ORF_ID e_value Gene_name EC_number CAZy COGs Description
PAKBJLMI_00001 1.3e-19 phoU P Plays a role in the regulation of phosphate uptake
PAKBJLMI_00002 3e-43 yfdV S Membrane transport protein
PAKBJLMI_00003 4.7e-08 rplJ J Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
PAKBJLMI_00004 1.4e-23 rplL J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
PAKBJLMI_00005 2.2e-29 rsmC 2.1.1.172 J Methyltransferase
PAKBJLMI_00006 5.3e-09
PAKBJLMI_00007 2.2e-18 dnaX 2.7.7.7 L DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
PAKBJLMI_00008 5.1e-32 dnaX 2.7.7.7 L DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
PAKBJLMI_00009 1.3e-39 tnpB L Putative transposase DNA-binding domain
PAKBJLMI_00010 4.7e-15 yaaK S Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
PAKBJLMI_00011 3.7e-70 recR L May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
PAKBJLMI_00012 1.1e-34 S Protein of unknown function (DUF2508)
PAKBJLMI_00013 2.3e-116 tmk 2.7.4.9 F Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
PAKBJLMI_00014 6.5e-70 holB 2.7.7.7 L DNA polymerase III
PAKBJLMI_00015 1.1e-34 holB 2.7.7.7 L DNA polymerase III
PAKBJLMI_00016 3e-60 yabA L Involved in initiation control of chromosome replication
PAKBJLMI_00017 1.1e-81 rsmI 2.1.1.198 H Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
PAKBJLMI_00018 5.3e-50 rsmI 2.1.1.198 H Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
PAKBJLMI_00019 9.7e-31 fat 3.1.2.21 I Acyl-ACP thioesterase
PAKBJLMI_00020 2.1e-102 fat 3.1.2.21 I Acyl-ACP thioesterase
PAKBJLMI_00021 5.1e-35 S ECF transporter, substrate-specific component
PAKBJLMI_00022 1.7e-38 S ECF transporter, substrate-specific component
PAKBJLMI_00023 1.4e-133 yeaZ 2.3.1.234 O Universal bacterial protein YeaZ
PAKBJLMI_00024 3.3e-106 rimI 2.3.1.128 K Ribosomal-protein-alanine acetyltransferase
PAKBJLMI_00025 1.1e-197 tsaD 2.3.1.234 J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
PAKBJLMI_00026 1.3e-131 deoC 4.1.2.4 F Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
PAKBJLMI_00027 2.1e-182 S Oxidoreductase family, NAD-binding Rossmann fold
PAKBJLMI_00028 4.9e-128 yegW K UTRA
PAKBJLMI_00029 6.5e-234 yfdE 2.8.3.16, 2.8.3.19 C Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate
PAKBJLMI_00030 4.3e-266 frc 2.8.3.16, 2.8.3.19 C Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate
PAKBJLMI_00031 0.0 oxc 4.1.1.8 EH Belongs to the TPP enzyme family
PAKBJLMI_00032 0.0 uup S ABC transporter, ATP-binding protein
PAKBJLMI_00033 1.3e-111 rex K Modulates transcription in response to changes in cellular NADH NAD( ) redox state
PAKBJLMI_00034 1e-184 scrR K helix_turn _helix lactose operon repressor
PAKBJLMI_00035 5.6e-296 scrB 3.2.1.26 GH32 G invertase
PAKBJLMI_00036 0.0 scrA 2.7.1.208, 2.7.1.211, 5.3.1.1 G phosphotransferase system
PAKBJLMI_00037 5.8e-75
PAKBJLMI_00038 1.1e-77 XK27_02470 K LytTr DNA-binding domain
PAKBJLMI_00039 6.9e-128 liaI S membrane
PAKBJLMI_00040 6.7e-44 groS O Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
PAKBJLMI_00041 5.9e-294 groL O Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
PAKBJLMI_00042 4.5e-39 mutS L that it carries out the mismatch recognition step. This protein has a weak ATPase activity
PAKBJLMI_00043 0.0 mutS L that it carries out the mismatch recognition step. This protein has a weak ATPase activity
PAKBJLMI_00044 0.0 mutL L This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
PAKBJLMI_00045 2.7e-103 ruvA 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
PAKBJLMI_00046 4.6e-188 ruvB 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
PAKBJLMI_00047 1.1e-47 yajC U Preprotein translocase
PAKBJLMI_00048 5.3e-286 zwf 1.1.1.363, 1.1.1.49 G Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
PAKBJLMI_00049 2.1e-213 dinB 2.7.7.7 L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
PAKBJLMI_00050 6.1e-182 nrnA 3.1.13.3, 3.1.3.7 S DHHA1 domain protein
PAKBJLMI_00051 3.3e-229 cshB 3.6.4.13 JKL DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures
PAKBJLMI_00052 0.0 alaS 6.1.1.7 J Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
PAKBJLMI_00053 2e-42 yrzL S Belongs to the UPF0297 family
PAKBJLMI_00054 2.7e-73 yqgF J Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
PAKBJLMI_00055 2.8e-51 yrzB S Belongs to the UPF0473 family
PAKBJLMI_00056 0.0 mutS2 L Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
PAKBJLMI_00057 6e-54 trxA O Belongs to the thioredoxin family
PAKBJLMI_00058 5.7e-35 mscL M Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
PAKBJLMI_00059 2.3e-69 yslB S Protein of unknown function (DUF2507)
PAKBJLMI_00060 3.8e-145 murI 3.6.1.66, 5.1.1.3 M Provides the (R)-glutamate required for cell wall biosynthesis
PAKBJLMI_00061 1.1e-110 rdgB 3.6.1.66, 5.1.1.3 F Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
PAKBJLMI_00062 8.2e-130 ykuT M mechanosensitive ion channel
PAKBJLMI_00063 3.6e-09 WQ51_05790 S protein containing a divergent version of the methyl-accepting chemotaxis-like domain
PAKBJLMI_00064 2.1e-45
PAKBJLMI_00065 7.5e-216 pepQ 3.4.13.9 E Creatinase/Prolidase N-terminal domain
PAKBJLMI_00066 2.9e-182 ccpA K catabolite control protein A
PAKBJLMI_00067 2.4e-83 ugpQ 3.1.4.46 C glycerophosphoryl diester phosphodiesterase
PAKBJLMI_00068 3.1e-167 ugpQ 3.1.4.46 C glycerophosphoryl diester phosphodiesterase
PAKBJLMI_00069 1.9e-55
PAKBJLMI_00070 4.7e-210 yunD 3.1.3.5 F Belongs to the 5'-nucleotidase family
PAKBJLMI_00071 1.1e-46 yunD 3.1.3.5 F Belongs to the 5'-nucleotidase family
PAKBJLMI_00072 1.3e-81 yutD S Protein of unknown function (DUF1027)
PAKBJLMI_00073 7.5e-146 nagD 2.7.1.25, 3.1.3.41 G Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro
PAKBJLMI_00074 1.1e-107 S Protein of unknown function (DUF1461)
PAKBJLMI_00075 2.3e-116 dedA S SNARE-like domain protein
PAKBJLMI_00076 1.1e-150 yumC 1.18.1.2, 1.19.1.1, 1.8.1.9 C Ferredoxin--NADP reductase
PAKBJLMI_00095 7.1e-74 nudG 3.6.1.55, 3.6.1.65 L NUDIX domain
PAKBJLMI_00096 0.0 L Helicase C-terminal domain protein
PAKBJLMI_00097 1.6e-45 L Helicase C-terminal domain protein
PAKBJLMI_00109 2.3e-223 mgs 2.4.1.337 GT4 M Glycosyl transferase 4-like domain
PAKBJLMI_00110 2.9e-201 cpoA GT4 M Glycosyltransferase, group 1 family protein
PAKBJLMI_00111 4.7e-180 mprF S Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
PAKBJLMI_00112 0.0 ltaS 2.7.8.20 M Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
PAKBJLMI_00113 7.5e-25 secG U Preprotein translocase
PAKBJLMI_00114 0.0 rnr J 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs
PAKBJLMI_00115 7.4e-77 smpB J the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
PAKBJLMI_00117 4.2e-189 manL 2.7.1.191 G PTS system sorbose subfamily IIB component
PAKBJLMI_00118 2.5e-136 manY G PTS system
PAKBJLMI_00119 6.3e-176 manN G system, mannose fructose sorbose family IID component
PAKBJLMI_00120 4e-65 manO S Domain of unknown function (DUF956)
PAKBJLMI_00121 3.7e-160 K Transcriptional regulator
PAKBJLMI_00122 3.9e-69 S transferase hexapeptide repeat
PAKBJLMI_00123 9.2e-248 cycA E Amino acid permease
PAKBJLMI_00124 0.0 adhE 1.1.1.1, 1.2.1.10 C belongs to the iron- containing alcohol dehydrogenase family
PAKBJLMI_00125 0.0 glmS 2.6.1.16 M Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
PAKBJLMI_00126 7.3e-225 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
PAKBJLMI_00127 1.3e-136 4.1.1.44 S Carboxymuconolactone decarboxylase family
PAKBJLMI_00128 2.1e-70 apfA 2.7.7.72, 3.6.1.61 F Nudix hydrolase
PAKBJLMI_00129 0.0 pckA 4.1.1.49 H Phosphoenolpyruvate carboxykinase
PAKBJLMI_00130 0.0 S TerB-C domain
PAKBJLMI_00131 1.4e-253 P P-loop Domain of unknown function (DUF2791)
PAKBJLMI_00132 0.0 lhr L DEAD DEAH box helicase
PAKBJLMI_00133 4.3e-62
PAKBJLMI_00134 7.1e-231 amtB P ammonium transporter
PAKBJLMI_00135 6.8e-144 nfrA 1.5.1.38, 1.5.1.39 C nitroreductase
PAKBJLMI_00137 0.0 L Type III restriction enzyme, res subunit
PAKBJLMI_00138 2.5e-267 S AAA ATPase domain
PAKBJLMI_00139 2.8e-48 S AAA ATPase domain
PAKBJLMI_00140 2.9e-106 dam2 2.1.1.72 L DNA methyltransferase
PAKBJLMI_00141 1.7e-26 dam2 2.1.1.72 L DNA methyltransferase
PAKBJLMI_00142 7.1e-124 2.1.1.72 V site-specific DNA-methyltransferase (adenine-specific) activity
PAKBJLMI_00144 6.3e-57
PAKBJLMI_00145 1.9e-211 D COG1674 DNA segregation ATPase FtsK SpoIIIE and related proteins
PAKBJLMI_00147 7.7e-186 repB EP Plasmid replication protein
PAKBJLMI_00148 2.8e-12
PAKBJLMI_00149 4.9e-229 L Belongs to the 'phage' integrase family
PAKBJLMI_00150 1.3e-69 S Iron-sulphur cluster biosynthesis
PAKBJLMI_00151 5.1e-33
PAKBJLMI_00152 5.9e-67
PAKBJLMI_00153 3.1e-172 pphA 3.1.3.16 T Calcineurin-like phosphoesterase
PAKBJLMI_00154 5.6e-13
PAKBJLMI_00155 2.1e-252 celB G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PAKBJLMI_00156 2.5e-161 O protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
PAKBJLMI_00157 7.8e-70 M LysM domain protein
PAKBJLMI_00158 4.1e-195 D nuclear chromosome segregation
PAKBJLMI_00159 4.9e-110 5.4.2.11 G Phosphoglycerate mutase family
PAKBJLMI_00160 6.6e-107 5.4.2.11 G Histidine phosphatase superfamily (branch 1)
PAKBJLMI_00161 1e-119 VY92_08690 5.3.1.32 G Antibiotic biosynthesis monooxygenase
PAKBJLMI_00162 5.4e-52 glpQ 3.1.4.46 C glycerophosphoryl diester phosphodiesterase
PAKBJLMI_00163 3.9e-184 msmR K helix_turn _helix lactose operon repressor
PAKBJLMI_00164 2.7e-249 G Bacterial extracellular solute-binding protein
PAKBJLMI_00165 4.5e-163 msmF P ABC-type sugar transport systems, permease components
PAKBJLMI_00166 3.3e-155 msmG G Binding-protein-dependent transport system inner membrane component
PAKBJLMI_00167 7.3e-230 sacA 3.2.1.26 GH32 G Glycosyl hydrolases family 32
PAKBJLMI_00168 6.5e-212 msmX P Belongs to the ABC transporter superfamily
PAKBJLMI_00169 2.6e-285 gtfA 2.4.1.7 GH13 G Sucrose glucosyltransferase
PAKBJLMI_00170 6.1e-70 EGP Major facilitator Superfamily
PAKBJLMI_00172 4.9e-177 pfoS S Phosphotransferase system, EIIC
PAKBJLMI_00173 3.9e-276 slpX S SLAP domain
PAKBJLMI_00176 4e-209
PAKBJLMI_00177 2.5e-121 gntR1 K UTRA
PAKBJLMI_00178 1.5e-70 tagD 2.7.7.15, 2.7.7.39 IM Glycerol-3-phosphate cytidylyltransferase
PAKBJLMI_00179 8e-134 tagA 2.4.1.187 GT26 F Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, the first committed lipid intermediate in the de novo synthesis of teichoic acid
PAKBJLMI_00180 1.1e-206 csaB M Glycosyl transferases group 1
PAKBJLMI_00181 1.4e-286 pncB 6.3.4.21 F Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
PAKBJLMI_00182 6.1e-154 nadE 6.3.1.5 F Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source
PAKBJLMI_00183 0.0 pacL 3.6.3.8 P P-type ATPase
PAKBJLMI_00184 2.9e-226 M CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase
PAKBJLMI_00185 1.1e-256 epsU S Polysaccharide biosynthesis protein
PAKBJLMI_00186 9.7e-137 M Glycosyltransferase sugar-binding region containing DXD motif
PAKBJLMI_00187 4.3e-64 ydcK S Belongs to the SprT family
PAKBJLMI_00189 2.8e-114 acmC 3.2.1.17, 3.2.1.96 NU mannosyl-glycoprotein
PAKBJLMI_00190 0.0 pcrA 3.6.4.12 L ATP-dependent DNA helicase
PAKBJLMI_00191 0.0 ligA 6.5.1.2 L DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
PAKBJLMI_00192 1.1e-201 camS S sex pheromone
PAKBJLMI_00193 2.6e-49 gatC 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
PAKBJLMI_00194 5.8e-261 gatA 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
PAKBJLMI_00195 1.9e-275 gatB 6.1.1.12, 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
PAKBJLMI_00196 4.2e-172 yegS 2.7.1.107 G Lipid kinase
PAKBJLMI_00197 2.2e-112 ybhL S Belongs to the BI1 family
PAKBJLMI_00198 4.1e-56
PAKBJLMI_00199 1.5e-245 nhaC C Na H antiporter NhaC
PAKBJLMI_00200 9.6e-258 rumA 2.1.1.190 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
PAKBJLMI_00201 1.6e-22
PAKBJLMI_00202 1.1e-62
PAKBJLMI_00203 0.0 cadA 3.6.3.3, 3.6.3.5 P E1-E2 ATPase
PAKBJLMI_00204 3.9e-34 copZ C Heavy-metal-associated domain
PAKBJLMI_00205 5e-96 dps P Belongs to the Dps family
PAKBJLMI_00206 8.1e-114 rcfA 4.1.99.16, 4.2.3.22, 4.2.3.75 K Transcriptional regulator, Crp Fnr family
PAKBJLMI_00207 2.8e-113 ung2 3.2.2.27 L Uracil-DNA glycosylase
PAKBJLMI_00208 1.2e-48 5.1.1.13 M Asp/Glu/Hydantoin racemase
PAKBJLMI_00209 6.5e-57 5.1.1.13 M Asp/Glu/Hydantoin racemase
PAKBJLMI_00210 9e-192 L Recombinase
PAKBJLMI_00211 7.8e-94 L Resolvase, N terminal domain
PAKBJLMI_00212 1.4e-178 L Recombinase zinc beta ribbon domain
PAKBJLMI_00213 6.6e-95 MA20_25245 K Acetyltransferase (GNAT) domain
PAKBJLMI_00218 3.9e-244 emrY EGP Major facilitator Superfamily
PAKBJLMI_00219 6.8e-136 S CAAX protease self-immunity
PAKBJLMI_00220 5e-90 yxdD K Bacterial regulatory proteins, tetR family
PAKBJLMI_00221 0.0 4.2.1.53 S Myosin-crossreactive antigen
PAKBJLMI_00222 8.4e-78 2.3.1.128 K acetyltransferase
PAKBJLMI_00223 1.8e-161 S reductase
PAKBJLMI_00224 3.6e-109 V ABC-type multidrug transport system, ATPase and permease components
PAKBJLMI_00225 5.1e-128 cydD V cysteine transport
PAKBJLMI_00226 2.1e-241 pyrP F Permease
PAKBJLMI_00227 9.5e-92 pyrR 2.4.2.9 F Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
PAKBJLMI_00228 1.5e-86 3.1.3.102, 3.1.3.104 S Sucrose-6F-phosphate phosphohydrolase
PAKBJLMI_00229 2.4e-50 3.1.3.102, 3.1.3.104 Q phosphatase activity
PAKBJLMI_00230 1.6e-253 emrY EGP Major facilitator Superfamily
PAKBJLMI_00231 4e-215 mdtG EGP Major facilitator Superfamily
PAKBJLMI_00232 1.8e-165 mleP3 S Membrane transport protein
PAKBJLMI_00233 2.1e-210 pepA E M42 glutamyl aminopeptidase
PAKBJLMI_00234 0.0 ybiT S ABC transporter, ATP-binding protein
PAKBJLMI_00235 9.8e-146
PAKBJLMI_00236 9e-150 glnH ET ABC transporter
PAKBJLMI_00237 2.3e-78 K Transcriptional regulator, MarR family
PAKBJLMI_00238 1.1e-306 XK27_09600 V ABC transporter, ATP-binding protein
PAKBJLMI_00239 0.0 V ABC transporter transmembrane region
PAKBJLMI_00240 2.9e-102 S ABC-type cobalt transport system, permease component
PAKBJLMI_00241 7.2e-115 udk 2.7.1.48 F Zeta toxin
PAKBJLMI_00242 7.4e-135 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
PAKBJLMI_00243 1.3e-148 glnH ET ABC transporter substrate-binding protein
PAKBJLMI_00244 6.1e-93 gluC P ABC transporter permease
PAKBJLMI_00245 1.9e-110 glnP P ABC transporter permease
PAKBJLMI_00246 1.5e-174 S Protein of unknown function (DUF2974)
PAKBJLMI_00247 1.2e-63
PAKBJLMI_00248 4.8e-238 G Bacterial extracellular solute-binding protein
PAKBJLMI_00249 4.1e-163 2.7.7.12 C Domain of unknown function (DUF4931)
PAKBJLMI_00250 1.7e-165 rbsK 2.7.1.15 H Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
PAKBJLMI_00251 5.9e-126 rpiA 2.7.1.12, 2.7.1.15, 5.3.1.6 G Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
PAKBJLMI_00252 0.0 kup P Transport of potassium into the cell
PAKBJLMI_00253 6.3e-176 rihB 3.2.2.1 F Nucleoside
PAKBJLMI_00254 3.3e-135 gntR K UbiC transcription regulator-associated domain protein
PAKBJLMI_00255 2.6e-22
PAKBJLMI_00256 1.2e-112
PAKBJLMI_00257 2.9e-285 V ABC transporter transmembrane region
PAKBJLMI_00258 1.8e-153 S hydrolase
PAKBJLMI_00259 5.3e-72 K helix_turn_helix multiple antibiotic resistance protein
PAKBJLMI_00260 2.7e-115 lmrA 3.6.3.44 V ABC transporter
PAKBJLMI_00261 7.9e-177 lmrA 3.6.3.44 V ABC transporter
PAKBJLMI_00262 1.9e-59 S Enterocin A Immunity
PAKBJLMI_00263 1.3e-137 glcR K DeoR C terminal sensor domain
PAKBJLMI_00264 0.0 xfp 4.1.2.22, 4.1.2.9 G Phosphoketolase
PAKBJLMI_00265 5.3e-161 rssA S Phospholipase, patatin family
PAKBJLMI_00266 3.8e-224 2.7.13.3 T GHKL domain
PAKBJLMI_00267 5e-145 K LytTr DNA-binding domain
PAKBJLMI_00268 3.4e-222 S CAAX protease self-immunity
PAKBJLMI_00269 2.3e-153 S hydrolase
PAKBJLMI_00270 0.0 glvC 2.7.1.199, 2.7.1.208, 2.7.1.211 G phosphotransferase system, EIIB
