Document

Rank	Genome ID	Species	Strain	BioSample ID	Host	Allelic distance	ARGs	VFs	PGs	PPRS
1	GCA_019041375.1	Bifidobacterium bifidum	MSK.8.3	SAMN19732216	Homo sapiens	0	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
2	GCA_019041835.1	Bifidobacterium bifidum	MSK.8.16	SAMN19732209	Homo sapiens	3	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
3	GCA_014849155.1	Bifidobacterium bifidum	UBG194	SAMN09684575	Homo sapiens	779	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
4	GCA_001595435.1	Bifidobacterium bifidum	791	SAMN04155634	Homo sapiens	815	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
5	GCA_002114145.1	Bifidobacterium bifidum	ICIS-310	SAMN05858649	Homo sapiens	815	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
6	GCA_004799295.1	Bifidobacterium bifidum	ICIS-202	SAMN07709009	Homo sapiens	815	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
7	GCA_020710245.1	Bifidobacterium bifidum	ICIS-629	SAMN22555201	Homo sapiens	815	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
8	GCA_020861855.1	Bifidobacterium bifidum	ICIS-176	SAMN22746553	Homo sapiens	815	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
9	GCA_022014355.1	Bifidobacterium bifidum	791	SAMN06611220	Homo sapiens	815	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
10	GCA_003094715.1	Bifidobacterium bifidum	DS32_23	SAMN08949005	Homo sapiens	816	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
11	GCA_003790385.1	Bifidobacterium bifidum	ICIS-643	SAMN06606988	Homo sapiens	816	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
12	GCA_016070035.1	Bifidobacterium bifidum	VKPM Ac-1784	SAMN15880062	Homo sapiens	816	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
13	GCA_014848835.1	Bifidobacterium bifidum	UBG013	SAMN09684599	Homo sapiens	818	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
14	GCA_900445665.1	Bifidobacterium bifidum	NCTC10471	SAMEA104016180	-	818	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
15	GCA_003436635.1	Bifidobacterium bifidum	TM02-17	SAMN09736965	Homo sapiens	819	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
16	GCA_003436655.1	Bifidobacterium bifidum	TM02-15	SAMN09736964	Homo sapiens	819	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
17	GCA_003437175.1	Bifidobacterium bifidum	TF07-22	SAMN09736904	Homo sapiens	819	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
18	GCA_001020335.1	Bifidobacterium bifidum	LMG 11583	SAMN03097404	Homo sapiens	820	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
19	GCA_008868415.1	Bifidobacterium bifidum	BIO5480	SAMN12856545	Homo sapiens	820	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
20	GCA_000300215.1	Bifidobacterium bifidum IPLA 20015	IPLA 20015	SAMN02470078	Homo sapiens	821	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
21	GCA_008681015.1	Bifidobacterium bifidum	LMAG:12	SAMN06546816	Homo sapiens	823	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
22	GCA_000164965.1	Bifidobacterium bifidum S17	S17	SAMN02603395	-	824	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
23	GCA_001020275.1	Bifidobacterium bifidum	LMG 11582	SAMN03097403	Homo sapiens	824	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
24	GCA_001281345.1	Bifidobacterium bifidum	BF3	SAMN03271680	Homo sapiens	824	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
25	GCA_003094645.1	Bifidobacterium bifidum	DS33_23	SAMN08949006	Homo sapiens	824	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
26	GCA_003094735.1	Bifidobacterium bifidum	DS31_23	SAMN08949004	Homo sapiens	824	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
27	GCA_003094755.1	Bifidobacterium bifidum	DS30_23	SAMN08949003	Homo sapiens	824	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
28	GCA_003094795.1	Bifidobacterium bifidum	DS25_23	SAMN08949001	Homo sapiens	824	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
29	GCA_003095035.1	Bifidobacterium bifidum	DS26_23	SAMN08949002	Homo sapiens	824	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
30	GCA_003437945.1	Bifidobacterium bifidum	TF05-1	SAMN09736871	Homo sapiens	824	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
31	GCA_003465425.1	Bifidobacterium bifidum	AF11-25B	SAMN09734209	Homo sapiens	824	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
32	GCA_003466365.1	Bifidobacterium bifidum	TM06-5	SAMN09736996	Homo sapiens	824	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
33	GCA_003466395.1	Bifidobacterium bifidum	TM06-10	SAMN09736987	Homo sapiens	824	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
34	GCA_003470585.1	Bifidobacterium bifidum	AM18-29	SAMN09734868	Homo sapiens	824	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
