Document

Rank	Genome ID	Species	Strain	BioSample ID	Host	Allelic distance	ARGs	VFs	PGs	PPRS
1	GCA_017599225.1	Lactobacillus crispatus	Lc-G22	SAMN18395719	-	0	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
2	GCA_000177575.1	Lactobacillus crispatus 214-1	214-1	SAMN00003361	Homo sapiens	14	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
3	GCA_000162255.1	Lactobacillus crispatus 125-2-CHN	125-2-CHN	SAMN02463740	Homo sapiens	54	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
4	GCA_022456935.1	Lactobacillus crispatus	CM2261_MRS3_S774-bin_1	SAMN25207645	Homo sapiens	57	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
5	GCA_022455065.1	Lactobacillus crispatus	CM_F04_S798-bin_1	SAMN25207434	Homo sapiens	58	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
6	GCA_022455915.1	Lactobacillus crispatus	JKR_P1_14_F02_S686_001-bin_1	SAMN25207619	Homo sapiens	58	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
7	GCA_022455935.1	Lactobacillus crispatus	JKR_P1_08_H01_S680_001-bin_1	SAMN25207616	Homo sapiens	58	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
8	GCA_022455955.1	Lactobacillus crispatus	JKR_P1_07_G01_S679_001-bin_1	SAMN25207615	Homo sapiens	58	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
9	GCA_022455875.1	Lactobacillus crispatus	JKR_P1_11_C02_S683_001-bin_1	SAMN25207618	Homo sapiens	59	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
10	GCA_022455895.1	Lactobacillus crispatus	JKR_P1_15_G02_S687_001-bin_1	SAMN25207620	Homo sapiens	59	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
11	GCA_022456015.1	Lactobacillus crispatus	JKR_P1_05_E01_S677_001-bin_1	SAMN25207613	Homo sapiens	59	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
12	GCA_022456175.1	Lactobacillus crispatus	F4_1630_1235_1_MRS7_S268-bin_1-SPLIT	SAMN25207604	Homo sapiens	59	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
13	GCA_022456755.1	Lactobacillus crispatus	0421_295_1_2_MRS5_S431-bin_1	SAMN25207538	Homo sapiens	59	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
14	GCA_022456775.1	Lactobacillus crispatus	0421_295_1_1_MRS7_S415-bin_1	SAMN25207533	Homo sapiens	59	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
15	GCA_022456795.1	Lactobacillus crispatus	0421_295_1_1_MRS2_S399-bin_1	SAMN25207528	Homo sapiens	59	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
16	GCA_022456835.1	Lactobacillus crispatus	0421_295_1_1_MRS6_S407-bin_1	SAMN25207532	Homo sapiens	59	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
17	GCA_022456875.1	Lactobacillus crispatus	0421_295_1_1_MRS11_S423-bin_1	SAMN25207526	Homo sapiens	59	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
18	GCA_022456895.1	Lactobacillus crispatus	0421_295_1_1_MRS10_S843-bin_1	SAMN25207525	Homo sapiens	59	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
19	GCA_022455855.1	Lactobacillus crispatus	JKR_P1_09_A02_S681_001-bin_1	SAMN25207617	Homo sapiens	60	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
20	GCA_022456035.1	Lactobacillus crispatus	JKR_P1_01_A01_S673_001-bin_1	SAMN25207611	Homo sapiens	60	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
21	GCA_022456735.1	Lactobacillus crispatus	0421_295_1_2_MRS8_S452-bin_1	SAMN25207541	Homo sapiens	60	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
22	GCA_022456805.1	Lactobacillus crispatus	0421_295_1_1_MRS5_S819-bin_2	SAMN25207531	Homo sapiens	60	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
23	GCA_022456855.1	Lactobacillus crispatus	0421_295_1_1_MRS4_S811-bin_1	SAMN25207530	Homo sapiens	60	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
24	GCA_022457545.1	Lactobacillus crispatus	0421_295_1_2_MRS6_S438-bin_1	SAMN25207539	Homo sapiens	60	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
25	GCA_022456215.1	Lactobacillus crispatus	F4_1630_1235_1_CBA14_S224-bin_1-SPLIT	SAMN25207599	Homo sapiens	61	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
26	GCA_022457425.1	Lactobacillus crispatus	0421_295_1_1_MRS3_S803-bin_2	SAMN25207529	Homo sapiens	63	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
27	GCA_022457405.1	Lactobacillus crispatus	0421_295_1_1_MRS12_S851-bin_1	SAMN25207527	Homo sapiens	64	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
28	GCA_022457495.1	Lactobacillus crispatus	0421_295_1_2_MRS2_S772-bin_1	SAMN25207536	Homo sapiens	64	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
29	GCA_002863485.1	Lactobacillus crispatus	UMB0054	SAMN08193693	Homo sapiens	65	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
30	GCA_022455975.1	Lactobacillus crispatus	JKR_P1_06_F01_S678_001-bin_1	SAMN25207614	Homo sapiens	69	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
31	GCA_020224235.1	Lactobacillus crispatus	M247	SAMN19792047	Homo sapiens	70	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
32	GCA_022455985.1	Lactobacillus crispatus	JKR_P1_03_C01_S675_001-bin_1	SAMN25207612	Homo sapiens	71	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