PAKBJLMI_00271 1.9e-147 glvR K Helix-turn-helix domain, rpiR family
PAKBJLMI_00272 2.9e-82
PAKBJLMI_00273 1.1e-86 pts23A G phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
PAKBJLMI_00274 1.9e-40
PAKBJLMI_00275 1.7e-119 C nitroreductase
PAKBJLMI_00276 1.1e-248 yhdP S Transporter associated domain
PAKBJLMI_00277 2.2e-102 hpt 2.4.2.8 F Belongs to the purine pyrimidine phosphoribosyltransferase family
PAKBJLMI_00278 1.5e-228 potE E amino acid
PAKBJLMI_00279 1.1e-130 M Glycosyl hydrolases family 25
PAKBJLMI_00280 2.6e-209 yfmL 3.6.4.13 L DEAD DEAH box helicase
PAKBJLMI_00281 5.9e-244 celB G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PAKBJLMI_00284 4.1e-217 mnaA 5.1.3.14 G Belongs to the UDP-N-acetylglucosamine 2-epimerase family
PAKBJLMI_00285 4.3e-89 gtcA S Teichoic acid glycosylation protein
PAKBJLMI_00286 1.2e-79 fld C Flavodoxin
PAKBJLMI_00287 1.1e-163 map 3.4.11.18 E Methionine Aminopeptidase
PAKBJLMI_00288 4.1e-151 yihY S Belongs to the UPF0761 family
PAKBJLMI_00289 3.3e-169 galU 2.7.7.9 M UTP-glucose-1-phosphate uridylyltransferase
PAKBJLMI_00290 5.1e-215 atoB 1.1.1.88, 2.3.1.9 I Belongs to the thiolase family
PAKBJLMI_00291 1.3e-218 mvaA 1.1.1.34, 1.1.1.88, 2.3.1.9 C Belongs to the HMG-CoA reductase family
PAKBJLMI_00292 7.1e-217 mvaS 2.3.3.10 I Hydroxymethylglutaryl-CoA synthase
PAKBJLMI_00293 1.9e-46
PAKBJLMI_00294 1.5e-177 D Alpha beta
PAKBJLMI_00295 6e-263 rumA 2.1.1.190, 2.1.1.35 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
PAKBJLMI_00296 1.7e-145 recX 2.4.1.337 GT4 S Regulatory protein RecX
PAKBJLMI_00298 2e-67
PAKBJLMI_00299 1.2e-71
PAKBJLMI_00300 5.2e-50 hlyX S Transporter associated domain
PAKBJLMI_00301 2.4e-99 hlyX S Transporter associated domain
PAKBJLMI_00302 7.7e-285 prfC J Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
PAKBJLMI_00303 6.7e-44 XK27_09445 S Domain of unknown function (DUF1827)
PAKBJLMI_00304 0.0 clpE O Belongs to the ClpA ClpB family
PAKBJLMI_00305 8.5e-41 ptsH G phosphocarrier protein HPR
PAKBJLMI_00306 0.0 ptsI 2.7.3.9 G General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
PAKBJLMI_00307 1e-66 spxA 1.20.4.1 K Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
PAKBJLMI_00308 8.8e-128 mecA NOT Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis
PAKBJLMI_00309 1.2e-160 coiA 3.6.4.12 S Competence protein
PAKBJLMI_00310 1.2e-114 yjbH Q Thioredoxin
PAKBJLMI_00311 9.5e-112 yjbK S CYTH
PAKBJLMI_00312 2.3e-113 yjbM 2.7.6.5 S RelA SpoT domain protein
PAKBJLMI_00313 1.6e-151 nadK 2.7.1.23 F Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
PAKBJLMI_00314 8.3e-173 rluD 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
PAKBJLMI_00315 0.0 mycA 4.2.1.53 S Myosin-crossreactive antigen
PAKBJLMI_00316 2e-118 S SNARE associated Golgi protein
PAKBJLMI_00317 1.7e-201 pgl 3.1.1.31 G Lactonase, 7-bladed beta-propeller
PAKBJLMI_00318 0.0 pacL 3.6.3.8, 3.6.3.9 P Cation transporter/ATPase, N-terminus
PAKBJLMI_00319 2.2e-66 srlB 2.7.1.198 G PTS system glucitol/sorbitol-specific IIA component
PAKBJLMI_00320 3.2e-212 yubA S AI-2E family transporter
PAKBJLMI_00321 1.3e-104 trmL 2.1.1.207 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
PAKBJLMI_00322 1.8e-68 WQ51_03320 S Protein of unknown function (DUF1149)
PAKBJLMI_00323 0.0 ftsK D Belongs to the FtsK SpoIIIE SftA family
PAKBJLMI_00324 3.5e-227 2.7.1.26, 2.7.7.2 S Peptidase M16 inactive domain protein
PAKBJLMI_00325 4.5e-241 S Peptidase M16
PAKBJLMI_00326 2e-132 IQ Enoyl-(Acyl carrier protein) reductase
PAKBJLMI_00327 6.6e-119 ymfM S Helix-turn-helix domain
PAKBJLMI_00328 9.3e-98 pgsA 2.7.8.41, 2.7.8.5 I Belongs to the CDP-alcohol phosphatidyltransferase class-I family
PAKBJLMI_00329 7.9e-194 recA L Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
PAKBJLMI_00330 8.7e-221 rny S Endoribonuclease that initiates mRNA decay
PAKBJLMI_00331 1.8e-212 tagO 2.7.8.33, 2.7.8.35 M transferase
PAKBJLMI_00332 9.6e-118 yvyE 3.4.13.9 S YigZ family
PAKBJLMI_00333 3.3e-247 comFA L Helicase C-terminal domain protein
PAKBJLMI_00334 3.1e-135 comFC S Competence protein
PAKBJLMI_00335 5.5e-95 hpf J Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
PAKBJLMI_00336 0.0 secA U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
PAKBJLMI_00337 3.5e-188 prfB J Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
PAKBJLMI_00339 5.4e-178 hprK F Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
PAKBJLMI_00340 1.4e-158 lgt 2.1.1.199 M Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
PAKBJLMI_00341 6.1e-188 gpsA 1.1.1.94 I Glycerol-3-phosphate dehydrogenase
PAKBJLMI_00342 1.2e-177 trxB 1.8.1.9 C Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
PAKBJLMI_00343 0.0 glgB 2.4.1.18, 3.2.1.141, 3.2.1.20 CBM48,GH13,GH31 G Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
PAKBJLMI_00344 2.9e-223 glgC 2.7.7.27 H Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
PAKBJLMI_00345 7.2e-214 glgD 2.4.1.21, 2.7.7.27 GT5 G Nucleotidyl transferase
PAKBJLMI_00346 2.8e-287 glgA 2.4.1.21 GT5 F Synthesizes alpha-1,4-glucan chains using ADP-glucose
PAKBJLMI_00347 0.0 glgP 2.4.1.1 GT35 G Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties
PAKBJLMI_00348 0.0 malQ 2.4.1.25, 3.2.1.20, 3.2.1.41 CBM48,GH13,GH31,GH77 G Belongs to the glycosyl hydrolase 13 family
PAKBJLMI_00349 0.0 pgm 5.4.2.2, 5.4.2.8 G Phosphoglucomutase phosphomannomutase, alpha beta alpha domain
PAKBJLMI_00350 0.0 uvrB L damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
PAKBJLMI_00351 0.0 uvrA L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
PAKBJLMI_00352 1.1e-90 S Short repeat of unknown function (DUF308)
PAKBJLMI_00353 3.6e-91 rapZ S Displays ATPase and GTPase activities
PAKBJLMI_00354 2.8e-63 rapZ S Displays ATPase and GTPase activities
PAKBJLMI_00355 8.1e-196 ybhK S Required for morphogenesis under gluconeogenic growth conditions
PAKBJLMI_00356 6.8e-170 whiA K May be required for sporulation
PAKBJLMI_00357 4.7e-100 clpP 3.4.21.92 O Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
PAKBJLMI_00358 0.0 S SH3-like domain
PAKBJLMI_00359 1.3e-276 ycaM E amino acid
PAKBJLMI_00361 8.6e-190 cggR K Putative sugar-binding domain
PAKBJLMI_00362 3.8e-190 gap 1.2.1.12 G Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
PAKBJLMI_00363 3.5e-227 pgk 2.7.2.3, 5.3.1.1 F Belongs to the phosphoglycerate kinase family
PAKBJLMI_00364 9.9e-143 tpiA 2.7.2.3, 5.3.1.1 G Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
PAKBJLMI_00365 4.6e-38
PAKBJLMI_00366 3.1e-156 ycsE S Sucrose-6F-phosphate phosphohydrolase
PAKBJLMI_00367 2.6e-137 ung 3.2.2.27 L Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
PAKBJLMI_00368 1.8e-181 pta 2.3.1.8, 3.6.3.21 C phosphate acetyltransferase
PAKBJLMI_00369 4.1e-86 ydiB 2.7.1.221, 5.1.1.1 O Hydrolase, P-loop family
PAKBJLMI_00370 1e-98 dnaQ 2.7.7.7 L DNA polymerase III
PAKBJLMI_00371 2.4e-164 murB 1.3.1.98 M Cell wall formation
PAKBJLMI_00372 9.1e-206 potA 3.6.3.30, 3.6.3.31 P Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
PAKBJLMI_00373 1.1e-136 potB P ABC transporter permease
PAKBJLMI_00374 2.9e-132 potC P ABC transporter permease
PAKBJLMI_00375 1e-206 potD P ABC transporter
PAKBJLMI_00376 1.1e-150 dacA 2.7.7.85 S Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
PAKBJLMI_00377 1.2e-172 ybbR S YbbR-like protein
PAKBJLMI_00378 3.9e-259 glmM 5.4.2.10 G Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
PAKBJLMI_00379 1.3e-148 S hydrolase
PAKBJLMI_00380 1.3e-145 S Sucrose-6F-phosphate phosphohydrolase
PAKBJLMI_00381 1e-120
PAKBJLMI_00382 1.2e-73 ptpA 3.1.3.48 T Belongs to the low molecular weight phosphotyrosine protein phosphatase family
PAKBJLMI_00383 6.7e-212 glxK 2.7.1.165 G Belongs to the glycerate kinase type-1 family
PAKBJLMI_00384 3.4e-152 licT K CAT RNA binding domain
PAKBJLMI_00385 0.0 bglP 2.7.1.208, 2.7.1.211 G phosphotransferase system
PAKBJLMI_00386 3.1e-286 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
PAKBJLMI_00387 4.2e-175 D Alpha beta
PAKBJLMI_00388 0.0 E Amino acid permease
PAKBJLMI_00390 2.2e-27 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
PAKBJLMI_00391 1.9e-92 S VanZ like family
PAKBJLMI_00392 2e-132 yebC K Transcriptional regulatory protein
PAKBJLMI_00393 7.9e-23 comGA NU Type II IV secretion system protein
PAKBJLMI_00394 1.7e-142 comGA NU Type II IV secretion system protein
PAKBJLMI_00395 9.9e-175 comGB NU type II secretion system
PAKBJLMI_00396 2.4e-46 comGC U competence protein ComGC
PAKBJLMI_00397 2e-71
PAKBJLMI_00398 1e-19
PAKBJLMI_00399 1.3e-86 comGF U Putative Competence protein ComGF
PAKBJLMI_00400 3e-187 ytxK 2.1.1.72 L N-6 DNA Methylase
PAKBJLMI_00401 2.7e-219 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
PAKBJLMI_00403 4.3e-121 M Protein of unknown function (DUF3737)
PAKBJLMI_00404 8.1e-176 patB 4.4.1.8 E Aminotransferase, class I
PAKBJLMI_00405 5.7e-29 4.4.1.8 E Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
PAKBJLMI_00406 2.3e-192 manA 5.3.1.8 G mannose-6-phosphate isomerase
PAKBJLMI_00407 4.9e-61 S SdpI/YhfL protein family
PAKBJLMI_00408 1.4e-95 K Transcriptional regulatory protein, C terminal
PAKBJLMI_00409 6.2e-271 T PhoQ Sensor
PAKBJLMI_00410 1.6e-61 limB 1.14.13.107, 1.14.13.162 C Luciferase-like monooxygenase
PAKBJLMI_00411 2.2e-123 XK27_00915 C Luciferase-like monooxygenase
PAKBJLMI_00412 0.0 ltaS 2.7.8.20 M Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
PAKBJLMI_00413 4.1e-107 vanZ V VanZ like family
PAKBJLMI_00414 1.6e-260 pgi 5.3.1.9 G Belongs to the GPI family
PAKBJLMI_00415 9.9e-250 EGP Major facilitator Superfamily
PAKBJLMI_00416 1.6e-196 ampC V Beta-lactamase
PAKBJLMI_00419 2e-64
PAKBJLMI_00420 2.9e-287 S DNA primase
PAKBJLMI_00421 1.6e-35
PAKBJLMI_00422 1.9e-33
PAKBJLMI_00423 8.1e-69
PAKBJLMI_00424 1.4e-36
PAKBJLMI_00425 2.9e-12 S Helix-turn-helix domain
PAKBJLMI_00426 3.2e-58 K Transcriptional
PAKBJLMI_00427 9.5e-208 sip L Belongs to the 'phage' integrase family
PAKBJLMI_00428 2e-263 murF 6.3.2.10, 6.3.2.13 M Domain of unknown function (DUF1727)
PAKBJLMI_00429 4.5e-114 tdk 2.7.1.21 F thymidine kinase
PAKBJLMI_00430 3.4e-181 prfA J Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
PAKBJLMI_00431 7.8e-157 prmB 2.1.1.297, 2.1.1.298 J Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
PAKBJLMI_00432 3.7e-190 ywlC 2.7.7.87, 3.1.3.48 J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine
PAKBJLMI_00433 4e-113 upp 2.4.2.9 F Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
PAKBJLMI_00434 1e-128 atpB C it plays a direct role in the translocation of protons across the membrane
PAKBJLMI_00435 6.6e-29 atpE C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
PAKBJLMI_00436 1.7e-50 atpF C Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
PAKBJLMI_00437 1.5e-92 atpH C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
PAKBJLMI_00438 2.2e-282 atpA 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
PAKBJLMI_00439 9.8e-172 atpG C Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
PAKBJLMI_00440 2.1e-255 atpD 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
PAKBJLMI_00441 6.9e-64 atpC C Produces ATP from ADP in the presence of a proton gradient across the membrane
PAKBJLMI_00442 2.6e-30 ywzB S Protein of unknown function (DUF1146)
PAKBJLMI_00443 1.9e-178 mbl D Cell shape determining protein MreB Mrl
PAKBJLMI_00444 2.5e-49 yidD S Could be involved in insertion of integral membrane proteins into the membrane
PAKBJLMI_00445 1.5e-33 S Protein of unknown function (DUF2969)
PAKBJLMI_00446 9.5e-217 rodA D Belongs to the SEDS family
PAKBJLMI_00447 5.8e-77 uspA T universal stress protein
PAKBJLMI_00448 4e-33
PAKBJLMI_00449 4.2e-242 rarA L recombination factor protein RarA
PAKBJLMI_00450 1.9e-83 yueI S Protein of unknown function (DUF1694)
PAKBJLMI_00451 1e-110 rpsD J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
PAKBJLMI_00452 1.5e-292 ezrA D modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
PAKBJLMI_00453 1.1e-217 iscS2 2.8.1.7 E Aminotransferase class V
PAKBJLMI_00454 5.9e-230 thiI 2.8.1.4 H Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
PAKBJLMI_00455 2.2e-128 rsuA 5.4.99.19, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
PAKBJLMI_00456 0.0 valS 6.1.1.9 J amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
PAKBJLMI_00457 6.3e-205 folC 6.3.2.12, 6.3.2.17 H Belongs to the folylpolyglutamate synthase family
PAKBJLMI_00458 8.9e-127 S Haloacid dehalogenase-like hydrolase
PAKBJLMI_00459 1.2e-114 radC L DNA repair protein
PAKBJLMI_00460 1.1e-176 mreB D cell shape determining protein MreB
PAKBJLMI_00461 7.2e-150 mreC M Involved in formation and maintenance of cell shape
PAKBJLMI_00462 7.1e-95 mreD
PAKBJLMI_00463 8.8e-10 S Protein of unknown function (DUF4044)
PAKBJLMI_00464 3.2e-53 S Protein of unknown function (DUF3397)
PAKBJLMI_00465 4e-72 mraZ K Belongs to the MraZ family
PAKBJLMI_00466 2.2e-176 rsmH 2.1.1.199 J Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
PAKBJLMI_00467 2.4e-54 ftsL D Cell division protein FtsL
PAKBJLMI_00468 0.0 ftsI 3.4.16.4 M Penicillin-binding Protein
PAKBJLMI_00469 2.1e-177 mraY 2.7.8.13 M First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
PAKBJLMI_00470 1.5e-261 murD 6.3.2.9 M Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
PAKBJLMI_00471 4e-209 murG 2.4.1.227, 6.3.2.8 GT28 M Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
PAKBJLMI_00472 1.2e-131 divIB D Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex
PAKBJLMI_00473 2.5e-245 ftsA D Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring
PAKBJLMI_00474 4.2e-245 ftsZ D Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
PAKBJLMI_00475 2.1e-73 sepF D Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
PAKBJLMI_00476 7.8e-29 yggT S YGGT family
PAKBJLMI_00477 6.7e-150 ylmH S S4 domain protein
PAKBJLMI_00478 1.9e-75 gpsB D DivIVA domain protein
PAKBJLMI_00479 0.0 ileS 6.1.1.5 J amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
PAKBJLMI_00480 2.1e-31 cspA K 'Cold-shock' DNA-binding domain
PAKBJLMI_00481 8.9e-104 nudF 3.6.1.13 L ADP-ribose pyrophosphatase
PAKBJLMI_00482 3.4e-28
PAKBJLMI_00483 5.9e-126 mtnN 3.2.2.9 E Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
PAKBJLMI_00484 9.8e-58 XK27_04120 S Putative amino acid metabolism
PAKBJLMI_00485 9.3e-222 mnmA 2.8.1.13 J Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
PAKBJLMI_00486 4.3e-126 pgm6 5.4.2.11, 5.4.2.12 G Phosphoglycerate mutase family
PAKBJLMI_00487 2e-103 S Repeat protein
PAKBJLMI_00488 0.0 recD2 3.1.11.5 L DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity
PAKBJLMI_00489 5e-290 L Nuclease-related domain
PAKBJLMI_00490 9.3e-183 ytlR 2.7.1.91 I Diacylglycerol kinase catalytic domain
PAKBJLMI_00491 0.0 rnjA J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
PAKBJLMI_00492 3.2e-33 ykzG S Belongs to the UPF0356 family
PAKBJLMI_00493 1.1e-101 def 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
PAKBJLMI_00494 0.0 typA T GTP-binding protein TypA
PAKBJLMI_00495 7.7e-211 ftsW D Belongs to the SEDS family
PAKBJLMI_00496 4.3e-53 ylbG S Uncharacterized protein conserved in bacteria (DUF2129)
PAKBJLMI_00497 4.6e-97 rsmD 2.1.1.171 L RNA methyltransferase, RsmD family
PAKBJLMI_00498 6.2e-82 coaD 2.7.7.3 H Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
PAKBJLMI_00499 7.6e-194 ylbL T Belongs to the peptidase S16 family
PAKBJLMI_00500 1.7e-72 comEA L Competence protein ComEA
PAKBJLMI_00501 0.0 comEC S Competence protein ComEC
PAKBJLMI_00502 8.8e-176 holA 2.7.7.7 L DNA polymerase III delta subunit
PAKBJLMI_00503 3e-35 rpsT J Binds directly to 16S ribosomal RNA
PAKBJLMI_00504 1.1e-40 rpsO J Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
