Rank Genome ID Species Strain BioSample ID Host Allelic distance ARGs VFs PGs PPRS
1GCA_018368015.1Lacticaseibacillus rhamnosusL3_079_062G2_dasL3_079_062G2_metabat.metabat.2SAMN17800779Homo sapiens0
2GCA_000026505.1Lacticaseibacillus rhamnosus GGGG (ATCC 53103)SAMEA2272375-22
3GCA_002025085.1Lacticaseibacillus rhamnosusWQ2SAMN06479972-22
4GCA_003052965.1Lacticaseibacillus rhamnosusDS4_11SAMN05864074Homo sapiens22
5GCA_004125455.1Lacticaseibacillus rhamnosusLR-CVCSAMN08176629Homo sapiens22
6GCA_004125475.1Lacticaseibacillus rhamnosusLR-SSAMN08176640Homo sapiens22
7GCA_902381635.1Lacticaseibacillus rhamnosusMGYG-HGUT-01293SAMEA5850796-22
8GCA_000011045.1Lacticaseibacillus rhamnosus GGATCC 53103SAMD00060969-23
9GCA_000712515.1Lacticaseibacillus rhamnosus PEL6PEL6SAMN02602921-23
10GCA_001981725.1Lacticaseibacillus rhamnosusRI-004SAMN05717709-23
11GCA_002103215.1Lacticaseibacillus rhamnosusLrh46SAMN03766748Homo sapiens23
12GCA_003353455.1Lacticaseibacillus rhamnosus GGGGSAMN09685158Homo sapiens23
13GCA_004010975.1Lacticaseibacillus rhamnosusLR-B1SAMN08176627Homo sapiens23
14GCA_004125395.1Lacticaseibacillus rhamnosusLR-B2SAMN08176628Homo sapiens23
15GCA_009679345.1Lacticaseibacillus rhamnosusBIOML-A5SAMN11946122Homo sapiens23
16GCA_901830405.1Lacticaseibacillus rhamnosusAMBR1SAMEA5665498-23
17GCA_002158925.1Lacticaseibacillus rhamnosus4B15SAMN07160384-24
18GCA_008831425.1Lacticaseibacillus rhamnosusBIO6870SAMN12856534Homo sapiens24
19GCA_015238575.1Lacticaseibacillus rhamnosus GGJL-1SAMN13386394Homo sapiens24
20GCA_017795605.1Lacticaseibacillus rhamnosusLDTM7511SAMN14558312Homo sapiens24
21GCA_001657055.1Lacticaseibacillus rhamnosusLrh18SAMN03196638Homo sapiens25
22GCA_901830355.1Lacticaseibacillus rhamnosusAMBR6SAMEA5665502-25
23GCA_901830425.1Lacticaseibacillus rhamnosusAMBR5SAMEA5665501-25
24GCA_001656545.1Lacticaseibacillus rhamnosusLrh32SAMN03196642Homo sapiens26
25GCA_001657075.1Lacticaseibacillus rhamnosusLrh17SAMN03196627Homo sapiens26
26GCA_000712505.1Lacticaseibacillus rhamnosus PEL5PEL5SAMN02602920-27
27GCA_001044415.1Lacticaseibacillus rhamnosus313SAMN03766175Homo sapiens27
28GCA_001657115.1Lacticaseibacillus rhamnosusLrh14SAMN03196644Homo sapiens28
29GCA_001656535.1Lacticaseibacillus rhamnosusLrh8SAMN03196640Homo sapiens29
30GCA_001656815.1Lacticaseibacillus rhamnosusLrh7SAMN03196646Homo sapiens30
31GCA_001657085.1Lacticaseibacillus rhamnosusLrh16SAMN03196622-32
32GCA_001756565.1Lacticaseibacillus rhamnosusHCT70SAMN05257120-32
33GCA_001656785.1Lacticaseibacillus rhamnosusLrh9SAMN03196641Homo sapiens33
34GCA_002103145.1Lacticaseibacillus rhamnosusLrh39SAMN03769471Homo sapiens44
35GCA_901830365.1Lacticaseibacillus rhamnosusAMBR7SAMEA5665503-47
36GCA_002103155.1Lacticaseibacillus rhamnosusLrh38SAMN03769470Homo sapiens50
37GCA_004125465.1Lacticaseibacillus rhamnosusLR-GG-MoProbiSAMN08176639Homo sapiens51
38GCA_001721925.1Lacticaseibacillus rhamnosusLRBSAMN05513711Homo sapiens57
39GCA_001657025.1Lacticaseibacillus rhamnosusLrh2SAMN03196626Homo sapiens64
40GCA_001656755.1Lacticaseibacillus rhamnosusLrh1SAMN03196625Homo sapiens94
41GCA_001044015.1Lacticaseibacillus rhamnosusLr071SAMN03196657Homo sapiens128
42GCA_001657245.1Lacticaseibacillus rhamnosusLrh45SAMN03196664-199
43GCA_008727835.1Lacticaseibacillus rhamnosushsryfm 1301SAMN12793868Homo sapiens389
44GCA_002287945.1Lacticaseibacillus rhamnosus DSM 14870DSM 14870SAMN07605138-437
45GCA_015377485.1Lacticaseibacillus rhamnosusTK-F8BSAMN13106275-439
46GCA_000712495.1Lacticaseibacillus rhamnosus E800E800SAMN02602919-441
47GCA_001657135.1Lacticaseibacillus rhamnosusLrh13SAMN03196647Homo sapiens441
48GCA_001062885.1Lacticaseibacillus rhamnosus186_LRHASAMN03197377Homo sapiens442
49GCA_001656925.1Lacticaseibacillus rhamnosusLrh28SAMN03196643Homo sapiens444