33	GCA_022456695.1	Lactobacillus crispatus	0421_295_1_2_MRS7_S445-bin_1	SAMN25207540	Homo sapiens	71	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
34	GCA_003795065.1	Lactobacillus crispatus	CO3MRSI1	SAMN10343598	Homo sapiens	72	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
35	GCA_022457525.1	Lactobacillus crispatus	0421_295_1_2_MRS9_S796-bin_1	SAMN25207542	Homo sapiens	73	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
36	GCA_000176975.2	Lactobacillus crispatus SJ-3C-US	SJ-3C-US	SAMN02463837	Homo sapiens	74	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
37	GCA_001541505.1	Lactobacillus crispatus	VMC6	SAMN03893604	Homo sapiens	74	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
38	GCA_001541535.1	Lactobacillus crispatus	VMC7	SAMN03893605	Homo sapiens	74	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
39	GCA_021278945.1	Lactobacillus crispatus	lc31	SAMN15862579	Homo sapiens	75	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
40	GCA_022455055.1	Lactobacillus crispatus	CM_F06_S814-bin_1	SAMN25207436	Homo sapiens	75	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
41	GCA_022457475.1	Lactobacillus crispatus	0421_295_1_2_MRS10_S804-bin_2	SAMN25207535	Homo sapiens	75	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
42	GCA_001541515.1	Lactobacillus crispatus	VMC5	SAMN03893603	Homo sapiens	76	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
43	GCA_002861765.1	Lactobacillus crispatus	UMB0803	SAMN08193687	Homo sapiens	76	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
44	GCA_003971565.1	Lactobacillus crispatus	AB70	SAMN08409124	Homo sapiens	76	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
45	GCA_004361075.1	Lactobacillus crispatus	RL32	SAMN07213212	Homo sapiens	76	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
46	GCA_004361095.1	Lactobacillus crispatus	RL31	SAMN07213211	Homo sapiens	76	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
47	GCA_016162185.1	Lactobacillus crispatus	LB57	SAMN15357363	Homo sapiens	76	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
48	GCA_022454395.1	Lactobacillus crispatus	DZD_CM_24_S792-bin_1	SAMN25207479	Homo sapiens	76	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
49	GCA_000466885.3	Lactobacillus crispatus 2029	2029	SAMN02298797	Homo sapiens	77	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
50	GCA_004361515.1	Lactobacillus crispatus	RL20	SAMN07213200	Homo sapiens	77	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
51	GCA_016093195.1	Lactobacillus crispatus	C0176A1	SAMN17001304	Homo sapiens	77	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
52	GCA_022454275.1	Lactobacillus crispatus	DZD_CM_30_S798-bin_2	SAMN25207484	Homo sapiens	77	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
53	GCA_022454285.1	Lactobacillus crispatus	DZD_CM_32_S800-bin_1	SAMN25207486	Homo sapiens	77	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
54	GCA_022454315.1	Lactobacillus crispatus	DZD_CM_31_S799-bin_2	SAMN25207485	Homo sapiens	77	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
55	GCA_022454335.1	Lactobacillus crispatus	DZD_CM_26_S794-bin_2	SAMN25207481	Homo sapiens	77	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
56	GCA_022454355.1	Lactobacillus crispatus	DZD_CM_27_S795-bin_1	SAMN25207482	Homo sapiens	77	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
57	GCA_022454435.1	Lactobacillus crispatus	DZD_CM_21_S789-bin_1	SAMN25207476	Homo sapiens	77	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
58	GCA_022454475.1	Lactobacillus crispatus	DZD_CM_16_S784-bin_1	SAMN25207472	Homo sapiens	77	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
59	GCA_022454535.1	Lactobacillus crispatus	DZD_CM_15_S783-bin_1	SAMN25207471	Homo sapiens	77	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
60	GCA_022454565.1	Lactobacillus crispatus	DZD_CM_13_S781-bin_1	SAMN25207469	Homo sapiens	77	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
61	GCA_022454655.1	Lactobacillus crispatus	DZD_CM_10_S778-bin_2	SAMN25207466	Homo sapiens	77	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
62	GCA_022454915.1	Lactobacillus crispatus	CM_G10_S847-bin_1	SAMN25207448	Homo sapiens	77	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
63	GCA_022454965.1	Lactobacillus crispatus	CM_F10_S846-bin_1	SAMN25207440	Homo sapiens	77	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
64	GCA_022455005.1	Lactobacillus crispatus	CM_F09_S838-bin_1	SAMN25207439	Homo sapiens	77	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
65	GCA_022455255.1	Lactobacillus crispatus	CM_D08_S828-bin_2	SAMN25207422	Homo sapiens	77	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
66	GCA_022455295.1	Lactobacillus crispatus	CM_D09_S836-bin_1	SAMN25207423	Homo sapiens	77	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