PAKBJLMI_00505 0.0 rnjB J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
PAKBJLMI_00506 2.2e-151
PAKBJLMI_00507 2.5e-225 tuf J This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
PAKBJLMI_00508 3e-227 tig D Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
PAKBJLMI_00509 1.2e-233 clpX O ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
PAKBJLMI_00510 2e-106 engB D Necessary for normal cell division and for the maintenance of normal septation
PAKBJLMI_00511 8.9e-192 dapF 5.1.1.7 E Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
PAKBJLMI_00512 2.5e-258 lysC 2.7.2.4 E Belongs to the aspartokinase family
PAKBJLMI_00513 2.9e-251 lysA 4.1.1.19, 4.1.1.20 E Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
PAKBJLMI_00514 5.7e-76 dapD 2.3.1.117, 2.3.1.89 E Catalyzes the transfer of an acetyl group from acetyl- CoA to tetrahydrodipicolinate
PAKBJLMI_00515 2.8e-221 hipO 3.5.1.47 E Catalyzes the conversion of N-acetyl-diaminopimelate to diaminopimelate and acetate
PAKBJLMI_00516 3.7e-176 dapA 4.3.3.7 E Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
PAKBJLMI_00517 3.9e-142 dapB 1.17.1.8 E Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
PAKBJLMI_00518 5.3e-220 aspC 2.6.1.1 E Aminotransferase
PAKBJLMI_00519 2.3e-198 asd 1.2.1.11 E Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
PAKBJLMI_00520 9.2e-206 pbpX1 V Beta-lactamase
PAKBJLMI_00521 1.7e-46 I Protein of unknown function (DUF2974)
PAKBJLMI_00522 6.5e-243 I Protein of unknown function (DUF2974)
PAKBJLMI_00523 8.6e-41 C FMN_bind
PAKBJLMI_00524 1.6e-80
PAKBJLMI_00525 4.1e-286
PAKBJLMI_00526 5.2e-178 iunH 3.2.2.1 F inosine-uridine preferring nucleoside hydrolase
PAKBJLMI_00527 2.7e-16 adhC 1.1.1.90 C S-(hydroxymethyl)glutathione dehydrogenase activity
PAKBJLMI_00528 8.5e-145
PAKBJLMI_00529 2.7e-10
PAKBJLMI_00532 6.1e-19 alkD L DNA alkylation repair enzyme
PAKBJLMI_00533 1.5e-67 alkD L DNA alkylation repair enzyme
PAKBJLMI_00534 6e-39 S Transglycosylase associated protein
PAKBJLMI_00536 2.4e-294 celA 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
PAKBJLMI_00537 2.2e-128 K UTRA domain
PAKBJLMI_00538 4.5e-55 celA1 2.7.1.196, 2.7.1.205 G PTS system, Lactose/Cellobiose specific IIB subunit
PAKBJLMI_00539 6.7e-60 chbA 2.7.1.196, 2.7.1.205 G PTS system, Lactose Cellobiose specific IIA subunit
PAKBJLMI_00540 1.2e-80
PAKBJLMI_00541 4.4e-138 celD G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PAKBJLMI_00542 1.2e-70 S Domain of unknown function (DUF3284)
PAKBJLMI_00543 6.3e-303 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
PAKBJLMI_00544 4.7e-134 gmuR K UTRA
PAKBJLMI_00545 3.5e-41
PAKBJLMI_00546 2.4e-267 lacE G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PAKBJLMI_00547 9.5e-285 bglH 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
PAKBJLMI_00548 6.8e-156 ypbG 2.7.1.2 GK ROK family
PAKBJLMI_00549 1.6e-85 C Nitroreductase family
PAKBJLMI_00550 1.3e-108 S Domain of unknown function (DUF4767)
PAKBJLMI_00551 8.1e-246 eno 4.2.1.11 G Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
PAKBJLMI_00552 6.8e-153 yitS S Uncharacterised protein, DegV family COG1307
PAKBJLMI_00553 1.7e-99 3.6.1.27 I Acid phosphatase homologues
PAKBJLMI_00554 3.3e-191 cbh 3.5.1.24 M Linear amide C-N hydrolase, choloylglycine hydrolase family protein
PAKBJLMI_00556 4.3e-180 L Belongs to the 'phage' integrase family
PAKBJLMI_00557 2.4e-11
PAKBJLMI_00558 5.8e-83
PAKBJLMI_00560 1.2e-55 ansR 3.4.21.88 K Cro/C1-type HTH DNA-binding domain
PAKBJLMI_00561 4.4e-29 2.3.1.19 K Helix-turn-helix XRE-family like proteins
PAKBJLMI_00562 8.1e-252 yifK E Amino acid permease
PAKBJLMI_00563 6.1e-190 thyA 2.1.1.45 F Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
PAKBJLMI_00564 5.6e-94 folA 1.5.1.3 H Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
PAKBJLMI_00565 1.9e-70 aha1 P E1-E2 ATPase
PAKBJLMI_00566 0.0 aha1 P E1-E2 ATPase
PAKBJLMI_00567 5e-159 metQ1 P Belongs to the nlpA lipoprotein family
PAKBJLMI_00568 4.9e-157 metN P Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
PAKBJLMI_00569 7.6e-81 metI P ABC transporter permease
PAKBJLMI_00570 2e-266 fumC 4.2.1.2 C Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate
PAKBJLMI_00571 2e-266 frdC 1.3.5.4 C FAD binding domain
PAKBJLMI_00572 3.7e-232 M domain protein
PAKBJLMI_00573 2.6e-49 M domain protein
PAKBJLMI_00574 2.6e-169 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily. LDH family
PAKBJLMI_00575 1.2e-257 pepC 3.4.22.40 E Peptidase C1-like family
PAKBJLMI_00576 1.2e-274 P Sodium:sulfate symporter transmembrane region
PAKBJLMI_00577 1.1e-155 ydjP I Alpha/beta hydrolase family
PAKBJLMI_00578 8.2e-196 citC 6.2.1.22 H Acetylation of prosthetic group (2-(5''-phosphoribosyl)- 3'-dephosphocoenzyme-A) of the gamma subunit of citrate lyase
PAKBJLMI_00579 4.1e-44 citD C Covalent carrier of the coenzyme of citrate lyase
PAKBJLMI_00580 1.4e-167 citE 4.1.3.25, 4.1.3.34 G Belongs to the HpcH HpaI aldolase family
PAKBJLMI_00581 9.2e-289 citF 2.8.3.10 H Citrate (pro-3S)-lyase alpha chain
PAKBJLMI_00582 9.3e-72 yeaL S Protein of unknown function (DUF441)
PAKBJLMI_00583 3.3e-13
PAKBJLMI_00584 1.5e-127 cbiQ P cobalt transport
PAKBJLMI_00585 0.0 ykoD P ABC transporter, ATP-binding protein
PAKBJLMI_00586 7.4e-95 S UPF0397 protein
PAKBJLMI_00587 3.8e-63 S Domain of unknown function DUF1828
PAKBJLMI_00588 2.2e-54
PAKBJLMI_00589 3.4e-177 citR K Putative sugar-binding domain
PAKBJLMI_00590 5.5e-245 yjjP S Putative threonine/serine exporter
PAKBJLMI_00591 5.7e-84 ybaK S Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
PAKBJLMI_00592 1e-173 prmA J Ribosomal protein L11 methyltransferase
PAKBJLMI_00593 4e-49
PAKBJLMI_00594 0.0 relA 2.7.6.5 KT In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
PAKBJLMI_00595 1e-75 dtd J rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
PAKBJLMI_00596 1.2e-244 hisS 6.1.1.21 J histidyl-tRNA synthetase
PAKBJLMI_00597 0.0 aspS 6.1.1.12 J Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp)
PAKBJLMI_00598 2.5e-225 patA 2.6.1.1 E Aminotransferase
PAKBJLMI_00599 2.8e-224 coaBC 4.1.1.36, 6.3.2.5 H Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
PAKBJLMI_00600 3.5e-154 S reductase
PAKBJLMI_00601 1.6e-151 yxeH S hydrolase
PAKBJLMI_00602 3.1e-181 gyaR 1.1.1.26, 2.7.1.165 CH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PAKBJLMI_00603 3.9e-230 yfnA E Amino Acid
PAKBJLMI_00604 2.2e-108 dedA 3.1.3.1 S SNARE associated Golgi protein
PAKBJLMI_00605 0.0 uvrC L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
PAKBJLMI_00606 1.7e-243 obg S An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
PAKBJLMI_00607 1.8e-213 I Acyltransferase
PAKBJLMI_00608 2e-91 I Acyltransferase
PAKBJLMI_00609 2.1e-179 rnz 3.1.26.11 J Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA
PAKBJLMI_00610 7.2e-144 XK27_05435 1.1.1.100 S Belongs to the short-chain dehydrogenases reductases (SDR) family
PAKBJLMI_00611 5.1e-32 yrvD S Lipopolysaccharide assembly protein A domain
PAKBJLMI_00612 7.6e-28 rpmF J Belongs to the bacterial ribosomal protein bL32 family
PAKBJLMI_00613 0.0 cpdB 3.1.3.6, 3.1.4.16 F Belongs to the 5'-nucleotidase family
PAKBJLMI_00615 0.0 dnaE 2.7.7.7 L DNA polymerase
PAKBJLMI_00616 7.3e-183 pfkA 2.7.1.11 F Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis
PAKBJLMI_00617 0.0 pyk 2.7.1.40, 2.7.7.4 G Belongs to the pyruvate kinase family
PAKBJLMI_00618 5e-170 cvfB S S1 domain
PAKBJLMI_00619 1.6e-168 xerD D recombinase XerD
PAKBJLMI_00620 1.7e-60 ribT K COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
PAKBJLMI_00621 1.3e-131 scpA D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
PAKBJLMI_00622 3.2e-104 scpB D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
PAKBJLMI_00623 3.8e-128 rluB 5.4.99.19, 5.4.99.21, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
PAKBJLMI_00624 5.3e-14 U Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
PAKBJLMI_00625 2.4e-81 U Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
PAKBJLMI_00626 1.1e-46 M Lysin motif
PAKBJLMI_00627 8.4e-114 cmk 1.17.7.4, 2.5.1.19, 2.7.1.26, 2.7.4.25, 2.7.7.2, 6.3.2.1 F Belongs to the cytidylate kinase family. Type 1 subfamily
PAKBJLMI_00628 2.3e-202 rpsA 1.17.7.4 J Ribosomal protein S1
PAKBJLMI_00629 1.3e-246 der 1.1.1.399, 1.1.1.95 S GTPase that plays an essential role in the late steps of ribosome biogenesis
PAKBJLMI_00630 3.9e-41 hup L Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
PAKBJLMI_00631 2.1e-230 S Tetratricopeptide repeat protein
PAKBJLMI_00632 1.3e-162 ypjC S Uncharacterised 5xTM membrane BCR, YitT family COG1284
PAKBJLMI_00633 1.1e-223 cca 2.7.7.19, 2.7.7.72 J Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate
PAKBJLMI_00634 2.2e-106 hlyIII S protein, hemolysin III
PAKBJLMI_00635 3.6e-74 DegV S Uncharacterised protein, DegV family COG1307
PAKBJLMI_00636 2.1e-61 DegV S Uncharacterised protein, DegV family COG1307
PAKBJLMI_00637 2.7e-35 yozE S Belongs to the UPF0346 family
PAKBJLMI_00638 3.9e-282 yjcE P Sodium proton antiporter
PAKBJLMI_00639 1e-159 ylqF S Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
PAKBJLMI_00640 1.1e-133 rnhB 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
PAKBJLMI_00641 3.6e-157 dprA LU DNA protecting protein DprA
PAKBJLMI_00642 0.0 topA 5.99.1.2 L Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
PAKBJLMI_00643 1.8e-248 trmFO 2.1.1.74 J Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
PAKBJLMI_00644 7.3e-169 xerC D Phage integrase, N-terminal SAM-like domain
PAKBJLMI_00645 1.1e-89 hslV 3.4.25.2 O Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
PAKBJLMI_00646 1.7e-233 hslU O this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
PAKBJLMI_00647 2.7e-179 lacX 5.1.3.3 G Aldose 1-epimerase
PAKBJLMI_00648 1.5e-65
PAKBJLMI_00649 3.8e-232 pts13C G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PAKBJLMI_00650 3.2e-158 S Alpha/beta hydrolase of unknown function (DUF915)
PAKBJLMI_00651 1.4e-150 xerD L Phage integrase, N-terminal SAM-like domain
PAKBJLMI_00652 3.5e-67 crcB U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
PAKBJLMI_00653 1.1e-62 crcB U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
PAKBJLMI_00654 6.9e-275 pepV 3.5.1.18 E dipeptidase PepV
PAKBJLMI_00655 5.3e-286 E Amino acid permease
PAKBJLMI_00656 0.0 yaaO 4.1.1.17, 4.1.1.19 E Orn/Lys/Arg decarboxylase, C-terminal domain
PAKBJLMI_00657 3.2e-247 ynbB 4.4.1.1 P aluminum resistance
PAKBJLMI_00658 3.9e-119 ktrA P domain protein
PAKBJLMI_00659 4e-240 ktrB P Potassium uptake protein
PAKBJLMI_00660 0.0 recQ 3.6.4.12 L ATP-dependent DNA helicase RecQ
PAKBJLMI_00661 1.7e-81 C Flavodoxin
PAKBJLMI_00662 0.0 uvrA3 L excinuclease ABC, A subunit
PAKBJLMI_00663 5.9e-182 mmuM 1.5.1.20, 2.1.1.10 H homocysteine S-methyltransferase
PAKBJLMI_00664 1.8e-113 3.6.1.27 I Acid phosphatase homologues
PAKBJLMI_00665 4.5e-67 yvbK 3.1.3.25 K COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
PAKBJLMI_00666 1.9e-208 pbpX1 V Beta-lactamase
PAKBJLMI_00667 1.5e-155 pdxK 2.7.1.35 H Phosphomethylpyrimidine kinase
PAKBJLMI_00668 3.1e-93 S ECF-type riboflavin transporter, S component
PAKBJLMI_00669 2.1e-216 S Putative peptidoglycan binding domain
PAKBJLMI_00670 6.5e-241
PAKBJLMI_00671 0.0 treB 2.7.1.208, 2.7.1.211 G phosphotransferase system
PAKBJLMI_00672 8.6e-128 treR K UTRA
PAKBJLMI_00673 0.0 treC 3.2.1.93 GH13 G Alpha amylase, catalytic domain protein
PAKBJLMI_00674 1.8e-80 M Glycosyl transferases group 1
PAKBJLMI_00675 3.8e-99 UW LPXTG-motif cell wall anchor domain protein
PAKBJLMI_00676 2.4e-164 M domain protein
PAKBJLMI_00677 2.6e-21 atl 3.2.1.96, 3.5.1.28 GH73 UW LPXTG-motif cell wall anchor domain protein
PAKBJLMI_00678 0.0 UW LPXTG-motif cell wall anchor domain protein
PAKBJLMI_00679 0.0 UW LPXTG-motif cell wall anchor domain protein
PAKBJLMI_00680 1.2e-28 K bacterial-type RNA polymerase transcription factor activity, metal ion regulated sequence-specific DNA binding
PAKBJLMI_00681 8.8e-164 rocF 3.5.3.1, 3.5.3.11 E Arginase family
PAKBJLMI_00682 2.1e-114 ylbE GM NAD dependent epimerase dehydratase family protein
PAKBJLMI_00683 6.6e-159 K Transcriptional regulator
PAKBJLMI_00684 2.9e-167 S Oxidoreductase, aldo keto reductase family protein
PAKBJLMI_00685 4.3e-166 akr5f 1.1.1.346 S reductase
PAKBJLMI_00686 2.7e-165 yvgN C Aldo keto reductase
PAKBJLMI_00687 4.1e-217 S SLAP domain
PAKBJLMI_00688 4.1e-103 yyaR K Acetyltransferase (GNAT) domain
PAKBJLMI_00691 6.8e-104
PAKBJLMI_00692 6.8e-78 K Transcriptional regulator
PAKBJLMI_00693 1.9e-245 brnQ U Component of the transport system for branched-chain amino acids
PAKBJLMI_00694 3e-164 S reductase
PAKBJLMI_00695 1.3e-170
PAKBJLMI_00696 4.2e-33 K Transcriptional regulator
PAKBJLMI_00697 9.3e-113 papP P ABC transporter, permease protein
PAKBJLMI_00698 2.2e-77 P ABC transporter permease
PAKBJLMI_00699 3.5e-137 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
PAKBJLMI_00700 7.7e-160 cjaA ET ABC transporter substrate-binding protein
PAKBJLMI_00701 8.3e-90 tpx 1.11.1.15 O Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
PAKBJLMI_00702 8.7e-110 5.4.2.11 G Phosphoglycerate mutase family
PAKBJLMI_00703 3.4e-174 4.1.1.45 S Amidohydrolase
PAKBJLMI_00704 1.1e-29
PAKBJLMI_00705 2.5e-109
PAKBJLMI_00706 4.9e-108
PAKBJLMI_00707 1.3e-130 yfeJ 6.3.5.2 F glutamine amidotransferase
PAKBJLMI_00708 2.3e-215 ynfM EGP Major facilitator Superfamily
PAKBJLMI_00709 1e-153 K Bacterial regulatory helix-turn-helix protein, lysR family
PAKBJLMI_00710 8.2e-119 3.6.1.55 F NUDIX domain
PAKBJLMI_00711 1.3e-76
PAKBJLMI_00712 3.6e-87 FG HIT domain
PAKBJLMI_00713 1.1e-62
PAKBJLMI_00714 3.7e-93 rimL J Acetyltransferase (GNAT) domain
PAKBJLMI_00715 1.1e-101 S Alpha/beta hydrolase family
PAKBJLMI_00716 9.7e-101
PAKBJLMI_00717 1.3e-71
PAKBJLMI_00718 1.5e-146 2.4.2.3 F Phosphorylase superfamily
PAKBJLMI_00719 6.2e-108 5.4.2.11 G Phosphoglycerate mutase family
PAKBJLMI_00720 5.1e-147 2.4.2.3 F Phosphorylase superfamily
PAKBJLMI_00721 6e-85 2.4.2.3 F Phosphorylase superfamily
PAKBJLMI_00722 1.8e-50 2.4.2.3 F Phosphorylase superfamily
PAKBJLMI_00723 1.4e-112 yihX 3.1.3.10, 3.8.1.2 S Haloacid dehalogenase-like hydrolase
PAKBJLMI_00724 7.2e-36
PAKBJLMI_00725 8.3e-53 mleP S Sodium Bile acid symporter family
PAKBJLMI_00726 1.5e-91
PAKBJLMI_00727 1.3e-38
PAKBJLMI_00728 1.8e-167 mleR K LysR family
PAKBJLMI_00729 0.0 sfcA 1.1.1.38, 4.1.1.101 C Malic enzyme
PAKBJLMI_00730 1.9e-101 ltrA S Bacterial low temperature requirement A protein (LtrA)
PAKBJLMI_00731 4.4e-244 yrvN L AAA C-terminal domain
PAKBJLMI_00732 2.9e-195 cbh 3.5.1.24 M Linear amide C-N hydrolase, choloylglycine hydrolase family protein
PAKBJLMI_00733 7.7e-114 S L,D-transpeptidase catalytic domain
PAKBJLMI_00734 4.7e-218 2.1.1.14 E methionine synthase, vitamin-B12 independent
PAKBJLMI_00735 2.3e-89 luxS 4.4.1.21 H Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
PAKBJLMI_00736 7.9e-67 L nuclease
PAKBJLMI_00737 3.3e-155 F DNA/RNA non-specific endonuclease
PAKBJLMI_00738 4.3e-115 ywnB S NAD(P)H-binding
PAKBJLMI_00739 1.7e-238 steT E amino acid
PAKBJLMI_00740 4.4e-106 mccA 2.5.1.134, 2.5.1.47 E Belongs to the cysteine synthase cystathionine beta- synthase family
PAKBJLMI_00741 2.4e-40 metC 4.4.1.1, 4.4.1.2, 4.4.1.8 E cystathionine
PAKBJLMI_00742 2.2e-148 metC 4.4.1.1, 4.4.1.2, 4.4.1.8 E cystathionine
PAKBJLMI_00743 0.0 ppc 4.1.1.31 C phosphoenolpyruvate carboxylase activity
PAKBJLMI_00744 0.0
PAKBJLMI_00745 0.0
PAKBJLMI_00746 3.5e-174 yobV1 K WYL domain
PAKBJLMI_00747 3.1e-83 XK26_02160 S Pyridoxamine 5'-phosphate oxidase
PAKBJLMI_00748 2.6e-146 IQ reductase
PAKBJLMI_00749 7.1e-55 ywnH 2.3.1.183 M Acetyltransferase (GNAT) domain
PAKBJLMI_00750 7.2e-115 tas C Aldo/keto reductase family