35	GCA_003470615.1	Bifidobacterium bifidum	AM18-12AC	SAMN09734861	Homo sapiens	824	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
36	GCA_003471555.1	Bifidobacterium bifidum	AM18-11	SAMN09734860	Homo sapiens	824	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
37	GCA_003471595.1	Bifidobacterium bifidum	AM18-1	SAMN09734857	Homo sapiens	824	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
38	GCA_003573895.1	Bifidobacterium bifidum	TMC 3115	SAMD00078313	Homo sapiens	824	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
39	GCA_008679935.1	Bifidobacterium bifidum	LMAG:66	SAMN06546870	Homo sapiens	824	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
40	GCA_015667195.1	Bifidobacterium bifidum	1001271B_151109_F2	SAMN15533074	Homo sapiens	824	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
41	GCA_020908005.1	Bifidobacterium bifidum	ICIS-504	SAMN22746550	Homo sapiens	824	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
42	GCA_022133625.1	Bifidobacterium bifidum	DFI.7.59	SAMN24726072	Homo sapiens	824	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
43	GCA_022134905.1	Bifidobacterium bifidum	DFI.7.51	SAMN24726067	Homo sapiens	824	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
44	GCA_001020245.1	Bifidobacterium bifidum	A8	SAMN03097401	Homo sapiens	825	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
45	GCA_001020405.1	Bifidobacterium bifidum	IPLA 20015	SAMN03103719	Homo sapiens	825	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
46	GCA_002845845.1	Bifidobacterium bifidum	PRI 1	SAMN06140833	Homo sapiens	825	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
47	GCA_003390735.1	Bifidobacterium bifidum	S6	SAMN07484235	Homo sapiens	825	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
48	GCA_003437325.1	Bifidobacterium bifidum	TF06-14AC	SAMN09736890	Homo sapiens	825	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
49	GCA_003437345.1	Bifidobacterium bifidum	TF06-13	SAMN09736889	Homo sapiens	825	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
50	GCA_005844365.1	Bifidobacterium bifidum	1001271st1_H11	SAMN10863260	Homo sapiens	825	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
51	GCA_008670815.1	Bifidobacterium bifidum	S08C.meta.bin_9	SAMN10316672	Homo sapiens	825	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
52	GCA_014871885.1	Bifidobacterium bifidum	COPD001	SAMN12904948	Homo sapiens	825	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
53	GCA_902386775.1	Bifidobacterium bifidum	MGYG-HGUT-02396	SAMEA5851900	-	825	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
54	GCA_003472345.1	Bifidobacterium bifidum	AM12-10	SAMN09734784	Homo sapiens	826	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
55	GCA_003473145.1	Bifidobacterium bifidum	AM12-9	SAMN09734792	Homo sapiens	826	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
56	GCA_003474045.1	Bifidobacterium bifidum	AF45-10	SAMN09734712	Homo sapiens	826	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
57	GCA_001020255.1	Bifidobacterium bifidum	156B	SAMN03097399	Homo sapiens	827	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
58	GCA_001020375.1	Bifidobacterium bifidum	324B	SAMN03097400	Homo sapiens	827	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
59	GCA_001915215.1	Bifidobacterium bifidum	62_13	SAMN05717207	Homo sapiens	827	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
60	GCA_003467985.1	Bifidobacterium bifidum	AM42-15AC	SAMN09736543	Homo sapiens	827	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
61	GCA_016069985.1	Bifidobacterium bifidum	VKPM Ac-1579	SAMN15880060	Homo sapiens	827	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
62	GCA_900112465.1	Bifidobacterium bifidum	Calf96	SAMN05216254	-	827	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
63	GCA_000165905.1	Bifidobacterium bifidum PRL2010	PRL2010	SAMN02603510	Homo sapiens	828	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
64	GCA_001020415.1	Bifidobacterium bifidum LMG 13195	LMG 13195	SAMN03103720	Homo sapiens	828	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
65	GCA_001405355.1	Bifidobacterium bifidum	2789STDY5608877	SAMEA3545285	Homo sapiens	828	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
66	GCA_003468415.1	Bifidobacterium bifidum	AM36-1AC	SAMN09736479	Homo sapiens	828	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
67	GCA_015549125.1	Bifidobacterium bifidum	1001283B150225_161107_H11	SAMN15532824	Homo sapiens	828	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
68	GCA_018375785.1	Bifidobacterium bifidum	L2_040_365G1_dasL2_040_365G1_maxbin2.maxbin.008	SAMN17801390	Homo sapiens	828	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