50GCA_000173255.2Lacticaseibacillus rhamnosus HN001HN001SAMN02469790-447
51GCA_002406715.1Lacticaseibacillus rhamnosusP5SAMN07665579-447
52GCA_002406785.1Lacticaseibacillus rhamnosusP3SAMN07665577-447
53GCA_002406795.1Lacticaseibacillus rhamnosusP1SAMN07665575-447
54GCA_015668455.1Lacticaseibacillus rhamnosus1001270B_150601_F12SAMN15533264Homo sapiens447
55GCA_018449495.1Lacticaseibacillus rhamnosusLr-G14SAMN18897175-447
56GCA_001062955.1Lacticaseibacillus rhamnosus214_LRHASAMN03197407Homo sapiens448
57GCA_002406745.1Lacticaseibacillus rhamnosusP4SAMN07665578-448
58GCA_001991035.1Lacticaseibacillus rhamnosusL156.4SAMN06233883Mus musculus449
59GCA_001656835.1Lacticaseibacillus rhamnosusLrh6SAMN03196635Homo sapiens450
60GCA_001064785.1Lacticaseibacillus rhamnosus390_LRHASAMN03197581Homo sapiens454
61GCA_001068015.1Lacticaseibacillus rhamnosus979_LRHASAMN03198199Homo sapiens454
62GCA_001656875.1Lacticaseibacillus rhamnosusLrh4SAMN03196634Homo sapiens458
63GCA_009429065.1Lacticaseibacillus rhamnosusIDCC 3201SAMN13091356Infant465
64GCA_001988935.1Lacticaseibacillus rhamnosusBFE5264SAMN04404358-471
65GCA_001656915.1Lacticaseibacillus rhamnosusLrh3SAMN03196636-481
66GCA_021300595.1Lacticaseibacillus rhamnosusICIS-627SAMN24291469Homo sapiens484
67GCA_001063295.1Lacticaseibacillus rhamnosus389_LRHASAMN03197580Homo sapiens493
68GCA_000743075.1Lacticaseibacillus rhamnosus24SAMN02983263Homo sapiens496
69GCA_015557825.1Lacticaseibacillus rhamnosus1001216B_150713_B1SAMN15533109Homo sapiens516
70GCA_014155845.1Lacticaseibacillus rhamnosusDPC 7102SAMN12280510-588
71GCA_005864245.1Lacticaseibacillus rhamnosusFAM 20558SAMN11653945-621
72GCA_001656945.1Lacticaseibacillus rhamnosusLrh27SAMN03196624Homo sapiens622
73GCA_001656585.1Lacticaseibacillus rhamnosusLrh29SAMN03196632Homo sapiens630
74GCA_905371895.1Lacticaseibacillus rhamnosus 2166SRR9217392-mag-bin.13SAMEA8395116-639
75GCA_004122925.1Lacticaseibacillus rhamnosus5-1SAMN10790217-648
76GCA_016887825.1Lacticaseibacillus rhamnosus1473SAMN17562093-649
77GCA_001068215.1Lacticaseibacillus rhamnosus944_LRHASAMN03198164Homo sapiens655
78GCA_001005625.1Lacticaseibacillus rhamnosusCNCM-I-3698SAMN03465328Capra hircus659
79GCA_000735255.1Lacticaseibacillus rhamnosus K32K32SAMN02840977Homo sapiens662
80GCA_905194935.1Lacticaseibacillus rhamnosusERR1430462-bin.4SAMEA7846680-664
81GCA_018286375.1Lacticaseibacillus rhamnosusASSAMN18869154-665
82GCA_000699985.1Lacticaseibacillus rhamnosus 51B51BSAMN02776192Homo sapiens666
83GCA_000801045.1Lacticaseibacillus rhamnosus116SAMN03154065Homo sapiens666
84GCA_001656765.1Lacticaseibacillus rhamnosusLrh34SAMN03196621-666
85GCA_002762445.1Lacticaseibacillus rhamnosusGR-1SAMN07981099-666
86GCA_003046115.1Lacticaseibacillus rhamnosusLR2SAMN08801722-666
87GCA_003061565.1Lacticaseibacillus rhamnosusDS17_11SAMN06464110Homo sapiens666
88GCA_003061605.1Lacticaseibacillus rhamnosusDS22_11SAMN06464112Homo sapiens666
89GCA_006151905.1Lacticaseibacillus rhamnosus1.032SAMN11896630-666
90GCA_019990845.1Lacticaseibacillus rhamnosuscek-R1SAMN21367937beet666
91GCA_900604925.1Lacticaseibacillus rhamnosusLactobacillus rhamnosus GR-1SAMEA4984995-666
92GCA_901830385.1Lacticaseibacillus rhamnosusAMBR3SAMEA5665499-666
93GCA_901830395.1Lacticaseibacillus rhamnosusAMBR4SAMEA5665500-666
94GCA_000814485.1Lacticaseibacillus rhamnosus308SAMN03154069Homo sapiens667
95GCA_001067885.1Lacticaseibacillus rhamnosus906_LRHASAMN03198113Homo sapiens667
96GCA_001657195.1Lacticaseibacillus rhamnosusLrh33SAMN03196620-667
97GCA_008017355.1Lacticaseibacillus rhamnosusVaheSAMN12558187Homo sapiens667
98GCA_013425725.1Lacticaseibacillus rhamnosusAMC0712SAMN15514048Homo sapiens667
99GCA_015549085.1Lacticaseibacillus rhamnosus1001311H_170123_H11SAMN15532621Homo sapiens667
100GCA_018141205.1Lacticaseibacillus rhamnosusCE1SAMN18687446-667