ORF_ID e_value Gene_name EC_number CAZy COGs Description
DNDENEON_00001 1.7e-93 D Important for reducing fluoride concentration in the cell, thus reducing its toxicity
DNDENEON_00002 3.2e-54 crcB U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
DNDENEON_00003 2.3e-58 K Acetyltransferase (GNAT) domain
DNDENEON_00005 7.3e-227 ilvE 2.6.1.42 E Amino-transferase class IV
DNDENEON_00006 1.1e-133 S UPF0126 domain
DNDENEON_00007 2.9e-33 rpsT J Binds directly to 16S ribosomal RNA
DNDENEON_00008 0.0 lepA M Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
DNDENEON_00009 3e-234 hemN H Involved in the biosynthesis of porphyrin-containing compound
DNDENEON_00010 5e-145 IQ Oxidoreductase, short chain dehydrogenase reductase family protein
DNDENEON_00011 7.6e-288 luxC 1.2.1.50 C Acyl-CoA reductase (LuxC)
DNDENEON_00012 2.1e-218 luxE 6.2.1.19 H long-chain-fatty-acid--luciferin-component ligase, acyl-protein synthase
DNDENEON_00013 8.7e-235 F Psort location CytoplasmicMembrane, score 10.00
DNDENEON_00014 0.0 gltB 1.4.1.13, 1.4.1.14, 1.4.7.1 E glutamate synthase NADPH large subunit
DNDENEON_00015 2.2e-306 gltD 1.4.1.13, 1.4.1.14 C Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
DNDENEON_00016 2e-74
DNDENEON_00017 2.2e-248 glgA 2.4.1.342 GT4 G Starch synthase catalytic domain
DNDENEON_00018 4.2e-158 modF 3.6.3.21, 3.6.3.34 P ATPases associated with a variety of cellular activities
DNDENEON_00019 1.8e-198 trmI 2.1.1.219, 2.1.1.220 J Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
DNDENEON_00020 4.5e-100 sixA 3.6.1.55 T Phosphoglycerate mutase family
DNDENEON_00021 0.0 metE 2.1.1.14 E Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
DNDENEON_00022 1.6e-157 metF 1.5.1.20 E Methylenetetrahydrofolate reductase
DNDENEON_00023 0.0 glnE 2.7.7.42, 2.7.7.89 H Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transduction protein PII (GlnB) which indicates the nitrogen status of the cell
DNDENEON_00024 3e-187 pyrB 2.1.3.2 F Belongs to the ATCase OTCase family
DNDENEON_00025 4.2e-74 pyrI 2.1.3.2 F Aspartate carbamoyltransferase regulatory chain, allosteric domain protein
DNDENEON_00026 1.5e-277 pyrC 3.5.2.3 F Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
DNDENEON_00027 1.6e-177 pyrF 2.4.2.10, 4.1.1.23 F Belongs to the OMP decarboxylase family. Type 2 subfamily
DNDENEON_00028 9.3e-155 pyrK 1.18.1.2, 1.19.1.1, 1.4.1.13, 1.4.1.14 C Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B
DNDENEON_00029 6.6e-179 pyrD 1.3.1.14, 1.3.98.1 F Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
DNDENEON_00030 2.7e-123 pyrE 2.4.2.10 F Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
DNDENEON_00031 2.9e-162 cpsY K Bacterial regulatory helix-turn-helix protein, lysR family
DNDENEON_00032 0.0 thiC 2.5.1.3, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
DNDENEON_00033 8.8e-109 J Acetyltransferase (GNAT) domain
DNDENEON_00034 6.1e-69 arsC 1.20.4.1 T Belongs to the low molecular weight phosphotyrosine protein phosphatase family
DNDENEON_00035 2.5e-219 yxjG_1 E Psort location Cytoplasmic, score 8.87
DNDENEON_00036 6.1e-122 maa 2.3.1.18, 2.3.1.79 S Maltose acetyltransferase
DNDENEON_00037 1.8e-50 sdpR K helix_turn_helix, Arsenical Resistance Operon Repressor
DNDENEON_00038 1.4e-139 S SdpI/YhfL protein family
DNDENEON_00039 2.1e-109 3.8.1.2 S Haloacid dehalogenase-like hydrolase
DNDENEON_00040 0.0 nnrD 4.2.1.136, 5.1.99.6 H Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
DNDENEON_00041 5e-125 XK27_06785 V ABC transporter
DNDENEON_00043 1.6e-61
DNDENEON_00044 3.3e-96 M Peptidase family M23
DNDENEON_00045 0.0 fadD1 6.2.1.3 I AMP-binding enzyme
DNDENEON_00046 1.1e-268 G ABC transporter substrate-binding protein
DNDENEON_00047 5.3e-231 icd 1.1.1.42 C Belongs to the isocitrate and isopropylmalate dehydrogenases family
DNDENEON_00048 8.1e-210 guaB 1.1.1.205 F IMP dehydrogenase family protein
