Document

Rank	Genome ID	Species	Strain	BioSample ID	Host	Allelic distance	ARGs	VFs	PGs	PPRS
1	GCA_022455415.1	Lactobacillus crispatus	CM_C10_S843-bin_1	SAMN25207415	Homo sapiens	0	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
2	GCA_022454135.1	Lactobacillus crispatus	Mitchell_12_29_17_B05_S610-bin_1	SAMN25207493	Homo sapiens	7	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
3	GCA_022454375.1	Lactobacillus crispatus	DZD_CM_22_S790-bin_1	SAMN25207477	Homo sapiens	7	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
4	GCA_022454495.1	Lactobacillus crispatus	DZD_CM_19_S787-bin_1	SAMN25207474	Homo sapiens	7	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
5	GCA_022454515.1	Lactobacillus crispatus	DZD_CM_17_S785-bin_1	SAMN25207473	Homo sapiens	7	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
6	GCA_022454555.1	Lactobacillus crispatus	DZD_CM_11_S779-bin_1	SAMN25207467	Homo sapiens	7	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
7	GCA_022454765.1	Lactobacillus crispatus	CM_H09_S840-bin_1	SAMN25207457	Homo sapiens	7	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
8	GCA_022455515.1	Lactobacillus crispatus	CM_B09_S834-bin_1	SAMN25207407	Homo sapiens	7	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
9	GCA_022454385.1	Lactobacillus crispatus	DZD_CM_23_S791-bin_1	SAMN25207478	Homo sapiens	8	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
10	GCA_022454435.1	Lactobacillus crispatus	DZD_CM_21_S789-bin_1	SAMN25207476	Homo sapiens	8	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
11	GCA_022454535.1	Lactobacillus crispatus	DZD_CM_15_S783-bin_1	SAMN25207471	Homo sapiens	8	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
12	GCA_022454565.1	Lactobacillus crispatus	DZD_CM_13_S781-bin_1	SAMN25207469	Homo sapiens	8	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
13	GCA_022454965.1	Lactobacillus crispatus	CM_F10_S846-bin_1	SAMN25207440	Homo sapiens	8	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
14	GCA_022455005.1	Lactobacillus crispatus	CM_F09_S838-bin_1	SAMN25207439	Homo sapiens	8	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
15	GCA_022455555.1	Lactobacillus crispatus	CM_B07_S818-bin_1	SAMN25207406	Homo sapiens	8	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
16	GCA_022454475.1	Lactobacillus crispatus	DZD_CM_16_S784-bin_1	SAMN25207472	Homo sapiens	9	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
17	GCA_022458395.1	Lactobacillus crispatus	CM_G03_S791-bin_2	SAMN25207443	Homo sapiens	9	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
18	GCA_022455755.1	Lactobacillus crispatus	CM_A01_S769-bin_1	SAMN25207395	Homo sapiens	14	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
19	GCA_002861765.1	Lactobacillus crispatus	UMB0803	SAMN08193687	Homo sapiens	23	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
20	GCA_000176975.2	Lactobacillus crispatus SJ-3C-US	SJ-3C-US	SAMN02463837	Homo sapiens	24	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
21	GCA_001541515.1	Lactobacillus crispatus	VMC5	SAMN03893603	Homo sapiens	25	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
22	GCA_001546015.1	Lactobacillus crispatus	VMC1	SAMN03893599	Homo sapiens	27	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
23	GCA_009730275.1	Lactobacillus crispatus	FDAARGOS_743	SAMN11056458	Homo sapiens	27	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
24	GCA_022455035.1	Lactobacillus crispatus	CM_F08_S830-bin_1	SAMN25207438	Homo sapiens	28	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
25	GCA_022455595.1	Lactobacillus crispatus	CM_B03_S786-bin_1	SAMN25207404	Homo sapiens	31	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
26	GCA_022454175.1	Lactobacillus crispatus	Mitchell_12_29_17_A06_S617-bin_1	SAMN25207492	Homo sapiens	33	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
27	GCA_022454675.1	Lactobacillus crispatus	DZD_CM_09_S777-bin_1	SAMN25207465	Homo sapiens	33	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
28	GCA_022454695.1	Lactobacillus crispatus	DZD_CM_03_S771-bin_1	SAMN25207460	Homo sapiens	33	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
29	GCA_022454735.1	Lactobacillus crispatus	DZD_CM_02_S770-bin_1	SAMN25207459	Homo sapiens	33	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
30	GCA_022454755.1	Lactobacillus crispatus	DZD_CM_01_S769-bin_1	SAMN25207458	Homo sapiens	33	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
31	GCA_022454835.1	Lactobacillus crispatus	CM_H03_S792-bin_1	SAMN25207453	Homo sapiens	33	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
32	GCA_022455055.1	Lactobacillus crispatus	CM_F06_S814-bin_1	SAMN25207436	Homo sapiens	33	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