PAKBJLMI_00751 2.9e-60 C aldo keto reductase
PAKBJLMI_00752 3.6e-146 glcU U ribose uptake protein RbsU
PAKBJLMI_00753 1e-20 C Flavodoxin
PAKBJLMI_00755 2.7e-98 fldA C Flavodoxin
PAKBJLMI_00756 7.7e-100 P esterase
PAKBJLMI_00757 2.4e-261 gor 1.8.1.7 C Glutathione reductase
PAKBJLMI_00758 4.1e-23
PAKBJLMI_00759 4.2e-141 fldA C Flavodoxin
PAKBJLMI_00760 7.8e-97 S LexA-binding, inner membrane-associated putative hydrolase
PAKBJLMI_00761 2.3e-14 C Flavodoxin
PAKBJLMI_00762 2.6e-149 P FAD-binding domain
PAKBJLMI_00763 3.3e-77 adh 1.1.1.1, 1.1.1.14 E alcohol dehydrogenase
PAKBJLMI_00765 3e-251 yagE E amino acid
PAKBJLMI_00766 1.3e-12 S Alpha beta hydrolase
PAKBJLMI_00767 5e-44 proC 1.5.1.2 E Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
PAKBJLMI_00768 9.2e-17 proC 1.5.1.2 E Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
PAKBJLMI_00769 2.2e-18 magIII L Base excision DNA repair protein, HhH-GPD family
PAKBJLMI_00770 1.9e-168 MA20_14895 S Conserved hypothetical protein 698
PAKBJLMI_00771 7e-101
PAKBJLMI_00772 1.3e-108 plsY 2.3.1.15, 3.5.1.104 I Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
PAKBJLMI_00773 0.0 parE 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
PAKBJLMI_00774 0.0 parC 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
PAKBJLMI_00775 6.6e-184 K Transcriptional regulator
PAKBJLMI_00776 2.3e-173 ppaC 3.6.1.1 C inorganic pyrophosphatase
PAKBJLMI_00777 1.7e-113 ppiB 5.2.1.8 G PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
PAKBJLMI_00778 1.2e-39 K Helix-turn-helix domain
PAKBJLMI_00779 1.1e-127 yoaK S Protein of unknown function (DUF1275)
PAKBJLMI_00780 8.2e-66 fic D Fic/DOC family
PAKBJLMI_00782 1.5e-286 V ABC-type multidrug transport system, ATPase and permease components
PAKBJLMI_00783 2.3e-287 V ABC-type multidrug transport system, ATPase and permease components
PAKBJLMI_00784 1e-213 EGP Transmembrane secretion effector
PAKBJLMI_00785 3.9e-84 K transcriptional
PAKBJLMI_00786 3.3e-58 azoR C Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
PAKBJLMI_00788 4.3e-200 M Glycosyl hydrolases family 25
PAKBJLMI_00789 2.4e-107 XK27_00160 S Domain of unknown function (DUF5052)
PAKBJLMI_00790 1.5e-91 adk 2.7.4.3 F topology modulation protein
PAKBJLMI_00791 3.1e-59
PAKBJLMI_00792 8.4e-196 xerS L Belongs to the 'phage' integrase family
PAKBJLMI_00793 2e-55 degV S EDD domain protein, DegV family
PAKBJLMI_00794 2.3e-81 degV S EDD domain protein, DegV family
PAKBJLMI_00795 9e-66
PAKBJLMI_00796 0.0 FbpA K Fibronectin-binding protein
PAKBJLMI_00797 0.0 carB1 6.3.5.5 F Carbamoyl-phosphate synthase
PAKBJLMI_00798 3e-198 carA 6.3.5.5 F Carbamoyl-phosphate synthetase glutamine chain
PAKBJLMI_00799 3.2e-172 rluD 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
PAKBJLMI_00800 3.6e-79 lspA 3.4.23.36 MU This protein specifically catalyzes the removal of signal peptides from prolipoproteins
PAKBJLMI_00801 0.0 fhs 6.3.4.3 F Belongs to the formate--tetrahydrofolate ligase family
PAKBJLMI_00802 7.2e-244 cpdA S Calcineurin-like phosphoesterase
PAKBJLMI_00803 1.8e-217 rlmL 2.1.1.173, 2.1.1.264 L Belongs to the methyltransferase superfamily
PAKBJLMI_00804 6.7e-69 gpsB D Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation
PAKBJLMI_00805 9.4e-106 ypsA S Belongs to the UPF0398 family
PAKBJLMI_00806 7.8e-117 recU L Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation
PAKBJLMI_00807 0.0 ponA 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein 1A
PAKBJLMI_00808 1.5e-115 nth 4.2.99.18 L DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
PAKBJLMI_00809 5.7e-115 dnaD L DnaD domain protein
PAKBJLMI_00810 2.4e-253 asnS 6.1.1.22 J Asparaginyl-tRNA synthetase
PAKBJLMI_00811 1.4e-89 ypmB S Protein conserved in bacteria
PAKBJLMI_00812 8.5e-229 dinG 2.7.7.7, 3.6.4.12 L helicase involved in DNA repair and perhaps also replication
PAKBJLMI_00813 2.2e-301 dinG 2.7.7.7, 3.6.4.12 L helicase involved in DNA repair and perhaps also replication
PAKBJLMI_00814 0.0 addA 3.6.4.12 L ATP-dependent helicase nuclease subunit A
PAKBJLMI_00815 0.0 rexB 3.1.21.3, 3.6.4.12 L The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination. This subunit has 5' - 3' nuclease activity
PAKBJLMI_00816 6.6e-170 mvk 1.1.1.88, 2.3.3.10, 2.7.1.36 I GHMP kinases N terminal domain
PAKBJLMI_00817 4.1e-178 mvaD 4.1.1.33 I diphosphomevalonate decarboxylase
PAKBJLMI_00818 8.4e-204 mvaK2 2.7.1.36, 2.7.1.43, 2.7.4.2 I phosphomevalonate kinase
PAKBJLMI_00819 4.2e-189 fni 1.1.1.88, 5.3.3.2 C Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP)
PAKBJLMI_00820 5.2e-145 K SIS domain
PAKBJLMI_00821 3.2e-83 rpiA 5.3.1.6 G Ribose 5-phosphate isomerase A (phosphoriboisomerase A)
PAKBJLMI_00822 1.3e-107 XK27_10475 S Oxidoreductase family, NAD-binding Rossmann fold
PAKBJLMI_00823 4.4e-55 XK27_10475 S Oxidoreductase family, NAD-binding Rossmann fold
PAKBJLMI_00824 4.6e-216 iscS 2.8.1.7 E Aminotransferase class V
PAKBJLMI_00825 1.1e-267 rsmF 2.1.1.176 J NOL1 NOP2 sun family protein
PAKBJLMI_00826 3.8e-179
PAKBJLMI_00827 4.1e-141
PAKBJLMI_00828 8.9e-96 lepB 3.4.21.89 U Belongs to the peptidase S26 family
PAKBJLMI_00829 2.2e-27
PAKBJLMI_00830 6.8e-131
PAKBJLMI_00831 4e-145
PAKBJLMI_00832 3.9e-132
PAKBJLMI_00833 1.1e-122 skfE V ATPases associated with a variety of cellular activities
PAKBJLMI_00834 8e-61 yvoA_1 K Transcriptional regulator, GntR family
PAKBJLMI_00835 1.3e-245 pepT 3.4.11.4 E Cleaves the N-terminal amino acid of tripeptides
PAKBJLMI_00836 7.7e-154 yqfO 3.5.4.16 S Belongs to the GTP cyclohydrolase I type 2 NIF3 family
PAKBJLMI_00837 1.3e-125 trmK 2.1.1.217 S SAM-dependent methyltransferase
PAKBJLMI_00838 5.6e-82 mutT 3.6.1.55 F NUDIX domain
PAKBJLMI_00839 1.1e-126 S Peptidase family M23
PAKBJLMI_00840 1.4e-198 sigA K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
PAKBJLMI_00841 0.0 dnaG L RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
PAKBJLMI_00842 0.0 glyS 6.1.1.14 J Glycyl-tRNA synthetase beta subunit
PAKBJLMI_00843 2.3e-178 glyQ 6.1.1.14 J glycyl-tRNA synthetase alpha subunit
PAKBJLMI_00844 1.7e-134 recO L Involved in DNA repair and RecF pathway recombination
PAKBJLMI_00845 8.7e-170 era S An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
PAKBJLMI_00846 7.9e-99 ybeY 2.6.99.2, 3.5.4.5 S Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
PAKBJLMI_00847 1.3e-176 phoH T phosphate starvation-inducible protein PhoH
PAKBJLMI_00848 6.5e-70 yqeY S YqeY-like protein
PAKBJLMI_00849 2e-22 rpsU J Belongs to the bacterial ribosomal protein bS21 family
PAKBJLMI_00850 2e-152 yqfL 2.7.11.33, 2.7.4.28 F Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation dephosphorylation
PAKBJLMI_00851 1.3e-95 S Peptidase family M23
PAKBJLMI_00852 2.8e-110 msrA 1.8.4.11, 1.8.4.12 O Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
PAKBJLMI_00853 2.2e-162 yitT S Uncharacterised 5xTM membrane BCR, YitT family COG1284
PAKBJLMI_00854 4.8e-122
PAKBJLMI_00855 4.8e-162 thrB 2.7.1.39 F Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
PAKBJLMI_00856 1.3e-221 hom 1.1.1.3, 2.7.2.4 E homoserine dehydrogenase
PAKBJLMI_00857 6.4e-287 thrC 4.2.3.1 E Threonine synthase
PAKBJLMI_00858 9.4e-261 lysC 2.7.2.4 E Belongs to the aspartokinase family
PAKBJLMI_00859 0.0 oppA2 E Bacterial extracellular solute-binding proteins, family 5 Middle
PAKBJLMI_00860 1.1e-18 yjgN S Bacterial protein of unknown function (DUF898)
PAKBJLMI_00861 2.8e-103 lacA 2.3.1.79 S Transferase hexapeptide repeat
PAKBJLMI_00862 0.0
PAKBJLMI_00863 2e-10
PAKBJLMI_00864 4.5e-252 merA 1.16.1.1, 1.8.1.7 C Pyridine nucleotide-disulfide oxidoreductase
PAKBJLMI_00865 6.4e-201 brnQ U Component of the transport system for branched-chain amino acids
PAKBJLMI_00866 1.3e-295
PAKBJLMI_00867 1.1e-121 VY92_08690 5.3.1.32 G Antibiotic biosynthesis monooxygenase
PAKBJLMI_00868 1.3e-99
PAKBJLMI_00869 2.2e-108 K LysR substrate binding domain
PAKBJLMI_00870 3.7e-15
PAKBJLMI_00871 4.8e-229 S Sterol carrier protein domain
PAKBJLMI_00872 4.8e-99 citX 2.4.2.52, 2.7.7.61 HI Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase
PAKBJLMI_00873 3.2e-74 lysR5 K LysR substrate binding domain
PAKBJLMI_00874 4.9e-70 lysR5 K LysR substrate binding domain
PAKBJLMI_00875 6.1e-82 3.6.3.2, 3.6.3.6 P Cation transporter/ATPase, N-terminus
PAKBJLMI_00876 4.7e-311 3.6.3.2, 3.6.3.6 P Cation transporter/ATPase, N-terminus
PAKBJLMI_00877 1.8e-87 3.4.21.96 S SLAP domain
PAKBJLMI_00878 3.2e-286 cls I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
PAKBJLMI_00879 4.6e-151 metAA 2.3.1.46 E Transfers an acetyl group from acetyl-CoA to
PAKBJLMI_00880 1.6e-171 cysK 2.5.1.47 E Belongs to the cysteine synthase cystathionine beta- synthase family
PAKBJLMI_00881 1.1e-211 S Bacterial protein of unknown function (DUF871)
PAKBJLMI_00882 4.7e-151 citG 2.4.2.52, 2.7.7.61 H 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase
PAKBJLMI_00884 2.9e-78 K Acetyltransferase (GNAT) domain
PAKBJLMI_00885 3.7e-96 apt 2.4.2.22, 2.4.2.7 F Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
PAKBJLMI_00886 0.0 recJ L Single-stranded-DNA-specific exonuclease RecJ
PAKBJLMI_00887 4.8e-120 srtA 3.4.22.70 M sortase family
PAKBJLMI_00888 0.0 lepA M Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
PAKBJLMI_00889 7.8e-200 dnaJ O ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
PAKBJLMI_00890 0.0 dnaK O Heat shock 70 kDa protein
PAKBJLMI_00891 1.9e-77 grpE O Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
PAKBJLMI_00892 1.7e-193 hrcA K Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
PAKBJLMI_00893 2.5e-283 lsa S ABC transporter
PAKBJLMI_00894 5.2e-178 ribF 2.7.1.26, 2.7.7.2 H Belongs to the ribF family
PAKBJLMI_00895 1e-167 truB 5.4.99.25 J Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
PAKBJLMI_00896 3.3e-59 rbfA J One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
PAKBJLMI_00897 0.0 infB J One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
PAKBJLMI_00898 8.4e-48 rplGA J ribosomal protein
PAKBJLMI_00899 1.4e-47 ylxR K Protein of unknown function (DUF448)
PAKBJLMI_00900 3.3e-198 nusA K Participates in both transcription termination and antitermination
PAKBJLMI_00901 7.2e-83 rimP J Required for maturation of 30S ribosomal subunits
PAKBJLMI_00902 0.0 polC 2.7.7.7 L Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity
PAKBJLMI_00903 0.0 proS 6.1.1.15 J Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
PAKBJLMI_00904 2.6e-196 rseP 3.4.21.107, 3.4.21.116 M zinc metalloprotease
PAKBJLMI_00905 1.7e-145 cdsA 2.7.7.41 I Belongs to the CDS family
PAKBJLMI_00906 9.3e-138 uppS 2.5.1.31 H Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
PAKBJLMI_00907 8.7e-88 frr J Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
PAKBJLMI_00908 4.9e-131 pyrH 2.7.4.22 F Catalyzes the reversible phosphorylation of UMP to UDP
PAKBJLMI_00909 2.4e-184 tsf J Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
PAKBJLMI_00910 1.1e-141 rpsB J Belongs to the universal ribosomal protein uS2 family
PAKBJLMI_00911 1.3e-198 yabB 2.1.1.223 L Methyltransferase small domain
PAKBJLMI_00912 6.4e-116 plsC 2.3.1.51 I Acyltransferase
PAKBJLMI_00913 1e-231 cfa 2.1.1.317, 2.1.1.79 M cyclopropane-fatty-acyl-phospholipid synthase
PAKBJLMI_00914 0.0 pepO 3.4.24.71 O Peptidase family M13
PAKBJLMI_00915 3.6e-292 mdlB V ABC transporter
PAKBJLMI_00916 0.0 mdlA V ABC transporter
PAKBJLMI_00917 4.2e-30 yneF S Uncharacterised protein family (UPF0154)
PAKBJLMI_00918 1.1e-37 ynzC S UPF0291 protein
PAKBJLMI_00919 1.5e-112 lexA 3.4.21.88 K Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
PAKBJLMI_00920 3.1e-144 E GDSL-like Lipase/Acylhydrolase family
PAKBJLMI_00921 3.7e-122 ung2 3.2.2.27 L Uracil-DNA glycosylase
PAKBJLMI_00922 3.4e-177 yfdH 2.4.2.53 GT2 M Glycosyltransferase, group 2 family protein
PAKBJLMI_00923 8e-288 S Bacterial membrane protein, YfhO
PAKBJLMI_00924 1.1e-69 2.4.1.83 GT2 S GtrA-like protein
PAKBJLMI_00925 1.1e-56 rplS J This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
PAKBJLMI_00926 5e-128 trmD 2.1.1.228, 4.6.1.12 J Belongs to the RNA methyltransferase TrmD family
PAKBJLMI_00927 4.7e-96 rimM J An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
PAKBJLMI_00928 7.6e-45 rpsP J Belongs to the bacterial ribosomal protein bS16 family
PAKBJLMI_00929 2.9e-228 ffh 3.6.5.4 U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
PAKBJLMI_00930 1.6e-55 ylxM S Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
PAKBJLMI_00931 3.2e-259 yfnA E amino acid
PAKBJLMI_00932 2.8e-67
PAKBJLMI_00933 2.5e-288 pipD E Dipeptidase
PAKBJLMI_00934 2.1e-161 ftsY U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
PAKBJLMI_00935 0.0 smc D Required for chromosome condensation and partitioning
PAKBJLMI_00936 3.8e-125 rnc 3.1.26.3 J Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
PAKBJLMI_00937 1.2e-241 L COG2963 Transposase and inactivated derivatives
PAKBJLMI_00938 0.0 oppA E ABC transporter substrate-binding protein
PAKBJLMI_00939 0.0 oppA E ABC transporter substrate-binding protein
PAKBJLMI_00940 2.9e-144 oppC P Binding-protein-dependent transport system inner membrane component
PAKBJLMI_00941 2.5e-175 oppB P ABC transporter permease
PAKBJLMI_00942 6.1e-177 oppF P Belongs to the ABC transporter superfamily
PAKBJLMI_00943 2.5e-197 oppD P Belongs to the ABC transporter superfamily
PAKBJLMI_00944 5.7e-36 acpP IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis
PAKBJLMI_00945 3.7e-182 plsX 2.3.1.15 I Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA
PAKBJLMI_00946 0.0 recG 3.6.4.12 L Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
PAKBJLMI_00947 2.4e-306 yloV S DAK2 domain fusion protein YloV
PAKBJLMI_00948 6.8e-57 asp S Asp23 family, cell envelope-related function
PAKBJLMI_00949 3.7e-27 rpmB J Belongs to the bacterial ribosomal protein bL28 family
PAKBJLMI_00950 4.2e-52
PAKBJLMI_00951 6.9e-127 thiN 2.7.6.2 H thiamine pyrophosphokinase
PAKBJLMI_00952 4.5e-120 rpe 5.1.3.1 G Belongs to the ribulose-phosphate 3-epimerase family
PAKBJLMI_00953 8e-168 rsgA 3.1.3.100 S One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
PAKBJLMI_00954 0.0 KLT serine threonine protein kinase
PAKBJLMI_00955 2.3e-139 stp 3.1.3.16 T phosphatase
PAKBJLMI_00956 1.3e-246 sun 2.1.1.176 J Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
PAKBJLMI_00957 1.9e-172 fmt 2.1.2.9 J Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
PAKBJLMI_00958 0.0 priA L Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
PAKBJLMI_00959 1.1e-33 rpoZ 2.7.7.6 K Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
PAKBJLMI_00960 1.5e-112 gmk 2.7.4.8, 4.1.1.23 F Essential for recycling GMP and indirectly, cGMP
PAKBJLMI_00961 1.8e-80 6.3.3.2 S ASCH
PAKBJLMI_00962 4.7e-310 recN L May be involved in recombinational repair of damaged DNA
PAKBJLMI_00963 3.5e-154 rrmJ 2.1.1.226, 2.1.1.227 J Ribosomal RNA large subunit methyltransferase J
PAKBJLMI_00964 6e-160 ispA 2.5.1.1, 2.5.1.10, 2.5.1.29, 2.5.1.90 H Belongs to the FPP GGPP synthase family
PAKBJLMI_00965 3.4e-36 xseB 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
PAKBJLMI_00966 7.3e-213 xseA 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
PAKBJLMI_00967 1.9e-155 folD 1.5.1.5, 3.5.4.9 F Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
PAKBJLMI_00968 3.6e-64 nusB K Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
PAKBJLMI_00969 6.8e-72 yqhY S Asp23 family, cell envelope-related function
PAKBJLMI_00970 6.3e-102 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
PAKBJLMI_00971 3.2e-198 pepP 3.4.11.9, 3.4.13.9 E Creatinase/Prolidase N-terminal domain
PAKBJLMI_00972 1.7e-47 rpmA J Belongs to the bacterial ribosomal protein bL27 family
