
84	GCA_003437785.1	Bifidobacterium bifidum	TF05-39	SAMN09736884	Homo sapiens	756	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
85	GCA_003466485.1	Bifidobacterium bifidum	TM05-15	SAMN09736979	Homo sapiens	756	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
86	GCA_020892075.1	Bifidobacterium bifidum	YIT 10347	SAMD00324644	-	756	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
87	GCA_003437175.1	Bifidobacterium bifidum	TF07-22	SAMN09736904	Homo sapiens	757	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
88	GCA_003437325.1	Bifidobacterium bifidum	TF06-14AC	SAMN09736890	Homo sapiens	757	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
89	GCA_003467985.1	Bifidobacterium bifidum	AM42-15AC	SAMN09736543	Homo sapiens	758	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
90	GCA_003436575.1	Bifidobacterium bifidum	TM04-12	SAMN09736968	Homo sapiens	759	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
91	GCA_003474045.1	Bifidobacterium bifidum	AF45-10	SAMN09734712	Homo sapiens	759	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
92	GCA_005844365.1	Bifidobacterium bifidum	1001271st1_H11	SAMN10863260	Homo sapiens	761	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
93	GCA_008669135.1	Bifidobacterium bifidum	S08A.meta.bin_5	SAMN10316648	Homo sapiens	762	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
94	GCA_015667195.1	Bifidobacterium bifidum	1001271B_151109_F2	SAMN15533074	Homo sapiens	762	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
95	GCA_008670815.1	Bifidobacterium bifidum	S08C.meta.bin_9	SAMN10316672	Homo sapiens	763	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
96	GCA_014849155.1	Bifidobacterium bifidum	UBG194	SAMN09684575	Homo sapiens	763	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
97	GCA_003390735.1	Bifidobacterium bifidum	S6	SAMN07484235	Homo sapiens	764	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
98	GCA_902386775.1	Bifidobacterium bifidum	MGYG-HGUT-02396	SAMEA5851900	-	764	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
99	GCA_019734315.1	Bifidobacterium bifidum	K05	SAMN14389522	Homo sapiens	771	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
100	GCA_003470585.1	Bifidobacterium bifidum	AM18-29	SAMN09734868	Homo sapiens	773	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score

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