33	GCA_022455175.1	Lactobacillus crispatus	CM_E04_S797-bin_1	SAMN25207428	Homo sapiens	33	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
34	GCA_022455205.1	Lactobacillus crispatus	CM_E07_S821-bin_1	SAMN25207429	Homo sapiens	33	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
35	GCA_022455235.1	Lactobacillus crispatus	CM_E03_S789-bin_1	SAMN25207427	Homo sapiens	33	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
36	GCA_022455315.1	Lactobacillus crispatus	CM_D07_S820-bin_2	SAMN25207421	Homo sapiens	33	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
37	GCA_022455375.1	Lactobacillus crispatus	CM_D04_S796-bin_1	SAMN25207419	Homo sapiens	33	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
38	GCA_022455395.1	Lactobacillus crispatus	CM_D02_S780-bin_1	SAMN25207417	Homo sapiens	33	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
39	GCA_022455475.1	Lactobacillus crispatus	CM_C05_S803-bin_1	SAMN25207412	Homo sapiens	33	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
40	GCA_022455575.1	Lactobacillus crispatus	CM_B04_S794-bin_1	SAMN25207405	Homo sapiens	33	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
41	GCA_022455615.1	Lactobacillus crispatus	CM_B02_S778-bin_1	SAMN25207403	Homo sapiens	33	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
42	GCA_022455635.1	Lactobacillus crispatus	CM_B01_S770-bin_1	SAMN25207402	Homo sapiens	33	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
43	GCA_022455735.1	Lactobacillus crispatus	CM_A04_S793-bin_1	SAMN25207398	Homo sapiens	33	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
44	GCA_022456295.1	Lactobacillus crispatus	CM_C04_S795-bin_1	SAMN25207411	Homo sapiens	33	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
45	GCA_022454015.1	Lactobacillus crispatus	Mitchell_12_29_17_F06_S622-bin_1	SAMN25207501	Homo sapiens	34	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
46	GCA_022454795.1	Lactobacillus crispatus	CM_H05_S808-bin_2	SAMN25207455	Homo sapiens	34	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
47	GCA_022454815.1	Lactobacillus crispatus	CM_H07_S824-bin_1	SAMN25207456	Homo sapiens	34	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
48	GCA_022455115.1	Lactobacillus crispatus	CM_F07_S822-bin_1	SAMN25207437	Homo sapiens	34	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
49	GCA_022455455.1	Lactobacillus crispatus	CM_C01_S771-bin_1	SAMN25207409	Homo sapiens	34	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
50	GCA_022455705.1	Lactobacillus crispatus	CM_A03_S785-bin_1	SAMN25207397	Homo sapiens	34	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
51	GCA_001541585.1	Lactobacillus crispatus	VMC8	SAMN03893606	Homo sapiens	35	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
52	GCA_022454025.1	Lactobacillus crispatus	Mitchell_12_29_17_H07_S632-bin_1	SAMN25207505	Homo sapiens	35	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
53	GCA_022454955.1	Lactobacillus crispatus	CM_G02_S783-bin_1	SAMN25207442	Homo sapiens	35	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
54	GCA_004681235.1	Lactobacillus crispatus	V4	SAMN11316524	Homo sapiens	36	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
55	GCA_022458495.1	Lactobacillus crispatus	DZD_CM_08_S776-bin_1	SAMN25207464	Homo sapiens	36	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
56	GCA_022458535.1	Lactobacillus crispatus	DZD_CM_14_S782-bin_2	SAMN25207470	Homo sapiens	36	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
57	GCA_022454115.1	Lactobacillus crispatus	Mitchell_12_29_17_B07_S626-bin_1	SAMN25207494	Homo sapiens	37	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
58	GCA_022455655.1	Lactobacillus crispatus	CM_A06_S809-bin_1	SAMN25207400	Homo sapiens	38	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
59	GCA_016162185.1	Lactobacillus crispatus	LB57	SAMN15357363	Homo sapiens	39	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
60	GCA_022454615.1	Lactobacillus crispatus	DZD_CM_04_S772-bin_1	SAMN25207461	Homo sapiens	39	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
61	GCA_022454865.1	Lactobacillus crispatus	CM_H02_S784-bin_1	SAMN25207452	Homo sapiens	41	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
62	GCA_002861775.1	Lactobacillus crispatus	UMB0044	SAMN08193688	Homo sapiens	42	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
63	GCA_015708065.1	Lactobacillus crispatus	CRI10	SAMN14772552	Homo sapiens	42	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
64	GCA_021278945.1	Lactobacillus crispatus	lc31	SAMN15862579	Homo sapiens	42	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
65	GCA_000466885.3	Lactobacillus crispatus 2029	2029	SAMN02298797	Homo sapiens	43	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