69	GCA_000299595.1	Bifidobacterium bifidum LMG 13195	LMG 13195	SAMN02470080	-	829	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
70	GCA_000466525.1	Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456	ATCC 29521	SAMN02436821	Homo sapiens	829	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
71	GCA_000741085.1	Bifidobacterium bifidum	LMG 11041	SAMN02673426	Homo sapiens	829	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
72	GCA_000771485.1	Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456	DSM 20456	SAMN02442030	-	829	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
73	GCA_001025135.1	Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456	JCM 1255	SAMD00061040	-	829	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
74	GCA_001576865.1	Bifidobacterium bifidum	141.5	SAMN04497897	Homo sapiens	829	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
75	GCA_002469385.1	Bifidobacterium bifidum	1 G1971	SAMN06759457	Homo sapiens	829	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
76	GCA_008669135.1	Bifidobacterium bifidum	S08A.meta.bin_5	SAMN10316648	Homo sapiens	829	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
77	GCA_013867495.1	Bifidobacterium bifidum	s-1	SAMN15579835	-	829	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
78	GCA_015549425.1	Bifidobacterium bifidum	BSD2780061687_150420_D1	SAMN15532514	Homo sapiens	829	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
79	GCA_016307165.1	Bifidobacterium bifidum	UBBB-55	SAMN16793263	Homo sapiens	829	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
80	GCA_017814645.1	Bifidobacterium bifidum	BB-G90	SAMN18436315	Homo sapiens	829	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
81	GCA_019734315.1	Bifidobacterium bifidum	K05	SAMN14389522	Homo sapiens	829	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
82	GCA_900637095.1	Bifidobacterium bifidum	NCTC13001	SAMEA4063017	-	829	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
83	GCA_003436135.1	Bifidobacterium bifidum	TM07-4AC	SAMN09737006	Homo sapiens	830	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
84	GCA_901212485.1	Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456	Bifidobacterium_bifidum_MC1	SAMEA5574692	-	830	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
85	GCA_000155395.1	Bifidobacterium bifidum NCIMB 41171	NCIMB 41171	SAMN02463676	Homo sapiens	831	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
86	GCA_000273525.1	Bifidobacterium bifidum NCIMB 41171	NCIMB 41171	SAMN02463676	Homo sapiens	831	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
87	GCA_008679685.1	Bifidobacterium bifidum	LMAG:79	SAMN06546883	Homo sapiens	831	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
88	GCA_015549755.1	Bifidobacterium bifidum	D52t1_170925_G6	SAMN15532784	Homo sapiens	831	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
89	GCA_015551545.1	Bifidobacterium bifidum	D31t1_170403_D8	SAMN15532543	Homo sapiens	831	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
90	GCA_001020265.1	Bifidobacterium bifidum	IPLA 20017	SAMN03097402	Homo sapiens	832	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
91	GCA_001311705.1	Bifidobacterium bifidum JCM 1254	JCM 1254	SAMD00000434	-	832	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
92	GCA_001685685.1	Bifidobacterium bifidum	BI-14	SAMD00047595	Homo sapiens	832	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
93	GCA_003436575.1	Bifidobacterium bifidum	TM04-12	SAMN09736968	Homo sapiens	832	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
94	GCA_003573955.1	Bifidobacterium bifidum LMG 13195	JCM 7004	SAMD00078038	Homo sapiens	832	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
95	GCA_005844205.1	Bifidobacterium bifidum	BSD2780061688st1_G1	SAMN10863272	Homo sapiens	832	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
96	GCA_015555005.1	Bifidobacterium bifidum	BSD2780061688b_171218_F12	SAMN15532763	Homo sapiens	832	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
97	GCA_015667555.1	Bifidobacterium bifidum	1001136B_160425_F1	SAMN15532708	Homo sapiens	832	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
98	GCA_000265095.1	Bifidobacterium bifidum BGN4	BGN4	SAMN02603486	Homo sapiens	833	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
99	GCA_004167365.1	Bifidobacterium bifidum	ca_0067	SAMN10239585	Homo sapiens	833	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
100	GCA_009075765.1	Bifidobacterium bifidum	BIOML-A2	SAMN11944592	Homo sapiens	833	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score

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