67	GCA_022455555.1	Lactobacillus crispatus	CM_B07_S818-bin_1	SAMN25207406	Homo sapiens	77	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
68	GCA_022455675.1	Lactobacillus crispatus	CM_A08_S825-bin_2	SAMN25207401	Homo sapiens	77	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
69	GCA_016162145.1	Lactobacillus crispatus	LB58	SAMN15357364	Homo sapiens	78	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
70	GCA_022454135.1	Lactobacillus crispatus	Mitchell_12_29_17_B05_S610-bin_1	SAMN25207493	Homo sapiens	78	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
71	GCA_022454375.1	Lactobacillus crispatus	DZD_CM_22_S790-bin_1	SAMN25207477	Homo sapiens	78	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
72	GCA_022454385.1	Lactobacillus crispatus	DZD_CM_23_S791-bin_1	SAMN25207478	Homo sapiens	78	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
73	GCA_022454495.1	Lactobacillus crispatus	DZD_CM_19_S787-bin_1	SAMN25207474	Homo sapiens	78	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
74	GCA_022454515.1	Lactobacillus crispatus	DZD_CM_17_S785-bin_1	SAMN25207473	Homo sapiens	78	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
75	GCA_022454555.1	Lactobacillus crispatus	DZD_CM_11_S779-bin_1	SAMN25207467	Homo sapiens	78	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
76	GCA_022454765.1	Lactobacillus crispatus	CM_H09_S840-bin_1	SAMN25207457	Homo sapiens	78	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
77	GCA_022455515.1	Lactobacillus crispatus	CM_B09_S834-bin_1	SAMN25207407	Homo sapiens	78	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
78	GCA_000301135.1	Lactobacillus crispatus FB077-07	FB077-07	SAMN02463885	Homo sapiens	79	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
79	GCA_002861775.1	Lactobacillus crispatus	UMB0044	SAMN08193688	Homo sapiens	79	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
80	GCA_004361115.1	Lactobacillus crispatus	RL29	SAMN07213209	Homo sapiens	79	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
81	GCA_004361175.1	Lactobacillus crispatus	RL26	SAMN07213206	Homo sapiens	79	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
82	GCA_004361205.1	Lactobacillus crispatus	RL19	SAMN07213199	Homo sapiens	79	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
83	GCA_004361395.1	Lactobacillus crispatus	RL33	SAMN07213213	Homo sapiens	79	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
84	GCA_015708055.1	Lactobacillus crispatus	CRI17	SAMN14773342	Homo sapiens	79	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
85	GCA_015708065.1	Lactobacillus crispatus	CRI10	SAMN14772552	Homo sapiens	79	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
86	GCA_015708075.1	Lactobacillus crispatus	CRI8	SAMN14771635	Homo sapiens	79	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
87	GCA_022453955.1	Lactobacillus crispatus	Mitchell_12_29_17_H06_S624-bin_1	SAMN25207504	Homo sapiens	79	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
88	GCA_022454205.1	Lactobacillus crispatus	Mitchell_12_29_17_A05_S609-bin_1	SAMN25207491	Homo sapiens	79	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
89	GCA_022455155.1	Lactobacillus crispatus	CM_E08_S829-bin_1	SAMN25207430	Homo sapiens	79	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
90	GCA_022455185.1	Lactobacillus crispatus	CM_E09_S837-bin_2	SAMN25207431	Homo sapiens	79	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
91	GCA_022455755.1	Lactobacillus crispatus	CM_A01_S769-bin_1	SAMN25207395	Homo sapiens	79	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
92	GCA_001546015.1	Lactobacillus crispatus	VMC1	SAMN03893599	Homo sapiens	80	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
93	GCA_004361185.1	Lactobacillus crispatus	RL24	SAMN07213204	Homo sapiens	80	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
94	GCA_004361265.1	Lactobacillus crispatus	RL13	SAMN07213194	Homo sapiens	80	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
95	GCA_004361295.1	Lactobacillus crispatus	RL11	SAMN07213193	Homo sapiens	80	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
96	GCA_004361555.1	Lactobacillus crispatus	RL14	SAMN07213195	Homo sapiens	80	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
97	GCA_009730275.1	Lactobacillus crispatus	FDAARGOS_743	SAMN11056458	Homo sapiens	80	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
98	GCA_016162155.1	Lactobacillus crispatus	LB61	SAMN15357366	Homo sapiens	80	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
99	GCA_018885325.1	Lactobacillus crispatus	PMC201	SAMN19601668	-	80	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
100	GCA_019277925.1	Lactobacillus crispatus	10.2	SAMN18809436	Homo sapiens	80	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score

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Pathogenic genes

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Antimicrobial resistance genes

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