PAKBJLMI_00973 4.5e-49 rplU J This protein binds to 23S rRNA in the presence of protein L20
PAKBJLMI_00974 2e-149 S Uncharacterised 5xTM membrane BCR, YitT family COG1284
PAKBJLMI_00975 6.8e-259 S Uncharacterized protein conserved in bacteria (DUF2325)
PAKBJLMI_00976 1.8e-200 ilvE 2.6.1.42 E Branched-chain amino acid aminotransferase
PAKBJLMI_00977 2.1e-27 dmpI 5.3.2.6 G Belongs to the 4-oxalocrotonate tautomerase family
PAKBJLMI_00978 1.3e-105 Q Imidazolonepropionase and related amidohydrolases
PAKBJLMI_00979 3.2e-109 Q Imidazolonepropionase and related amidohydrolases
PAKBJLMI_00981 6.7e-60 oppA E ABC transporter
PAKBJLMI_00982 9.2e-98 E ABC transporter
PAKBJLMI_00983 3.7e-153 neo 2.7.1.87, 2.7.1.95 F Belongs to the aminoglycoside phosphotransferase family
PAKBJLMI_00984 5e-311 S Predicted membrane protein (DUF2207)
PAKBJLMI_00985 3.6e-154 cinI S Serine hydrolase (FSH1)
PAKBJLMI_00986 2e-185 M Glycosyl hydrolases family 25
PAKBJLMI_00988 1.7e-165 S Membrane
PAKBJLMI_00989 6.5e-178 I Carboxylesterase family
PAKBJLMI_00990 1e-65 arsC 1.20.4.1 P Belongs to the ArsC family
PAKBJLMI_00991 5.2e-295 V ABC-type multidrug transport system, ATPase and permease components
PAKBJLMI_00992 8.5e-290 V ABC-type multidrug transport system, ATPase and permease components
PAKBJLMI_00993 1.5e-152 S haloacid dehalogenase-like hydrolase
PAKBJLMI_00994 8.1e-253
PAKBJLMI_00995 0.0 lacA 3.2.1.23 G -beta-galactosidase
PAKBJLMI_00996 0.0 yic1 3.2.1.177 GH31 G Belongs to the glycosyl hydrolase 31 family
PAKBJLMI_00997 7.7e-309 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
PAKBJLMI_00998 1.1e-166 bglK 2.7.1.2, 2.7.1.85 GK ROK family
PAKBJLMI_00999 7.3e-206 xylR GK ROK family
PAKBJLMI_01000 1.1e-236 G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PAKBJLMI_01001 6.4e-100 S Bacterial PH domain
PAKBJLMI_01002 3.4e-16
PAKBJLMI_01003 4.2e-65 ps301 K sequence-specific DNA binding
PAKBJLMI_01004 2.3e-47 S Motility quorum-sensing regulator, toxin of MqsA
PAKBJLMI_01005 0.0 pepX 3.4.14.11 E Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline
PAKBJLMI_01006 8.1e-81 msrB 1.8.4.11, 1.8.4.12 O peptide methionine sulfoxide reductase
PAKBJLMI_01007 4.9e-47
PAKBJLMI_01008 6.6e-151 glcU U sugar transport
PAKBJLMI_01009 0.0
PAKBJLMI_01011 0.0 carB 6.3.5.5 F Carbamoyl-phosphate synthase
PAKBJLMI_01012 7.1e-211 carA 6.3.5.5 F Carbamoyl-phosphate synthetase glutamine chain
PAKBJLMI_01013 1e-150 pyrC 3.5.2.3 F Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
PAKBJLMI_01014 5.5e-55 pyrC 3.5.2.3 F Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
PAKBJLMI_01015 8.5e-184 pyrB 2.1.3.2 F Belongs to the ATCase OTCase family
PAKBJLMI_01016 1.4e-95 pyrR 2.4.2.9 F Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
PAKBJLMI_01017 3.3e-26 pyrD 1.3.1.14, 1.3.98.1 F Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
PAKBJLMI_01018 3.6e-129 pyrD 1.3.1.14, 1.3.98.1 F Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
PAKBJLMI_01019 1.5e-129 pyrF 4.1.1.23 F Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP)
PAKBJLMI_01020 9.2e-118 pyrE 2.4.2.10, 4.1.1.23 F Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
PAKBJLMI_01021 1.2e-117 GM NmrA-like family
PAKBJLMI_01022 0.0 3.6.3.8 P P-type ATPase
PAKBJLMI_01023 1.8e-248 clcA P chloride
PAKBJLMI_01024 5.2e-103 O Matrixin
PAKBJLMI_01025 0.0 UW LPXTG-motif cell wall anchor domain protein
PAKBJLMI_01026 8.8e-95 wecD K acetyltransferase
PAKBJLMI_01027 1e-50
PAKBJLMI_01028 1.5e-147 metQ2 P Belongs to the nlpA lipoprotein family
PAKBJLMI_01029 8.8e-47
PAKBJLMI_01030 8.1e-125 sdaAB 4.3.1.17 E Serine dehydratase beta chain
PAKBJLMI_01031 9e-156 sdaAA 4.3.1.17 E L-serine dehydratase, iron-sulfur-dependent, alpha subunit
PAKBJLMI_01032 5.7e-52 S Iron-sulfur cluster assembly protein
PAKBJLMI_01033 0.0 oppA E ABC transporter substrate-binding protein
PAKBJLMI_01035 9.1e-264 npr 1.11.1.1 C NADH oxidase
PAKBJLMI_01036 3.9e-62 yafQ S Bacterial toxin of type II toxin-antitoxin system, YafQ
PAKBJLMI_01037 4.6e-45 yefM 2.3.1.15 D Antitoxin component of a toxin-antitoxin (TA) module
PAKBJLMI_01038 1.5e-115 ylbE GM NAD(P)H-binding
PAKBJLMI_01039 1.7e-57 T PemK-like, MazF-like toxin of type II toxin-antitoxin system
PAKBJLMI_01040 2.6e-64 S ASCH domain
PAKBJLMI_01041 1.1e-118 S GyrI-like small molecule binding domain
PAKBJLMI_01043 7.7e-160 K Bacterial regulatory helix-turn-helix protein, lysR family
PAKBJLMI_01044 0.0 1.3.5.4 C FMN_bind
PAKBJLMI_01047 2e-208 2.7.7.65 T GGDEF domain
PAKBJLMI_01048 1e-130 yhjH 3.1.4.52 T Putative diguanylate phosphodiesterase
PAKBJLMI_01049 3.6e-143 T EAL domain
PAKBJLMI_01050 1.5e-46 pgaC GT2 M Glycosyl transferase
PAKBJLMI_01051 3.3e-183 pgaC GT2 M Glycosyl transferase
PAKBJLMI_01052 1e-90
PAKBJLMI_01053 5.7e-177 C Oxidoreductase
PAKBJLMI_01054 8.1e-09 L Probable transposase
PAKBJLMI_01055 9.3e-214 L TIGRFAM transposase, IS605 OrfB family
PAKBJLMI_01056 6e-27 C pentaerythritol trinitrate reductase activity
PAKBJLMI_01057 4e-109 pncA Q Isochorismatase family
PAKBJLMI_01058 2.9e-13
PAKBJLMI_01059 1.1e-278 yjeM E Amino Acid
PAKBJLMI_01060 2.4e-127 S Alpha beta hydrolase
PAKBJLMI_01062 2.4e-128
PAKBJLMI_01063 9e-127 dkgA 1.1.1.346 S L-ascorbic acid biosynthetic process
PAKBJLMI_01064 9.2e-71 O OsmC-like protein
PAKBJLMI_01065 1.8e-212 EGP Major facilitator Superfamily
PAKBJLMI_01066 3.5e-233 sptS 2.7.13.3 T Histidine kinase
PAKBJLMI_01067 1.5e-118 K response regulator
PAKBJLMI_01068 1.7e-113 2.7.6.5 T Region found in RelA / SpoT proteins
PAKBJLMI_01069 2.3e-187 dhaK 2.7.1.121, 2.7.1.28, 2.7.1.29, 4.6.1.15 G Dak1 domain
PAKBJLMI_01070 1.2e-103 dhaL 2.7.1.121 S Dak2
PAKBJLMI_01071 2.1e-61 dhaM 2.7.1.121 S PTS system fructose IIA component
PAKBJLMI_01072 5.6e-132 glpF U Belongs to the MIP aquaporin (TC 1.A.8) family
PAKBJLMI_01073 1.6e-282 gtfA 2.4.1.7 GH13 G Sucrose glucosyltransferase
PAKBJLMI_01074 0.0 rafA 3.2.1.22 G alpha-galactosidase
PAKBJLMI_01075 2.3e-209 msmX P Belongs to the ABC transporter superfamily
PAKBJLMI_01076 5.7e-152 msmG P Binding-protein-dependent transport system inner membrane component
PAKBJLMI_01077 1.8e-156 msmF P Binding-protein-dependent transport system inner membrane component
PAKBJLMI_01078 4e-242 msmE G Bacterial extracellular solute-binding protein
PAKBJLMI_01079 2.4e-158 msmR K helix_turn_helix, arabinose operon control protein
PAKBJLMI_01080 5e-75 merR K MerR HTH family regulatory protein
PAKBJLMI_01081 1.6e-266 lmrB EGP Major facilitator Superfamily
PAKBJLMI_01082 1.1e-96 S Domain of unknown function (DUF4811)
PAKBJLMI_01083 5.3e-52 S Domain of unknown function (DUF4160)
PAKBJLMI_01084 1.2e-45
PAKBJLMI_01086 1.1e-39 C FMN binding
PAKBJLMI_01087 1.8e-167 S SLAP domain
PAKBJLMI_01088 1.2e-193 galM 5.1.3.3 G Catalyzes the interconversion of alpha and beta anomers of maltose
PAKBJLMI_01089 4.3e-288 galT 2.7.7.12 G UDP-glucose--hexose-1-phosphate uridylyltransferase
PAKBJLMI_01090 1.3e-221 galK 2.7.1.6 F Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
PAKBJLMI_01091 2.3e-187 M domain protein
PAKBJLMI_01092 8.8e-113
PAKBJLMI_01093 0.0 lacZ 3.2.1.23 G -beta-galactosidase
PAKBJLMI_01094 0.0 lacS G Transporter
PAKBJLMI_01095 2.1e-224 L Putative transposase DNA-binding domain
PAKBJLMI_01096 1.2e-188 lacR K Transcriptional regulator
PAKBJLMI_01097 0.0 lacL 3.2.1.23 G Belongs to the glycosyl hydrolase 2 family
PAKBJLMI_01098 4.3e-188 lacM 3.2.1.23, 3.2.1.35, 3.2.1.51, 3.2.1.97 GH101,GH29 G beta-galactosidase
PAKBJLMI_01099 2e-191 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
PAKBJLMI_01100 4.7e-309 2.7.7.7 S Domain of unknown function (DUF5060)
PAKBJLMI_01101 1.3e-216 uhpT EGP Major facilitator Superfamily
PAKBJLMI_01102 2.1e-174 rbsR K helix_turn _helix lactose operon repressor
PAKBJLMI_01103 0.0 3.2.1.40 G Alpha-L-rhamnosidase N-terminal domain
PAKBJLMI_01104 2.6e-58 G polysaccharide catabolic process
PAKBJLMI_01105 1.2e-263 L COG2963 Transposase and inactivated derivatives
PAKBJLMI_01106 1e-78 G YdjC-like protein
PAKBJLMI_01107 7.3e-177 I alpha/beta hydrolase fold
PAKBJLMI_01108 0.0 2.7.1.208, 2.7.1.211 G phosphotransferase system
PAKBJLMI_01109 5.7e-155 licT K CAT RNA binding domain
PAKBJLMI_01110 2.4e-258 G Protein of unknown function (DUF4038)
PAKBJLMI_01111 5.7e-175 rbsB G Periplasmic binding protein domain
PAKBJLMI_01112 2e-147 rbsC U Belongs to the binding-protein-dependent transport system permease family
PAKBJLMI_01114 5.8e-258 rbsA 3.6.3.17 G ABC transporter
PAKBJLMI_01115 3.9e-66 rbsD 5.4.99.62 G Catalyzes the interconversion of beta-pyran and beta- furan forms of D-ribose
PAKBJLMI_01116 8e-163 rbsK 2.7.1.15 H Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
PAKBJLMI_01117 1.7e-289 G isomerase
PAKBJLMI_01118 5.1e-223 L Putative transposase DNA-binding domain
PAKBJLMI_01119 6e-188 purR13 K Bacterial regulatory proteins, lacI family
PAKBJLMI_01120 1.2e-154 2.2.1.1 G Transketolase, thiamine diphosphate binding domain
PAKBJLMI_01121 1.3e-176 tktA 2.2.1.1 G Transketolase, pyrimidine binding domain
PAKBJLMI_01123 3.6e-172 glpK_1 2.7.1.30 G FGGY family of carbohydrate kinases, C-terminal domain
PAKBJLMI_01124 8.1e-224 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
PAKBJLMI_01125 1.9e-248 lmrB EGP Major facilitator Superfamily
PAKBJLMI_01128 4.1e-152
PAKBJLMI_01129 4e-167
PAKBJLMI_01130 1.8e-116 ybbL S ABC transporter, ATP-binding protein
PAKBJLMI_01131 5.5e-133 ybbM S Uncharacterised protein family (UPF0014)
PAKBJLMI_01132 8.9e-264 glnA 6.3.1.2 E glutamine synthetase
PAKBJLMI_01133 2.3e-237 ynbB 4.4.1.1 P aluminum resistance
PAKBJLMI_01134 2.1e-171 miaA 2.5.1.75 F Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
PAKBJLMI_01135 3.3e-65 yqhL P Rhodanese-like protein
PAKBJLMI_01136 1.6e-32 yqgQ S Bacterial protein of unknown function (DUF910)
PAKBJLMI_01137 1.2e-118 gluP 3.4.21.105 S Rhomboid family
PAKBJLMI_01138 1.1e-98 ygfA 6.3.3.2 H Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
PAKBJLMI_01139 1.2e-20 rpmG J Belongs to the bacterial ribosomal protein bL33 family
PAKBJLMI_01140 0.0 pbp2b 3.4.16.4 M Penicillin-binding Protein
PAKBJLMI_01141 0.0 S membrane
PAKBJLMI_01142 2.3e-170 2.7.1.59 G BadF/BadG/BcrA/BcrD ATPase family
PAKBJLMI_01143 0.0 O Belongs to the peptidase S8 family
PAKBJLMI_01144 1.7e-35 ltrA S Bacterial low temperature requirement A protein (LtrA)
PAKBJLMI_01145 1.1e-12 ltrA S Bacterial low temperature requirement A protein (LtrA)
PAKBJLMI_01146 3.6e-254 pepT2 3.4.11.14, 3.4.11.4 E Cleaves the N-terminal amino acid of tripeptides
PAKBJLMI_01147 6.7e-170 ldh 1.1.1.27 C lactate/malate dehydrogenase, alpha/beta C-terminal domain
PAKBJLMI_01148 4.9e-63 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
PAKBJLMI_01149 0.0 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
PAKBJLMI_01150 1.2e-202 pheS 6.1.1.20 J Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
PAKBJLMI_01151 4.7e-63 yodB K Transcriptional regulator, HxlR family
PAKBJLMI_01152 1.9e-138 spoU 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
PAKBJLMI_01153 7.6e-45 acyP 3.6.1.7 C Belongs to the acylphosphatase family
PAKBJLMI_01154 4.3e-159 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
PAKBJLMI_01155 1.9e-249 arlS 2.7.13.3 T Histidine kinase
PAKBJLMI_01156 2.5e-127 K response regulator
PAKBJLMI_01157 4.1e-98 yceD S Uncharacterized ACR, COG1399
PAKBJLMI_01158 2.7e-216 ylbM S Belongs to the UPF0348 family
PAKBJLMI_01159 5.3e-59 rsfS J Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
PAKBJLMI_01160 1.4e-112 nadD 2.7.6.3, 2.7.7.18 H Hydrolase, HD family
PAKBJLMI_01161 5.2e-124 nadD 2.7.7.18, 3.6.1.55 H Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
PAKBJLMI_01162 1e-212 yqeH S Ribosome biogenesis GTPase YqeH
PAKBJLMI_01163 1.6e-93 yqeG S HAD phosphatase, family IIIA
PAKBJLMI_01164 1.9e-198 tnpB L Putative transposase DNA-binding domain
PAKBJLMI_01165 3.5e-188 add 3.5.4.4 F Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
PAKBJLMI_01166 1e-57 rplT J Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
PAKBJLMI_01167 2.1e-28 rpmI J Belongs to the bacterial ribosomal protein bL35 family
PAKBJLMI_01168 3.7e-73 infC J IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
PAKBJLMI_01169 3.2e-92
PAKBJLMI_01170 5.7e-71 S Protein of unknown function (DUF3021)
PAKBJLMI_01171 5.6e-74 K LytTr DNA-binding domain
PAKBJLMI_01172 0.0 thrS 6.1.1.3 J Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
PAKBJLMI_01173 6.9e-167 dnaI L Primosomal protein DnaI
PAKBJLMI_01174 1.7e-251 dnaB L Replication initiation and membrane attachment
PAKBJLMI_01175 2.7e-82 nrdR K Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
PAKBJLMI_01176 6.9e-107 coaE 2.7.1.24 F Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
PAKBJLMI_01177 4.8e-159 fpg 3.2.2.23, 4.2.99.18 L Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates
PAKBJLMI_01178 0.0 polA 2.7.7.7 L In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
PAKBJLMI_01179 5.3e-250 purD 6.3.4.13 F Belongs to the GARS family
PAKBJLMI_01180 5e-295 purH 2.1.2.3, 3.5.4.10 F Bifunctional purine biosynthesis protein PurH
PAKBJLMI_01181 2.7e-111 purN 2.1.2.2 F Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
PAKBJLMI_01182 2e-199 purM 6.3.3.1, 6.3.4.13 F Phosphoribosylformylglycinamidine cyclo-ligase
PAKBJLMI_01183 1.5e-277 purF 2.4.2.14 F Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
PAKBJLMI_01184 0.0 purL 6.3.5.3 F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
PAKBJLMI_01185 6.1e-128 purQ 6.3.5.3 F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
PAKBJLMI_01186 7.6e-39 purS 6.3.2.6, 6.3.5.3 F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
PAKBJLMI_01187 2.1e-134 purC 4.1.1.21, 4.3.2.2, 6.3.2.6 F Belongs to the SAICAR synthetase family
PAKBJLMI_01188 1.5e-70 purK 6.3.4.18 F Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
PAKBJLMI_01189 8.2e-126 purK 6.3.4.18 F Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
PAKBJLMI_01190 9.6e-83 purE 5.4.99.18 F Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
PAKBJLMI_01191 0.0 fhs 6.3.4.3 F Belongs to the formate--tetrahydrofolate ligase family
PAKBJLMI_01192 1.1e-124 darA C Flavodoxin
PAKBJLMI_01193 9.7e-142 qmcA O prohibitin homologues
PAKBJLMI_01194 1.1e-50 L RelB antitoxin
PAKBJLMI_01195 2.4e-194 S Bacteriocin helveticin-J
PAKBJLMI_01196 7.9e-293 M Peptidase family M1 domain
PAKBJLMI_01197 3.2e-178 S SLAP domain
PAKBJLMI_01198 1.2e-219 L Putative transposase DNA-binding domain
PAKBJLMI_01199 2.9e-238 mepA V MATE efflux family protein
PAKBJLMI_01200 6.6e-167 rocF 3.5.3.1, 3.5.3.11 E Arginase family
PAKBJLMI_01201 1.8e-92 S Membrane
PAKBJLMI_01202 3.1e-294 bglH 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
PAKBJLMI_01203 5.5e-295 G phosphotransferase system
PAKBJLMI_01204 1.2e-29 2.7.1.208, 2.7.1.211 G protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
PAKBJLMI_01205 1.7e-148 ybbH K Helix-turn-helix domain, rpiR family
PAKBJLMI_01206 0.0
PAKBJLMI_01207 4.8e-254 mpl 6.3.2.4, 6.3.2.45, 6.3.2.8 M Belongs to the MurCDEF family
PAKBJLMI_01208 7.4e-123 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
PAKBJLMI_01209 1.1e-53 ytpP 2.7.1.180, 5.3.4.1 CO Thioredoxin
PAKBJLMI_01210 1.5e-126 trmB 2.1.1.297, 2.1.1.33 J Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
PAKBJLMI_01211 7.4e-201 ecsB U ABC transporter
PAKBJLMI_01212 2e-135 ecsA V ABC transporter, ATP-binding protein
PAKBJLMI_01213 2.8e-78 hit FG Scavenger mRNA decapping enzyme C-term binding
PAKBJLMI_01214 1.4e-56
PAKBJLMI_01215 1.1e-148 prsA 5.2.1.8 M Plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins
PAKBJLMI_01216 8.4e-187 cbf S Metal dependent phosphohydrolases with conserved 'HD' motif.