66	GCA_001541505.1	Lactobacillus crispatus	VMC6	SAMN03893604	Homo sapiens	43	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
67	GCA_004361245.1	Lactobacillus crispatus	RL15	SAMN07213196	Homo sapiens	43	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
68	GCA_004361455.1	Lactobacillus crispatus	RL30	SAMN07213210	Homo sapiens	43	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
69	GCA_004361555.1	Lactobacillus crispatus	RL14	SAMN07213195	Homo sapiens	43	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
70	GCA_015708055.1	Lactobacillus crispatus	CRI17	SAMN14773342	Homo sapiens	43	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
71	GCA_016162145.1	Lactobacillus crispatus	LB58	SAMN15357364	Homo sapiens	43	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
72	GCA_000301115.1	Lactobacillus crispatus FB049-03	FB049-03	SAMN02463886	Homo sapiens	44	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
73	GCA_004361075.1	Lactobacillus crispatus	RL32	SAMN07213212	Homo sapiens	44	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
74	GCA_004361095.1	Lactobacillus crispatus	RL31	SAMN07213211	Homo sapiens	44	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
75	GCA_004361215.1	Lactobacillus crispatus	RL17	SAMN07213198	Homo sapiens	44	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
76	GCA_004361315.1	Lactobacillus crispatus	RL08	SAMN07213190	Homo sapiens	44	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
77	GCA_004361515.1	Lactobacillus crispatus	RL20	SAMN07213200	Homo sapiens	44	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
78	GCA_016162165.1	Lactobacillus crispatus	LB59	SAMN15357365	Homo sapiens	44	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
79	GCA_000301135.1	Lactobacillus crispatus FB077-07	FB077-07	SAMN02463885	Homo sapiens	45	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
80	GCA_004361175.1	Lactobacillus crispatus	RL26	SAMN07213206	Homo sapiens	45	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
81	GCA_015708075.1	Lactobacillus crispatus	CRI8	SAMN14771635	Homo sapiens	45	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
82	GCA_016093195.1	Lactobacillus crispatus	C0176A1	SAMN17001304	Homo sapiens	45	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
83	GCA_022455155.1	Lactobacillus crispatus	CM_E08_S829-bin_1	SAMN25207430	Homo sapiens	45	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
84	GCA_022455185.1	Lactobacillus crispatus	CM_E09_S837-bin_2	SAMN25207431	Homo sapiens	45	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
85	GCA_022456605.1	Lactobacillus crispatus	0795_578_1_1_MRS5_S810-bin_1	SAMN25207551	Homo sapiens	45	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
86	GCA_003971565.1	Lactobacillus crispatus	AB70	SAMN08409124	Homo sapiens	46	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
87	GCA_004361115.1	Lactobacillus crispatus	RL29	SAMN07213209	Homo sapiens	46	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
88	GCA_004361185.1	Lactobacillus crispatus	RL24	SAMN07213204	Homo sapiens	46	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
89	GCA_004361205.1	Lactobacillus crispatus	RL19	SAMN07213199	Homo sapiens	46	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
90	GCA_004361265.1	Lactobacillus crispatus	RL13	SAMN07213194	Homo sapiens	46	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
91	GCA_004361295.1	Lactobacillus crispatus	RL11	SAMN07213193	Homo sapiens	46	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
92	GCA_004361345.1	Lactobacillus crispatus	RL05	SAMN07213187	Homo sapiens	46	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
93	GCA_004361395.1	Lactobacillus crispatus	RL33	SAMN07213213	Homo sapiens	46	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
94	GCA_004361635.1	Lactobacillus crispatus	RL06	SAMN07213188	Homo sapiens	46	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
95	GCA_018885325.1	Lactobacillus crispatus	PMC201	SAMN19601668	-	46	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
96	GCA_019277925.1	Lactobacillus crispatus	10.2	SAMN18809436	Homo sapiens	46	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
97	GCA_004361125.1	Lactobacillus crispatus	RL28	SAMN07213208	Homo sapiens	47	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
98	GCA_004361195.1	Lactobacillus crispatus	RL21	SAMN07213201	Homo sapiens	47	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
99	GCA_004361355.1	Lactobacillus crispatus	RL07	SAMN07213189	Homo sapiens	47	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
100	GCA_004361385.1	Lactobacillus crispatus	RL03	SAMN07213108	Homo sapiens	47	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score

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Antimicrobial resistance genes

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