PAKBJLMI_01217 0.0 L AAA domain
PAKBJLMI_01218 2.4e-231 yhaO L Ser Thr phosphatase family protein
PAKBJLMI_01219 6.8e-54 yheA S Belongs to the UPF0342 family
PAKBJLMI_01220 0.0 pbp2A 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein
PAKBJLMI_01221 2.5e-163 rluA 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
PAKBJLMI_01222 1.6e-140 glpF U Belongs to the MIP aquaporin (TC 1.A.8) family
PAKBJLMI_01223 6.8e-119
PAKBJLMI_01224 4.1e-192 5.3.3.2 C FMN-dependent dehydrogenase
PAKBJLMI_01225 2.3e-170 fba 4.1.2.13, 4.1.2.29 G Fructose-1,6-bisphosphate aldolase, class II
PAKBJLMI_01226 0.0 argS 6.1.1.19 J Arginyl-tRNA synthetase
PAKBJLMI_01227 6.9e-127 M ErfK YbiS YcfS YnhG
PAKBJLMI_01228 1.8e-153 nnrD 4.2.1.136, 5.1.99.6 H Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
PAKBJLMI_01229 1.7e-243 dacA 3.4.16.4 M Belongs to the peptidase S11 family
PAKBJLMI_01231 6.4e-54 pspC KT PspC domain
PAKBJLMI_01232 5.5e-197 V Beta-lactamase
PAKBJLMI_01233 3e-54 yvlA
PAKBJLMI_01234 7e-258 psd 4.1.1.65 I Belongs to the phosphatidylserine decarboxylase family
PAKBJLMI_01235 9.1e-40 S Enterocin A Immunity
PAKBJLMI_01236 7.5e-288 S domain, Protein
PAKBJLMI_01237 8.7e-73 S domain, Protein
PAKBJLMI_01238 3.8e-80 yphH S Cupin domain
PAKBJLMI_01239 0.0 sprD D Domain of Unknown Function (DUF1542)
PAKBJLMI_01240 2.8e-17 K transcriptional regulator
PAKBJLMI_01241 5.5e-71 K transcriptional regulator
PAKBJLMI_01242 4.8e-16
PAKBJLMI_01243 2.2e-296 ytgP S Polysaccharide biosynthesis protein
PAKBJLMI_01244 0.0 leuS 6.1.1.4 J Belongs to the class-I aminoacyl-tRNA synthetase family
PAKBJLMI_01245 3.9e-119 3.6.1.27 I Acid phosphatase homologues
PAKBJLMI_01246 4.4e-91 ndh 1.6.99.3 C NADH dehydrogenase
PAKBJLMI_01247 2.3e-116 ndh 1.6.99.3 C NADH dehydrogenase
PAKBJLMI_01248 1.5e-30 cydA 1.10.3.14 C ubiquinol oxidase
PAKBJLMI_01249 2.9e-260 qacA EGP Major facilitator Superfamily
PAKBJLMI_01250 2.4e-220 metK 2.5.1.6 H Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
PAKBJLMI_01255 1.8e-253 serS 6.1.1.11 J Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
PAKBJLMI_01256 1.4e-101 J Acetyltransferase (GNAT) domain
PAKBJLMI_01257 2.7e-111 yjbF S SNARE associated Golgi protein
PAKBJLMI_01258 3.2e-152 I alpha/beta hydrolase fold
PAKBJLMI_01259 4.5e-160 hipB K Helix-turn-helix
PAKBJLMI_01260 2.1e-93 F Nucleoside 2-deoxyribosyltransferase
PAKBJLMI_01261 2.1e-263 gabD 1.2.1.16, 1.2.1.20, 1.2.1.79 C Belongs to the aldehyde dehydrogenase family
PAKBJLMI_01262 0.0 fhaB M Rib/alpha-like repeat
PAKBJLMI_01263 0.0 fhaB M Rib/alpha-like repeat
PAKBJLMI_01264 2.4e-163
PAKBJLMI_01265 0.0 ydgH S MMPL family
PAKBJLMI_01266 2.3e-96 yobS K Bacterial regulatory proteins, tetR family
PAKBJLMI_01267 1.5e-148 3.5.2.6 V Beta-lactamase enzyme family
PAKBJLMI_01268 4e-154 corA P CorA-like Mg2+ transporter protein
PAKBJLMI_01269 1.3e-235 G Bacterial extracellular solute-binding protein
PAKBJLMI_01270 3.2e-258 YSH1 S Zn-dependent metallo-hydrolase RNA specificity domain
PAKBJLMI_01271 9.4e-147 gtsC P Binding-protein-dependent transport system inner membrane component
PAKBJLMI_01272 2.2e-154 gtsB P ABC-type sugar transport systems, permease components
PAKBJLMI_01273 7.1e-203 malK P ATPases associated with a variety of cellular activities
PAKBJLMI_01274 2.8e-284 pipD E Dipeptidase
PAKBJLMI_01275 1.6e-157 endA F DNA RNA non-specific endonuclease
PAKBJLMI_01276 1.9e-183 dnaQ 2.7.7.7 L EXOIII
PAKBJLMI_01277 1.4e-155 K NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
PAKBJLMI_01278 1.5e-115 yviA S Protein of unknown function (DUF421)
PAKBJLMI_01279 3.4e-74 S Protein of unknown function (DUF3290)
PAKBJLMI_01280 0.0 sdrF M domain protein
PAKBJLMI_01281 4.5e-140 pnuC H nicotinamide mononucleotide transporter
PAKBJLMI_01282 6.2e-264
PAKBJLMI_01283 3.5e-48
PAKBJLMI_01284 1.5e-143 S PAS domain
PAKBJLMI_01285 5.6e-89 V ABC transporter transmembrane region
PAKBJLMI_01286 3.9e-196 V ABC transporter transmembrane region
PAKBJLMI_01287 1.4e-180 pip 3.4.11.5 E Releases the N-terminal proline from various substrates
PAKBJLMI_01288 1.8e-127 T Transcriptional regulatory protein, C terminal
PAKBJLMI_01289 1.1e-243 T GHKL domain
PAKBJLMI_01290 2.1e-86 S Peptidase propeptide and YPEB domain
PAKBJLMI_01291 2.3e-97 S Peptidase propeptide and YPEB domain
PAKBJLMI_01292 2.8e-76 yybA 2.3.1.57 K Transcriptional regulator
PAKBJLMI_01293 6.8e-95 paiA 2.3.1.57 K Acetyltransferase (GNAT) domain
PAKBJLMI_01294 0.0 E ABC transporter, substratebinding protein
PAKBJLMI_01295 1.1e-54 ypaA S Protein of unknown function (DUF1304)
PAKBJLMI_01296 4.6e-100 S Peptidase propeptide and YPEB domain
PAKBJLMI_01297 9.9e-103 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
PAKBJLMI_01298 3.5e-171 coaA 2.7.1.33 F Pantothenic acid kinase
PAKBJLMI_01299 6.7e-104 E GDSL-like Lipase/Acylhydrolase
PAKBJLMI_01300 9.9e-82 yjcF S Acetyltransferase (GNAT) domain
PAKBJLMI_01301 2.8e-151 aatB ET ABC transporter substrate-binding protein
PAKBJLMI_01302 9e-110 glnQ 3.6.3.21 E ABC transporter
PAKBJLMI_01303 3e-108 glnP P ABC transporter permease
PAKBJLMI_01304 0.0 helD 3.6.4.12 L DNA helicase
PAKBJLMI_01305 9.9e-126 XK27_08875 O PFAM peptidase M10A and M12B, matrixin and adamalysin
PAKBJLMI_01306 8.5e-127 pgm3 5.4.2.11 G Phosphoglycerate mutase family
PAKBJLMI_01307 0.0 V FtsX-like permease family
PAKBJLMI_01308 1.7e-134 cysA V ABC transporter, ATP-binding protein
PAKBJLMI_01309 1.6e-241 S response to antibiotic
PAKBJLMI_01310 8.4e-20
PAKBJLMI_01311 1.3e-38
PAKBJLMI_01312 0.0 3.6.3.8 P P-type ATPase
PAKBJLMI_01313 2.1e-64 2.7.1.191 G PTS system fructose IIA component
PAKBJLMI_01314 2.1e-48
PAKBJLMI_01315 1.9e-15
PAKBJLMI_01316 4.2e-186 ansA 3.5.1.1 EJ L-asparaginase, type I
PAKBJLMI_01317 1.5e-138 glvR K Helix-turn-helix domain, rpiR family
PAKBJLMI_01318 4.1e-269 aglB 3.2.1.122, 3.2.1.86 GH4,GT4 G Family 4 glycosyl hydrolase C-terminal domain
PAKBJLMI_01319 4.3e-155
PAKBJLMI_01320 3.4e-91
PAKBJLMI_01321 4.2e-106 3.2.2.20 K acetyltransferase
PAKBJLMI_01324 4.4e-311 asdA 4.1.1.12 E Aminotransferase
PAKBJLMI_01325 3.2e-303 aspT P Predicted Permease Membrane Region
PAKBJLMI_01326 4.2e-189 S Domain of unknown function (DUF4767)
PAKBJLMI_01327 2.5e-184 S Membrane
PAKBJLMI_01328 6.4e-150 xth 3.1.11.2 L exodeoxyribonuclease III
PAKBJLMI_01329 7.9e-188 K helix_turn_helix, arabinose operon control protein
PAKBJLMI_01330 7.8e-188 K helix_turn_helix, arabinose operon control protein
PAKBJLMI_01331 4.7e-149 K Helix-turn-helix domain, rpiR family
PAKBJLMI_01332 9.6e-106 yleB 4.2.1.126 S Bacterial protein of unknown function (DUF871)
PAKBJLMI_01333 5.3e-84 yleB 4.2.1.126 S Bacterial protein of unknown function (DUF871)
PAKBJLMI_01334 3.7e-157 murQ 4.2.1.126 G Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
PAKBJLMI_01335 0.0 sacX 2.7.1.208, 2.7.1.211 G phosphotransferase system
PAKBJLMI_01336 1.6e-298 arbB 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
PAKBJLMI_01337 0.0 2.7.1.208, 2.7.1.211 G phosphotransferase system
PAKBJLMI_01338 2.5e-158 K CAT RNA binding domain
PAKBJLMI_01339 0.0 M Leucine-rich repeat (LRR) protein
PAKBJLMI_01340 0.0 pulA 3.2.1.41 CBM48,GH13 G belongs to the glycosyl hydrolase 13 family
PAKBJLMI_01341 1.2e-91
PAKBJLMI_01342 1.6e-182
PAKBJLMI_01343 1.1e-119 S Uncharacterised protein conserved in bacteria (DUF2326)
PAKBJLMI_01344 1.4e-142 S Uncharacterised protein conserved in bacteria (DUF2326)
PAKBJLMI_01345 7.6e-10
PAKBJLMI_01351 2.2e-165 galU 2.7.7.9 M UTP-glucose-1-phosphate uridylyltransferase
PAKBJLMI_01352 4.1e-217 mnaA 5.1.3.14 G Belongs to the UDP-N-acetylglucosamine 2-epimerase family
PAKBJLMI_01353 2.3e-63 L PFAM Integrase catalytic region
PAKBJLMI_01354 1e-136 L transposase activity
PAKBJLMI_01355 5.2e-234 L COG3547 Transposase and inactivated derivatives
PAKBJLMI_01356 4.6e-266 cps1C S Membrane protein involved in the export of O-antigen and teichoic acid
PAKBJLMI_01357 1.2e-200 glf 5.4.99.9 M UDP-galactopyranose mutase
PAKBJLMI_01358 4.2e-218 S Psort location CytoplasmicMembrane, score 9.99
PAKBJLMI_01359 1.2e-188 M Glycosyltransferase like family 2
PAKBJLMI_01360 5.7e-118 M transferase activity, transferring glycosyl groups
PAKBJLMI_01361 2.8e-165 glfT1 1.1.1.133 S Glycosyltransferase like family 2
PAKBJLMI_01362 1.6e-148 cps1D M Domain of unknown function (DUF4422)
PAKBJLMI_01363 1.1e-123 rfbP M Bacterial sugar transferase
PAKBJLMI_01364 1.8e-147 ywqE 3.1.3.48 GM PHP domain protein
PAKBJLMI_01365 9.6e-125 ywqD 2.7.10.1 D Capsular exopolysaccharide family
PAKBJLMI_01366 1.6e-141 epsB M biosynthesis protein
PAKBJLMI_01367 4e-174 brpA K Cell envelope-like function transcriptional attenuator common domain protein
PAKBJLMI_01368 4e-205 hflX S GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
PAKBJLMI_01369 3.2e-189 S Cysteine-rich secretory protein family
PAKBJLMI_01370 0.0 2.7.13.3 M Mycoplasma protein of unknown function, DUF285
PAKBJLMI_01371 3.7e-128 M NlpC/P60 family
PAKBJLMI_01372 2.3e-126 M NlpC P60 family protein
PAKBJLMI_01373 7.6e-84 M NlpC/P60 family
PAKBJLMI_01374 1.8e-85 gmk2 2.7.4.8 F Guanylate kinase homologues.
PAKBJLMI_01375 5.6e-33
PAKBJLMI_01376 1e-279 S O-antigen ligase like membrane protein
PAKBJLMI_01377 8.1e-111
PAKBJLMI_01378 3.8e-78 nrdI F NrdI Flavodoxin like
PAKBJLMI_01379 1.7e-181 nrdF 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
PAKBJLMI_01380 7.8e-78
PAKBJLMI_01381 7.7e-137 yvpB S Peptidase_C39 like family
PAKBJLMI_01382 5.2e-53 yitW S Iron-sulfur cluster assembly protein
PAKBJLMI_01383 8.8e-47 sufB O assembly protein SufB
PAKBJLMI_01384 4.6e-35 sufC O FeS assembly ATPase SufC
PAKBJLMI_01385 7.8e-85 S Threonine/Serine exporter, ThrE
PAKBJLMI_01386 1.7e-137 thrE S Putative threonine/serine exporter
PAKBJLMI_01387 2.1e-293 S ABC transporter
PAKBJLMI_01388 3.6e-61
PAKBJLMI_01389 1.3e-45 rimL J Acetyltransferase (GNAT) domain
PAKBJLMI_01390 1.5e-223 brpA K Cell envelope-like function transcriptional attenuator common domain protein
PAKBJLMI_01391 0.0 pepF E oligoendopeptidase F
PAKBJLMI_01392 6.7e-44 P transmembrane transport
PAKBJLMI_01393 7e-265 lctP C L-lactate permease
PAKBJLMI_01394 1.4e-62 pdxH S Pyridoxamine 5'-phosphate oxidase
PAKBJLMI_01395 7.9e-135 znuB U ABC 3 transport family
PAKBJLMI_01396 1e-116 fhuC P ABC transporter
PAKBJLMI_01397 6.4e-165 psaA P Belongs to the bacterial solute-binding protein 9 family
PAKBJLMI_01398 2.5e-43 K helix_turn_helix, Arsenical Resistance Operon Repressor
PAKBJLMI_01399 5.1e-75 K LytTr DNA-binding domain
PAKBJLMI_01400 5.5e-47 S Protein of unknown function (DUF3021)
PAKBJLMI_01401 0.0 fruA 2.7.1.202, 2.7.1.204 GT Phosphotransferase System
PAKBJLMI_01402 3.3e-169 pfkB 2.7.1.11, 2.7.1.56 H Belongs to the carbohydrate kinase PfkB family. LacC subfamily
PAKBJLMI_01403 5.2e-136 fruR K DeoR C terminal sensor domain
PAKBJLMI_01404 6.3e-196 fic S Fic/DOC family
PAKBJLMI_01405 1.9e-217 natB CP ABC-2 family transporter protein
PAKBJLMI_01406 2.6e-166 natA S ABC transporter, ATP-binding protein
PAKBJLMI_01407 6.2e-08
PAKBJLMI_01408 4e-69
PAKBJLMI_01409 2.1e-25
PAKBJLMI_01410 8.2e-31 yozG K Transcriptional regulator
PAKBJLMI_01411 9e-90
PAKBJLMI_01412 8.8e-21
PAKBJLMI_01417 8.1e-209 blpT
PAKBJLMI_01418 3.4e-106 M Transport protein ComB
PAKBJLMI_01419 0.0 comA V ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
PAKBJLMI_01420 4.2e-07
PAKBJLMI_01422 1.2e-146 K LytTr DNA-binding domain
PAKBJLMI_01423 8e-233 2.7.13.3 T GHKL domain
PAKBJLMI_01427 7e-110
PAKBJLMI_01429 5.1e-109 S CAAX protease self-immunity
PAKBJLMI_01430 1.2e-216 S CAAX protease self-immunity
PAKBJLMI_01431 1.4e-37 S Enterocin A Immunity
PAKBJLMI_01432 0.0 malZ 3.2.1.20 GH31 G Belongs to the glycosyl hydrolase 31 family
PAKBJLMI_01433 1.1e-26
PAKBJLMI_01434 1.5e-33
PAKBJLMI_01435 4e-53 S Enterocin A Immunity
PAKBJLMI_01436 9.4e-49 S Enterocin A Immunity
PAKBJLMI_01437 7.2e-146 racD 5.1.1.13 M Belongs to the aspartate glutamate racemases family
PAKBJLMI_01438 2.5e-305 murE 6.3.2.13, 6.3.2.7 M Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
PAKBJLMI_01439 5.8e-195 hpk31 2.7.13.3 T His Kinase A (phospho-acceptor) domain
PAKBJLMI_01440 2.5e-121 K response regulator
PAKBJLMI_01441 0.0 V ABC transporter
PAKBJLMI_01442 1.3e-304 V ABC transporter, ATP-binding protein
PAKBJLMI_01443 2e-138 XK27_01040 S Protein of unknown function (DUF1129)
PAKBJLMI_01444 1.6e-202 ychF J ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
PAKBJLMI_01445 9.6e-45 yyzM S Bacterial protein of unknown function (DUF951)
PAKBJLMI_01446 3.4e-155 spo0J K Belongs to the ParB family
PAKBJLMI_01447 1.3e-137 soj D Sporulation initiation inhibitor
PAKBJLMI_01448 7.2e-147 noc K Belongs to the ParB family
PAKBJLMI_01449 1.4e-130 rsmG 2.1.1.170 J Specifically methylates the N7 position of a guanine in 16S rRNA
PAKBJLMI_01450 7.9e-54 cvpA S Colicin V production protein
PAKBJLMI_01451 3.5e-182 apbE 2.7.1.180 H Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
PAKBJLMI_01452 2.5e-149 3.1.3.48 T Tyrosine phosphatase family
PAKBJLMI_01453 3.1e-98 azr 1.5.1.36 S NADPH-dependent FMN reductase
PAKBJLMI_01454 7.6e-97 nqr 1.5.1.36 S NADPH-dependent FMN reductase
PAKBJLMI_01455 1.3e-111 K WHG domain
PAKBJLMI_01456 1.5e-36
PAKBJLMI_01457 1.1e-277 pipD E Dipeptidase
PAKBJLMI_01458 9.8e-118 devA 3.6.3.25 V ABC transporter, ATP-binding protein
PAKBJLMI_01459 1.3e-180 hrtB V ABC transporter permease
PAKBJLMI_01460 4.8e-96 ygfC K Bacterial regulatory proteins, tetR family
PAKBJLMI_01461 2.4e-112 3.1.3.73 G phosphoglycerate mutase
PAKBJLMI_01462 2e-140 aroD S Alpha/beta hydrolase family
PAKBJLMI_01463 2e-143 S Belongs to the UPF0246 family
PAKBJLMI_01464 3.8e-119
PAKBJLMI_01465 4.6e-159 2.7.7.12 C Domain of unknown function (DUF4931)
PAKBJLMI_01466 9.3e-220 S Putative peptidoglycan binding domain
PAKBJLMI_01467 2.6e-26
PAKBJLMI_01468 1.3e-252 dtpT U amino acid peptide transporter
PAKBJLMI_01469 0.0 pepN 3.4.11.2 E aminopeptidase
PAKBJLMI_01470 4.5e-61 lysM M LysM domain
PAKBJLMI_01471 6.1e-177
PAKBJLMI_01472 2.8e-102 mdtG EGP Major Facilitator Superfamily
PAKBJLMI_01473 2.9e-114 mdtG EGP Major facilitator Superfamily
PAKBJLMI_01475 6e-213 I transferase activity, transferring acyl groups other than amino-acyl groups
PAKBJLMI_01476 1.2e-91 ymdB S Macro domain protein
PAKBJLMI_01477 0.0 nisT V ABC transporter
PAKBJLMI_01478 3.7e-07
PAKBJLMI_01480 1.6e-146 K Helix-turn-helix XRE-family like proteins
PAKBJLMI_01481 6.7e-84
PAKBJLMI_01482 1.4e-148 malG P ABC transporter permease
PAKBJLMI_01483 7.9e-252 malF P Binding-protein-dependent transport system inner membrane component
PAKBJLMI_01484 5.9e-214 malE G Bacterial extracellular solute-binding protein
PAKBJLMI_01485 1.6e-210 msmX P Belongs to the ABC transporter superfamily
PAKBJLMI_01486 7e-264 L COG2963 Transposase and inactivated derivatives
PAKBJLMI_01487 9.6e-118 pgmB 2.4.1.64, 3.1.3.12, 3.2.1.28, 5.4.2.6 GH37,GH65 S beta-phosphoglucomutase
PAKBJLMI_01488 0.0 map2 2.4.1.8 GH65 G hydrolase, family 65, central catalytic
PAKBJLMI_01489 0.0 nplT 3.2.1.133, 3.2.1.135, 3.2.1.54 GH13 G Belongs to the glycosyl hydrolase 13 family
PAKBJLMI_01490 0.0 malL 3.2.1.10, 3.2.1.20 GH13,GH31 G Alpha amylase, catalytic domain
PAKBJLMI_01491 9.4e-217 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
PAKBJLMI_01492 4.8e-179 yvdE K helix_turn _helix lactose operon repressor
PAKBJLMI_01493 6.7e-147 ptp2 3.1.3.48 T Tyrosine phosphatase family
PAKBJLMI_01494 6.8e-295 V ABC transporter transmembrane region
PAKBJLMI_01495 5e-75
PAKBJLMI_01496 3.4e-16
PAKBJLMI_01497 1.4e-294 glpK 2.7.1.30 F Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
PAKBJLMI_01498 2.4e-150 thiD 2.5.1.3, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Phosphomethylpyrimidine kinase
PAKBJLMI_01499 3.3e-57 S Protein conserved in bacteria
PAKBJLMI_01500 2.2e-170 L transposase, IS605 OrfB family
PAKBJLMI_01501 7.6e-134 cobQ S glutamine amidotransferase
PAKBJLMI_01502 9.5e-83 M NlpC/P60 family
PAKBJLMI_01503 1.6e-166 EG EamA-like transporter family
PAKBJLMI_01504 3.2e-167 EG EamA-like transporter family
PAKBJLMI_01505 1.6e-163 yicL EG EamA-like transporter family
PAKBJLMI_01506 3.1e-105
PAKBJLMI_01507 1.5e-56
PAKBJLMI_01508 1.6e-246 purB 4.3.2.2 F Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
PAKBJLMI_01509 3.2e-250 purA 6.3.4.4 F Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
PAKBJLMI_01510 2e-188 guaC 1.1.1.205, 1.7.1.7 F Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
PAKBJLMI_01513 1.5e-202 4.2.1.126 S Bacterial protein of unknown function (DUF871)
PAKBJLMI_01514 3e-195 asnA 6.3.1.1 F aspartate--ammonia ligase
PAKBJLMI_01515 1.1e-118 frnE Q DSBA-like thioredoxin domain
PAKBJLMI_01516 1.3e-176 trxB 1.8.1.9 C Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
PAKBJLMI_01517 3.6e-117 M1-798 K Rhodanese Homology Domain
PAKBJLMI_01519 1.1e-52 yusE CO Thioredoxin
PAKBJLMI_01520 1.7e-241 steT_1 E amino acid
PAKBJLMI_01521 8e-142 puuD S peptidase C26
PAKBJLMI_01522 3.6e-220 yifK E Amino acid permease
PAKBJLMI_01523 3.2e-205 cycA E Amino acid permease
PAKBJLMI_01524 7.1e-122
PAKBJLMI_01525 0.0 L Transposase
PAKBJLMI_01526 6.6e-116 lepB 3.4.21.89 U Belongs to the peptidase S26 family
PAKBJLMI_01527 0.0 clpE O AAA domain (Cdc48 subfamily)
PAKBJLMI_01528 5.1e-170 S Alpha/beta hydrolase of unknown function (DUF915)
PAKBJLMI_01529 1.4e-229 pts13C G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PAKBJLMI_01530 5e-125 XK27_06785 V ABC transporter, ATP-binding protein
PAKBJLMI_01531 0.0 XK27_06780 V ABC transporter permease
PAKBJLMI_01532 9.6e-36
PAKBJLMI_01533 2.2e-288 ytgP S Polysaccharide biosynthesis protein
PAKBJLMI_01534 4.3e-167 lysA2 M Glycosyl hydrolases family 25
PAKBJLMI_01535 4.4e-126 S Protein of unknown function (DUF975)
PAKBJLMI_01536 2.7e-61
PAKBJLMI_01537 2e-177 pbpX2 V Beta-lactamase
PAKBJLMI_01538 3.9e-248 dltD M Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
PAKBJLMI_01539 7.4e-36 dltC 6.1.1.13 J Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC-carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
PAKBJLMI_01540 2.6e-241 dltB M MBOAT, membrane-bound O-acyltransferase family
PAKBJLMI_01541 2e-296 dltA 6.1.1.13 H Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
PAKBJLMI_01542 7.6e-18 S D-Ala-teichoic acid biosynthesis protein
PAKBJLMI_01543 3.6e-40
PAKBJLMI_01544 9.1e-217 ywhK S Membrane
PAKBJLMI_01545 2.1e-82 ykuL S (CBS) domain
PAKBJLMI_01546 0.0 cadA P P-type ATPase
PAKBJLMI_01547 5e-194 napA P Sodium/hydrogen exchanger family
PAKBJLMI_01548 3.5e-72 S Putative adhesin
PAKBJLMI_01549 4.3e-286 V ABC transporter transmembrane region
PAKBJLMI_01550 2.8e-154 mutR K Helix-turn-helix XRE-family like proteins
PAKBJLMI_01551 3.2e-97 M CHAP domain
PAKBJLMI_01552 1.5e-68 K Helix-turn-helix XRE-family like proteins
PAKBJLMI_01553 2.7e-120 S CAAX protease self-immunity
PAKBJLMI_01554 1.6e-194 S DUF218 domain
PAKBJLMI_01555 0.0 macB_3 V ABC transporter, ATP-binding protein
PAKBJLMI_01556 1.6e-103 S ECF transporter, substrate-specific component
PAKBJLMI_01557 5.6e-186 tcsA S ABC transporter substrate-binding protein PnrA-like
PAKBJLMI_01558 5.6e-200 tcsA S ABC transporter substrate-binding protein PnrA-like
PAKBJLMI_01559 1.7e-287 xylG 3.6.3.17 S ABC transporter
PAKBJLMI_01560 5.1e-207 yufP S Belongs to the binding-protein-dependent transport system permease family
PAKBJLMI_01561 2.4e-170 yufQ S Belongs to the binding-protein-dependent transport system permease family
PAKBJLMI_01562 1.7e-159 yeaE S Aldo/keto reductase family
PAKBJLMI_01563 2.5e-135 nagB 3.1.1.31, 3.5.99.6 G Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
PAKBJLMI_01564 4.7e-117 dak 2.7.1.74, 2.7.1.76 F deoxynucleoside kinase
PAKBJLMI_01565 1.4e-127 dgk 2.7.1.74, 2.7.1.76 F deoxynucleoside kinase
PAKBJLMI_01566 8.5e-145 cof S haloacid dehalogenase-like hydrolase
PAKBJLMI_01567 1.1e-231 pbuG S permease
PAKBJLMI_01568 1.2e-241 L COG2963 Transposase and inactivated derivatives
PAKBJLMI_01569 3.5e-58 K helix_turn_helix, mercury resistance
PAKBJLMI_01570 6.3e-45 K helix_turn_helix, mercury resistance
PAKBJLMI_01571 5e-227 pbuG S permease
PAKBJLMI_01572 5.6e-177 pepL 3.4.11.5 E Releases the N-terminal proline from various substrates
PAKBJLMI_01573 2e-132 oppA2 E Bacterial extracellular solute-binding proteins, family 5 Middle
PAKBJLMI_01574 3.4e-166 oppA2 E Bacterial extracellular solute-binding proteins, family 5 Middle
PAKBJLMI_01575 3.4e-223 pbuG S permease
PAKBJLMI_01576 1.2e-23
PAKBJLMI_01577 3.8e-309 E ABC transporter, substratebinding protein
PAKBJLMI_01578 3.9e-75 atkY K Penicillinase repressor
PAKBJLMI_01579 1.8e-65 silP 1.9.3.1, 3.6.3.54 S Cupredoxin-like domain
PAKBJLMI_01580 3.7e-50 silP 1.9.3.1, 3.6.3.54 S Cupredoxin-like domain
PAKBJLMI_01581 0.0 copA 3.6.3.54 P P-type ATPase
PAKBJLMI_01582 2.7e-175 XK27_05540 S DUF218 domain
PAKBJLMI_01583 2.4e-130 WQ51_05710 S Mitochondrial biogenesis AIM24
PAKBJLMI_01584 5.5e-118 flpA 4.1.99.16, 4.2.3.22, 4.2.3.75 K helix_turn_helix, cAMP Regulatory protein
PAKBJLMI_01585 1.2e-213
PAKBJLMI_01586 1.1e-281 clcA P chloride
PAKBJLMI_01587 5.8e-274 gnd 1.1.1.343, 1.1.1.44 H Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
PAKBJLMI_01588 0.0 poxB 1.2.3.3, 1.2.5.1 EH Belongs to the TPP enzyme family
PAKBJLMI_01589 0.0 gidA D NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
PAKBJLMI_01590 3.9e-254 mnmE S Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
PAKBJLMI_01591 5.1e-151 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
PAKBJLMI_01592 3.5e-61 rnpA 3.1.26.5 J RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
PAKBJLMI_01593 1.1e-15 rpmH J Belongs to the bacterial ribosomal protein bL34 family
PAKBJLMI_01594 1.3e-246 dnaA L it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
PAKBJLMI_01595 3.8e-207 dnaN 2.7.7.7 L Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
PAKBJLMI_01596 5.9e-35 yaaA S S4 domain protein YaaA
PAKBJLMI_01597 1.3e-210 recF L it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
PAKBJLMI_01598 0.0 gyrB 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
PAKBJLMI_01599 0.0 gyrA 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
PAKBJLMI_01600 5.5e-49 rpsF J Binds together with S18 to 16S ribosomal RNA
PAKBJLMI_01601 2e-78 ssb L Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
PAKBJLMI_01602 1.2e-35 rpsR J Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
PAKBJLMI_01603 0.0 yybT T signaling protein consisting of a modified GGDEF domain and a DHH domain
PAKBJLMI_01604 2.1e-71 rplI J Binds to the 23S rRNA
PAKBJLMI_01605 5.5e-256 dnaB 3.6.4.12 L Participates in initiation and elongation during chromosome replication
PAKBJLMI_01606 1.1e-172 phnD P ABC transporter, phosphonate, periplasmic substrate-binding protein
PAKBJLMI_01607 8.3e-176 degV S DegV family
PAKBJLMI_01608 1.6e-169 scrK 2.7.1.2, 2.7.1.4 GK ROK family
PAKBJLMI_01609 1e-16 S CsbD-like
PAKBJLMI_01610 1e-30
PAKBJLMI_01611 2.6e-238 I Protein of unknown function (DUF2974)
PAKBJLMI_01613 6.7e-97 cadD P Cadmium resistance transporter
PAKBJLMI_01614 1.6e-58 cadX K helix_turn_helix, Arsenical Resistance Operon Repressor
PAKBJLMI_01615 5e-184
PAKBJLMI_01616 4.6e-54
PAKBJLMI_01617 1.1e-206 D COG1674 DNA segregation ATPase FtsK SpoIIIE and related proteins
PAKBJLMI_01618 8.6e-93
PAKBJLMI_01619 4.9e-184 repB EP Plasmid replication protein
PAKBJLMI_01620 1.5e-31
PAKBJLMI_01621 3.6e-143 L Belongs to the 'phage' integrase family
PAKBJLMI_01622 1.3e-78 L Belongs to the 'phage' integrase family
PAKBJLMI_01623 1.3e-31
PAKBJLMI_01624 6.5e-69 doc S Fic/DOC family
PAKBJLMI_01625 5.3e-20 S Protein of unknown function (DUF3923)
PAKBJLMI_01628 3.9e-161 aacC 2.3.1.81 V Aminoglycoside 3-N-acetyltransferase
PAKBJLMI_01629 2.3e-278 pipD E Dipeptidase
PAKBJLMI_01630 1.8e-162 S LPXTG cell wall anchor motif
PAKBJLMI_01631 7e-37 S LPXTG cell wall anchor motif
PAKBJLMI_01632 3.6e-151 S Putative ABC-transporter type IV
PAKBJLMI_01633 7.7e-100 yvqK 1.2.1.88, 1.5.5.2, 2.5.1.17 S cob(I)alamin adenosyltransferase
PAKBJLMI_01634 4.5e-86 S ECF transporter, substrate-specific component
PAKBJLMI_01635 5.9e-54 S Domain of unknown function (DUF4430)
PAKBJLMI_01636 0.0 rtpR 1.1.98.6, 1.17.4.1, 1.17.4.2 F ribonucleoside-triphosphate reductase activity
PAKBJLMI_01637 7.1e-176 K AI-2E family transporter
PAKBJLMI_01638 3.6e-105 3.1.1.5 E GDSL-like Lipase/Acylhydrolase
PAKBJLMI_01639 5.5e-15
PAKBJLMI_01640 7.6e-247 G Major Facilitator
PAKBJLMI_01641 1.7e-52
PAKBJLMI_01642 2.6e-135 XK27_08845 S ABC transporter, ATP-binding protein
PAKBJLMI_01643 2.6e-126 XK27_08840 U Belongs to the binding-protein-dependent transport system permease family
PAKBJLMI_01644 1.5e-178 ABC-SBP S ABC transporter
PAKBJLMI_01645 4e-138 yjjG 3.1.3.102, 3.1.3.104, 3.1.3.5, 3.8.1.2 S Haloacid dehalogenase-like hydrolase
PAKBJLMI_01646 0.0 tetP J elongation factor G
PAKBJLMI_01647 6.2e-151 3.1.3.102, 3.1.3.104 S hydrolase
PAKBJLMI_01648 6.5e-30 S endonuclease exonuclease phosphatase family protein
PAKBJLMI_01649 2.7e-134 S endonuclease exonuclease phosphatase family protein
PAKBJLMI_01650 2.8e-15 S endonuclease exonuclease phosphatase family protein
PAKBJLMI_01651 1.4e-192 ldhA 1.1.1.28 C Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PAKBJLMI_01652 1.8e-153 xth 3.1.11.2 L exodeoxyribonuclease III
PAKBJLMI_01653 1e-273 E amino acid
PAKBJLMI_01654 5.8e-36 L Helicase C-terminal domain protein
PAKBJLMI_01655 0.0 L Helicase C-terminal domain protein
PAKBJLMI_01656 2.9e-215 pbpX1 V Beta-lactamase
PAKBJLMI_01657 3.2e-71 def 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins
PAKBJLMI_01659 2.2e-51 K LysR substrate binding domain
PAKBJLMI_01660 4.2e-56 1.3.5.4 S FMN_bind
PAKBJLMI_01661 2.6e-230 1.3.5.4 C FAD binding domain
PAKBJLMI_01662 5.6e-115 K Transcriptional regulator, LysR family
PAKBJLMI_01663 1.5e-38 S Cytochrome B5
PAKBJLMI_01664 5e-167 arbZ I Phosphate acyltransferases
PAKBJLMI_01665 8.4e-184 arbY M Glycosyl transferase family 8
PAKBJLMI_01666 2.2e-187 arbY M Glycosyl transferase family 8
PAKBJLMI_01667 1.1e-158 arbx M Glycosyl transferase family 8
PAKBJLMI_01668 2.1e-148 arbV 2.3.1.51 I Acyl-transferase
PAKBJLMI_01669 3e-78
PAKBJLMI_01670 2.8e-288 P ABC transporter
PAKBJLMI_01671 1.4e-295 V ABC-type multidrug transport system, ATPase and permease components
PAKBJLMI_01673 9.7e-132 K response regulator
PAKBJLMI_01674 1.5e-306 vicK 2.7.13.3 T Histidine kinase
PAKBJLMI_01675 1e-259 yycH S YycH protein
PAKBJLMI_01676 9.4e-147 yycI S YycH protein
PAKBJLMI_01677 1.1e-149 vicX 3.1.26.11 S domain protein
PAKBJLMI_01678 8.8e-149 htrA 3.4.21.107 O serine protease
PAKBJLMI_01679 1e-81 rlmH 2.1.1.177 J Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
PAKBJLMI_01680 2.4e-150 K Helix-turn-helix XRE-family like proteins
PAKBJLMI_01682 2.1e-258 S CAAX protease self-immunity
PAKBJLMI_01683 4.5e-18
PAKBJLMI_01684 1.1e-121
PAKBJLMI_01685 1.3e-175 pepI 3.4.11.5, 3.5.1.101 E Releases the N-terminal proline from various substrates
PAKBJLMI_01686 8.9e-92 P Cobalt transport protein
PAKBJLMI_01687 2.3e-251 cbiO1 S ABC transporter, ATP-binding protein
PAKBJLMI_01688 3.9e-173 K helix_turn_helix, arabinose operon control protein
PAKBJLMI_01689 1.6e-163 htpX O Belongs to the peptidase M48B family
PAKBJLMI_01690 1.4e-93 lemA S LemA family
PAKBJLMI_01691 2.9e-171 ybiR P Citrate transporter
PAKBJLMI_01693 2.2e-69 S Iron-sulphur cluster biosynthesis
PAKBJLMI_01694 1.1e-301 glpQ 3.1.4.46 C Membrane domain of glycerophosphoryl diester phosphodiesterase
PAKBJLMI_01695 1.2e-17
PAKBJLMI_01696 4.4e-98
PAKBJLMI_01697 6.8e-37
PAKBJLMI_01699 1.6e-228 ydaM M Glycosyl transferase family group 2
PAKBJLMI_01700 1.5e-211 G Glycosyl hydrolases family 8
PAKBJLMI_01701 3.7e-122 yfbR S HD containing hydrolase-like enzyme
PAKBJLMI_01702 4e-161 L HNH nucleases
PAKBJLMI_01703 1.2e-182 S Protein of unknown function (DUF805)
PAKBJLMI_01704 2.1e-137 glnQ E ABC transporter, ATP-binding protein
PAKBJLMI_01705 1e-293 glnP P ABC transporter permease
PAKBJLMI_01706 5.5e-123 mpg 3.2.2.21 L Belongs to the DNA glycosylase MPG family
PAKBJLMI_01707 2.5e-64 yeaO S Protein of unknown function, DUF488
PAKBJLMI_01708 5.8e-138 terC P Integral membrane protein TerC family
PAKBJLMI_01709 6.6e-55 ogt 2.1.1.63 L 6-O-methylguanine DNA methyltransferase, DNA binding domain
PAKBJLMI_01710 2.3e-133 cobB K SIR2 family
PAKBJLMI_01711 1.7e-84
PAKBJLMI_01712 1.2e-285 cls I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
PAKBJLMI_01713 1.9e-180 S Alpha/beta hydrolase of unknown function (DUF915)
PAKBJLMI_01714 3.5e-134 rnhA 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
PAKBJLMI_01715 7.7e-137 ypuA S Protein of unknown function (DUF1002)
PAKBJLMI_01716 7.3e-160 2.4.1.293 GT2 M Glycosyltransferase like family 2
PAKBJLMI_01717 5.6e-126 S Alpha/beta hydrolase family
PAKBJLMI_01718 8.3e-148 K Helix-turn-helix XRE-family like proteins
PAKBJLMI_01719 2.9e-51
PAKBJLMI_01720 1.2e-241 L COG2963 Transposase and inactivated derivatives
PAKBJLMI_01721 4.1e-46
PAKBJLMI_01722 1.6e-76 3.6.4.12 K Putative ATP-dependent DNA helicase recG C-terminal
PAKBJLMI_01723 2e-183 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
PAKBJLMI_01724 1.4e-124 luxT K Bacterial regulatory proteins, tetR family
PAKBJLMI_01725 2.1e-130
PAKBJLMI_01726 1.4e-257 glnPH2 P ABC transporter permease
PAKBJLMI_01727 1.1e-133 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
PAKBJLMI_01728 6.6e-229 S Cysteine-rich secretory protein family
PAKBJLMI_01729 4.7e-207 ddl 6.3.2.4 F Belongs to the D-alanine--D-alanine ligase family
PAKBJLMI_01730 7.2e-90
PAKBJLMI_01731 4.8e-202 yibE S overlaps another CDS with the same product name
PAKBJLMI_01732 2.4e-131 yibF S overlaps another CDS with the same product name
PAKBJLMI_01733 5.6e-160 I alpha/beta hydrolase fold
PAKBJLMI_01734 0.0 G Belongs to the glycosyl hydrolase 31 family
PAKBJLMI_01735 5.2e-228 nagA 3.5.1.25 G Belongs to the metallo-dependent hydrolases superfamily. NagA family
PAKBJLMI_01736 1.8e-89 ntd 2.4.2.6 F Nucleoside
PAKBJLMI_01737 1.1e-86 2.7.1.200, 2.7.1.202, 2.7.1.204 G Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
PAKBJLMI_01738 2.2e-148 ptp3 3.1.3.48 T Tyrosine phosphatase family
PAKBJLMI_01739 2.1e-85 uspA T universal stress protein
PAKBJLMI_01740 1.5e-164 phnD P Phosphonate ABC transporter
PAKBJLMI_01741 2.3e-139 phnC 3.6.3.28 P Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
PAKBJLMI_01742 2.8e-132 phnE 3.6.1.63 P Binding-protein-dependent transport system inner membrane component
PAKBJLMI_01743 7.6e-149 phnE 3.6.1.63 P Binding-protein-dependent transport system inner membrane component
PAKBJLMI_01744 8.6e-107 tag 3.2.2.20 L glycosylase
PAKBJLMI_01745 1.5e-83
PAKBJLMI_01746 3.4e-274 S Calcineurin-like phosphoesterase
PAKBJLMI_01747 0.0 asnB 6.3.5.4 E Asparagine synthase
PAKBJLMI_01748 3.3e-252 yxbA 6.3.1.12 S ATP-grasp enzyme
PAKBJLMI_01749 0.0 nrdD 1.1.98.6 F Ribonucleoside-triphosphate reductase
PAKBJLMI_01750 8.1e-139 nrdG 1.97.1.4 O Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
PAKBJLMI_01751 6.5e-99 S Iron-sulfur cluster assembly protein
PAKBJLMI_01752 1.1e-233 XK27_04775 S PAS domain
PAKBJLMI_01753 1.1e-228 yttB EGP Major facilitator Superfamily
PAKBJLMI_01754 0.0 pepO 3.4.24.71 O Peptidase family M13
PAKBJLMI_01755 0.0 kup P Transport of potassium into the cell
PAKBJLMI_01756 1.9e-69
PAKBJLMI_01757 6.9e-11
PAKBJLMI_01758 7.9e-212 S SLAP domain
PAKBJLMI_01759 3e-60 queD 4.1.2.50, 4.2.3.12 H 6-pyruvoyl tetrahydropterin synthase
PAKBJLMI_01760 2.4e-256 ica2 GT2 M Glycosyl transferase family group 2
PAKBJLMI_01761 7.3e-173
PAKBJLMI_01762 2.6e-226 S SLAP domain
PAKBJLMI_01763 1.1e-207 NU Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
PAKBJLMI_01764 7.2e-211 atl 3.2.1.96, 3.5.1.28 GH73 M N-acetylmuramoyl-L-alanine amidase
PAKBJLMI_01765 0.0 yjbQ P TrkA C-terminal domain protein
PAKBJLMI_01766 9.8e-180 S Oxidoreductase family, NAD-binding Rossmann fold
PAKBJLMI_01767 7.4e-141
PAKBJLMI_01768 1.5e-135
PAKBJLMI_01769 2.5e-132 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
PAKBJLMI_01770 1.8e-110 pcp 3.4.19.3 O Removes 5-oxoproline from various penultimate amino acid residues except L-proline
PAKBJLMI_01771 1.6e-102 G Aldose 1-epimerase
PAKBJLMI_01772 2.7e-202 brpA K Cell envelope-like function transcriptional attenuator common domain protein
PAKBJLMI_01773 6.4e-108 plsY 2.3.1.15 I Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
PAKBJLMI_01774 0.0 XK27_08315 M Sulfatase
PAKBJLMI_01775 6.2e-268 S Fibronectin type III domain
PAKBJLMI_01776 3.3e-244 tyrS 6.1.1.1 J Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
PAKBJLMI_01777 3.3e-56
PAKBJLMI_01779 7.2e-258 pepC 3.4.22.40 E aminopeptidase
PAKBJLMI_01780 1.2e-125 ypgQ S Metal dependent phosphohydrolases with conserved 'HD' motif.
PAKBJLMI_01781 5e-293 oppA E ABC transporter, substratebinding protein
PAKBJLMI_01782 4.6e-307 oppA E ABC transporter, substratebinding protein
PAKBJLMI_01783 7.5e-211 guaB 1.1.1.205 F Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
PAKBJLMI_01784 1.1e-143 oppB P ABC-type dipeptide oligopeptide nickel transport systems, permease components
PAKBJLMI_01785 4e-187 oppC EP ABC-type dipeptide oligopeptide nickel transport systems, permease components
PAKBJLMI_01786 2.2e-201 oppD P Belongs to the ABC transporter superfamily
PAKBJLMI_01787 1.9e-175 oppF P Belongs to the ABC transporter superfamily
PAKBJLMI_01788 2.3e-256 pepC 3.4.22.40 E aminopeptidase
PAKBJLMI_01789 2.4e-69 hsp O Belongs to the small heat shock protein (HSP20) family
PAKBJLMI_01790 8.8e-78 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
PAKBJLMI_01791 1.3e-114
PAKBJLMI_01793 4.2e-112 E Belongs to the SOS response-associated peptidase family
PAKBJLMI_01794 6.3e-193 trpS 6.1.1.2 J Belongs to the class-I aminoacyl-tRNA synthetase family
PAKBJLMI_01795 6.5e-92 comEB 3.5.4.12 F MafB19-like deaminase
PAKBJLMI_01796 3.4e-109 S TPM domain
PAKBJLMI_01797 0.0 mgtA 3.6.3.2 P COG0474 Cation transport ATPase
PAKBJLMI_01798 0.0 metG 6.1.1.10 J Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
PAKBJLMI_01799 6e-148 tatD L hydrolase, TatD family
PAKBJLMI_01800 1.6e-92 rnmV 3.1.26.8 J Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
PAKBJLMI_01801 1.4e-161 ksgA 2.1.1.182 J Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
PAKBJLMI_01802 3.5e-39 veg S Biofilm formation stimulator VEG
PAKBJLMI_01803 1.6e-149 purR 2.4.2.22, 2.4.2.7 F pur operon repressor
PAKBJLMI_01804 1.4e-211 glmU 2.3.1.157, 2.7.7.23 M Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
PAKBJLMI_01805 9.6e-89 S SLAP domain
PAKBJLMI_01806 2.2e-96 S SLAP domain
PAKBJLMI_01807 1.5e-86
PAKBJLMI_01808 7.3e-239 S SLAP domain
PAKBJLMI_01809 4.6e-177 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
PAKBJLMI_01810 5.2e-294 celA 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
PAKBJLMI_01811 7.7e-129 K Helix-turn-helix domain, rpiR family
PAKBJLMI_01812 1.2e-231 ptcC G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PAKBJLMI_01813 3.3e-169 2.7.1.2 GK ROK family
PAKBJLMI_01814 3.9e-44
PAKBJLMI_01815 7.2e-269 ywfO S Metal dependent phosphohydrolases with conserved 'HD' motif.
PAKBJLMI_01816 9.5e-68 S Domain of unknown function (DUF1934)
PAKBJLMI_01817 3.3e-47 rpoE K Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling
PAKBJLMI_01818 0.0 pyrG 6.3.4.2 F Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
PAKBJLMI_01819 1.8e-245 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
PAKBJLMI_01820 1.5e-277 pipD E Dipeptidase
PAKBJLMI_01821 7.4e-160 msmR K AraC-like ligand binding domain
PAKBJLMI_01822 7e-107 S Protein of unknown function (DUF1211)
PAKBJLMI_01823 5.2e-221 pbuX F xanthine permease
PAKBJLMI_01824 1.1e-104 xpt 2.4.2.22, 2.4.2.7 F Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
PAKBJLMI_01825 1.5e-135 K DNA-binding helix-turn-helix protein
PAKBJLMI_01826 7.5e-172 K Helix-turn-helix
PAKBJLMI_01827 6e-304 guaA 2.3.1.128, 6.3.5.2 F Catalyzes the synthesis of GMP from XMP
PAKBJLMI_01828 2.5e-155 cylA V ABC transporter
PAKBJLMI_01829 4e-148 cylB V ABC-2 type transporter
PAKBJLMI_01830 2.9e-73 K LytTr DNA-binding domain
PAKBJLMI_01831 2.7e-43 S Protein of unknown function (DUF3021)
PAKBJLMI_01832 1.9e-89 XK27_09675 K Acetyltransferase (GNAT) domain
PAKBJLMI_01833 7e-135 S B3 4 domain
PAKBJLMI_01834 5.4e-90 lmrB P Belongs to the major facilitator superfamily
PAKBJLMI_01835 1.6e-32 P Belongs to the major facilitator superfamily
PAKBJLMI_01836 1.9e-30
PAKBJLMI_01837 7.7e-82 ogt 2.1.1.63 L Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
PAKBJLMI_01838 2.5e-28 K NAD+ binding
PAKBJLMI_01840 2.1e-96
PAKBJLMI_01841 3.7e-51
PAKBJLMI_01842 6.7e-44
PAKBJLMI_01843 1.3e-232 glyA 2.1.2.1 E Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
PAKBJLMI_01844 1.1e-300 ybeC E amino acid
PAKBJLMI_01845 3.7e-159 G Sucrose-6F-phosphate phosphohydrolase
PAKBJLMI_01846 0.0 dexB 3.2.1.10, 3.2.1.70 GH13 G Alpha amylase, catalytic domain protein
PAKBJLMI_01847 1.9e-39 rpmE2 J Ribosomal protein L31
PAKBJLMI_01848 7.7e-263 murF 6.3.2.10, 6.3.2.13 M Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
PAKBJLMI_01849 3.9e-252 cshA 3.6.4.13 F DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA- dependent ATPase activity
PAKBJLMI_01850 7.6e-61 acpS 2.7.6.3, 2.7.8.7, 5.1.1.1 I Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
PAKBJLMI_01851 1.2e-216 alr 5.1.1.1 E Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
PAKBJLMI_01852 2.9e-128 S (CBS) domain
PAKBJLMI_01853 2.1e-182 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily. LDH family
PAKBJLMI_01854 1.3e-104 pth 3.1.1.29 J The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
PAKBJLMI_01855 0.0 mfd L Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
PAKBJLMI_01856 1.9e-275 mfd L Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
PAKBJLMI_01857 2.4e-34 yabO J S4 domain protein
PAKBJLMI_01858 1.1e-57 divIC D Septum formation initiator
PAKBJLMI_01859 2.8e-63 yabR J S1 RNA binding domain
PAKBJLMI_01860 2.2e-240 tilS 2.4.2.8, 6.3.4.19 J Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
PAKBJLMI_01861 0.0 ftsH O Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
PAKBJLMI_01862 2.6e-166 hslO O Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
PAKBJLMI_01863 1.4e-195 dus J Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
PAKBJLMI_01864 1.5e-302 lysS 6.1.1.6 J Belongs to the class-II aminoacyl-tRNA synthetase family
PAKBJLMI_01865 7.8e-08
PAKBJLMI_01866 7.8e-08
PAKBJLMI_01868 4.9e-81 yebR 1.8.4.14 T GAF domain-containing protein
PAKBJLMI_01869 0.0 clpC O Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
PAKBJLMI_01870 0.0 rpoB 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PAKBJLMI_01871 0.0 rpoC 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PAKBJLMI_01872 7.9e-123 pilD 3.4.23.43 NOU Bacterial Peptidase A24 N-terminal domain
PAKBJLMI_01873 1.3e-69 rpsL J Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
PAKBJLMI_01874 2.7e-82 rpsG J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
PAKBJLMI_01875 0.0 fusA J Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
PAKBJLMI_01876 4.4e-49 rpsJ J Involved in the binding of tRNA to the ribosomes
PAKBJLMI_01877 6.9e-113 rplC J One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
PAKBJLMI_01878 4.6e-106 rplD J Forms part of the polypeptide exit tunnel
PAKBJLMI_01879 3.4e-46 rplW J One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
PAKBJLMI_01880 4.3e-155 rplB J One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
PAKBJLMI_01881 9.4e-46 rpsS J Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
PAKBJLMI_01882 3.1e-54 rplV J The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
PAKBJLMI_01883 4.9e-109 rpsC J Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
PAKBJLMI_01884 6e-76 rplP J Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
PAKBJLMI_01885 1.3e-25 rpmC J Belongs to the universal ribosomal protein uL29 family
PAKBJLMI_01886 3.8e-41 rpsQ J One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
PAKBJLMI_01887 1.1e-59 rplN J Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
PAKBJLMI_01888 4.4e-33 rplX J One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
PAKBJLMI_01889 7.2e-95 rplE J This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
PAKBJLMI_01890 8.9e-29 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
PAKBJLMI_01891 9.3e-68 rpsH J One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
PAKBJLMI_01892 2.5e-92 rplF J This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
PAKBJLMI_01893 2.1e-55 rplR J This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
PAKBJLMI_01894 3.1e-84 rpsE J Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
PAKBJLMI_01895 2.3e-24 rpmD J Ribosomal protein L30
PAKBJLMI_01896 2e-71 rplO J Binds to the 23S rRNA
PAKBJLMI_01897 4e-237 secY U The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
PAKBJLMI_01898 2e-120 adk 2.7.4.3 F Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
PAKBJLMI_01899 8.4e-34 infA J One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
PAKBJLMI_01900 2.7e-15 rpmJ J Belongs to the bacterial ribosomal protein bL36 family
PAKBJLMI_01901 4.2e-56 rpsM J Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
PAKBJLMI_01902 4e-63 rpsK J Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
PAKBJLMI_01903 8.1e-171 rpoA 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PAKBJLMI_01904 8.2e-61 rplQ J Ribosomal protein L17
PAKBJLMI_01905 2.8e-154 ecfA1 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
PAKBJLMI_01906 2.4e-161 ecfA 3.6.3.55 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
PAKBJLMI_01907 9.7e-141 ecfT U Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
PAKBJLMI_01908 3e-150 truA 5.4.99.12 J Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
PAKBJLMI_01909 5.9e-79 rplM J This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
PAKBJLMI_01910 3.5e-67 rpsI J Belongs to the universal ribosomal protein uS9 family
PAKBJLMI_01911 2.8e-11
PAKBJLMI_01912 2.5e-109 thiJ 2.7.11.1, 3.5.1.124 S DJ-1/PfpI family
PAKBJLMI_01913 2.5e-118 3.1.3.102, 3.1.3.104, 3.8.1.2 S Haloacid dehalogenase-like hydrolase
PAKBJLMI_01914 5.8e-111 S membrane transporter protein
PAKBJLMI_01915 4.7e-128 pgm3 5.4.2.11 G Belongs to the phosphoglycerate mutase family
PAKBJLMI_01916 2.1e-163 czcD P cation diffusion facilitator family transporter
PAKBJLMI_01917 2.2e-19
PAKBJLMI_01918 2.4e-80 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
PAKBJLMI_01919 6.4e-184 S AAA domain
PAKBJLMI_01920 1.9e-266 pepC 3.4.22.40 E Peptidase C1-like family
PAKBJLMI_01921 7e-52
PAKBJLMI_01922 9.5e-103 dut 3.6.1.23, 4.1.1.36, 6.3.2.5 F dUTP diphosphatase
PAKBJLMI_01923 9.2e-256 radA O DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
PAKBJLMI_01924 9.3e-278 gltX 6.1.1.17, 6.1.1.24 J Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
PAKBJLMI_01925 6.8e-278 cysS 6.1.1.16, 6.3.1.13 J Belongs to the class-I aminoacyl-tRNA synthetase family
PAKBJLMI_01926 2.3e-75 mrnC J Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
PAKBJLMI_01927 2e-140 rlmB 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
PAKBJLMI_01928 3.5e-94 sigH K Belongs to the sigma-70 factor family
PAKBJLMI_01929 2.2e-34
PAKBJLMI_01930 3.5e-114
PAKBJLMI_01931 3.7e-287 gntK 2.7.1.12, 2.7.1.17 G Belongs to the FGGY kinase family
PAKBJLMI_01932 8.1e-173 K helix_turn_helix, arabinose operon control protein
PAKBJLMI_01933 0.0 dxs 2.2.1.7 H Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
PAKBJLMI_01934 7.8e-24 secE U Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
PAKBJLMI_01935 6.2e-102 nusG K Participates in transcription elongation, termination and antitermination
PAKBJLMI_01936 6.9e-69 rplK J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
PAKBJLMI_01937 4.2e-124 rplA J Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
PAKBJLMI_01938 1.5e-158 pstS P Phosphate
PAKBJLMI_01939 5.2e-176 pstC P probably responsible for the translocation of the substrate across the membrane
PAKBJLMI_01940 2.6e-155 pstA P Phosphate transport system permease protein PstA
PAKBJLMI_01941 4.2e-144 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
PAKBJLMI_01942 7e-141 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
PAKBJLMI_01943 2e-118 phoU P Plays a role in the regulation of phosphate uptake
PAKBJLMI_01944 2.2e-210 yfdV S Membrane transport protein
PAKBJLMI_01945 2.2e-10
PAKBJLMI_01946 1.6e-83 rplJ J Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
PAKBJLMI_01947 2.2e-47 rplL J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
PAKBJLMI_01948 1.5e-123 potC 2.1.1.172, 2.1.1.80, 3.1.1.61 J Ion channel
PAKBJLMI_01949 6.4e-116 rsmC 2.1.1.172 J Methyltransferase
PAKBJLMI_01950 1.4e-23
PAKBJLMI_01951 1.2e-91 tadA 3.5.4.33 F Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
PAKBJLMI_01952 0.0 dnaX 2.7.7.7 L DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
PAKBJLMI_01953 3.5e-224 tnpB L Putative transposase DNA-binding domain
PAKBJLMI_01954 2e-42 yaaK S Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
PAKBJLMI_01955 3.7e-108 recR L May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
PAKBJLMI_01956 1.1e-34 S Protein of unknown function (DUF2508)
PAKBJLMI_01957 2.3e-116 tmk 2.7.4.9 F Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
PAKBJLMI_01958 5.8e-52 yaaQ S Cyclic-di-AMP receptor
PAKBJLMI_01959 2.6e-155 holB 2.7.7.7 L DNA polymerase III
PAKBJLMI_01960 3e-60 yabA L Involved in initiation control of chromosome replication
PAKBJLMI_01961 1.1e-81 rsmI 2.1.1.198 H Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
PAKBJLMI_01962 5.3e-50 rsmI 2.1.1.198 H Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
PAKBJLMI_01963 9.6e-143 fat 3.1.2.21 I Acyl-ACP thioesterase
PAKBJLMI_01964 5.2e-87 S ECF transporter, substrate-specific component
PAKBJLMI_01965 1.4e-133 yeaZ 2.3.1.234 O Universal bacterial protein YeaZ
PAKBJLMI_01966 3.3e-106 rimI 2.3.1.128 K Ribosomal-protein-alanine acetyltransferase
PAKBJLMI_01967 1.1e-197 tsaD 2.3.1.234 J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
PAKBJLMI_01968 1.3e-131 deoC 4.1.2.4 F Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
PAKBJLMI_01969 2.1e-182 S Oxidoreductase family, NAD-binding Rossmann fold
PAKBJLMI_01970 4.9e-128 yegW K UTRA
PAKBJLMI_01971 6.5e-234 yfdE 2.8.3.16, 2.8.3.19 C Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate
PAKBJLMI_01972 4.3e-266 frc 2.8.3.16, 2.8.3.19 C Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate
PAKBJLMI_01973 0.0 oxc 4.1.1.8 EH Belongs to the TPP enzyme family
PAKBJLMI_01974 0.0 uup S ABC transporter, ATP-binding protein
PAKBJLMI_01975 1.3e-111 rex K Modulates transcription in response to changes in cellular NADH NAD( ) redox state
PAKBJLMI_01976 3.1e-29 scrR K helix_turn _helix lactose operon repressor
PAKBJLMI_01978 8.2e-74 scrA 2.7.1.208, 2.7.1.211, 5.3.1.1 G phosphotransferase system

eggNOG-mapper v2 (Database: eggNOG v5.0, Jul. 2018 release)