DNDENEON_00049 6.1e-108 dnaQ 2.7.7.7 L Exonuclease, DNA polymerase III, epsilon subunit family
DNDENEON_00050 9e-72 U Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family
DNDENEON_00051 2.6e-242 glmU 2.3.1.157, 2.7.7.23 M Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
DNDENEON_00052 6.2e-67 rsfS 2.7.7.18 J Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
DNDENEON_00053 9.5e-143 3.1.3.85, 5.4.2.11, 5.4.2.12 G Phosphoglycerate mutase family
DNDENEON_00054 2.1e-117
DNDENEON_00056 6.5e-232 XK27_00240 K Fic/DOC family
DNDENEON_00057 2.7e-70 pdxH S Pfam:Pyridox_oxidase
DNDENEON_00058 2.7e-302 M domain protein
DNDENEON_00059 5.6e-83 3.4.22.70 M Sortase family
DNDENEON_00060 5.2e-65 3.4.22.70 M Sortase family
DNDENEON_00061 1.5e-163 3.1.3.85, 5.4.2.11, 5.4.2.12 G Phosphoglycerate mutase family
DNDENEON_00062 5.7e-172 corA P CorA-like Mg2+ transporter protein
DNDENEON_00063 1.5e-142 ET Bacterial periplasmic substrate-binding proteins
DNDENEON_00064 0.0 leuS 6.1.1.4 J Belongs to the class-I aminoacyl-tRNA synthetase family
DNDENEON_00065 3.7e-92 comEA 2.4.1.21 GT5 L Helix-hairpin-helix motif
DNDENEON_00066 0.0 comE S Competence protein
DNDENEON_00067 6.5e-179 holA 2.7.7.7 L DNA polymerase III delta subunit
DNDENEON_00068 9.2e-94 ydiB 2.7.1.221, 5.1.1.1 S Threonylcarbamoyl adenosine biosynthesis protein TsaE
DNDENEON_00069 1.3e-148 yeaZ 2.3.1.234 O Glycoprotease family
DNDENEON_00070 2.6e-103 rimI 2.3.1.128, 2.3.1.234 K FR47-like protein
DNDENEON_00071 3.1e-195 tsaD 2.3.1.234 O Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
DNDENEON_00073 2.6e-119 yoaP E YoaP-like
DNDENEON_00074 4.5e-185 cbh 3.5.1.24 M Linear amide C-N hydrolase, choloylglycine hydrolase family protein
DNDENEON_00075 5.3e-119 ykoE S ABC-type cobalt transport system, permease component
DNDENEON_00076 6.7e-72 K MerR family regulatory protein
DNDENEON_00077 4.6e-199 adhB 1.1.1.1, 1.1.1.14 C Zinc-binding dehydrogenase
DNDENEON_00078 2.4e-144 4.1.1.44 S Carboxymuconolactone decarboxylase family
DNDENEON_00079 6e-221 yxjG_1 E Psort location Cytoplasmic, score 8.87
DNDENEON_00080 3.6e-76 S Psort location CytoplasmicMembrane, score
DNDENEON_00081 1e-182 cat P Cation efflux family
DNDENEON_00084 1e-98
DNDENEON_00085 2.9e-130
DNDENEON_00086 5.7e-146 mazG 3.6.1.66 S Psort location Cytoplasmic, score 8.87
DNDENEON_00087 6.7e-278 pepC 3.4.22.40 E Peptidase C1-like family
DNDENEON_00088 1e-173 S IMP dehydrogenase activity
DNDENEON_00089 1.3e-298 ybiT S ABC transporter
DNDENEON_00090 4.7e-111 pncA 2.7.11.1, 3.5.1.19 Q Isochorismatase family
DNDENEON_00091 2.8e-66 ogt 2.1.1.63 L Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
DNDENEON_00093 2e-13
DNDENEON_00094 7.6e-273 S Psort location Cytoplasmic, score 8.87
DNDENEON_00095 4.7e-140 S Domain of unknown function (DUF4194)
DNDENEON_00096 0.0 S Psort location Cytoplasmic, score 8.87
DNDENEON_00097 1e-218 S Psort location Cytoplasmic, score 8.87
DNDENEON_00098 0.0 uvrA L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
DNDENEON_00099 0.0 uvrC L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
DNDENEON_00100 6e-182 aroE 1.1.1.25 E Shikimate dehydrogenase substrate binding domain
DNDENEON_00101 1.1e-170 rapZ S Displays ATPase and GTPase activities
DNDENEON_00102 1.3e-171 whiA K May be required for sporulation
DNDENEON_00103 1.9e-220 pgk 2.7.2.3, 5.3.1.1 F Phosphoglycerate kinase
DNDENEON_00104 9.6e-149 tpiA 2.7.2.3, 5.3.1.1 G Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
DNDENEON_00105 2.4e-32 secG U Preprotein translocase SecG subunit
DNDENEON_00106 3.3e-163 S Sucrose-6F-phosphate phosphohydrolase
DNDENEON_00107 8e-301 alaA 2.6.1.2, 2.6.1.66 E Aminotransferase, class I II
DNDENEON_00108 7.1e-09 pnuC H Nicotinamide mononucleotide transporter
DNDENEON_00109 1.2e-29 pnuC H Nicotinamide mononucleotide transporter
DNDENEON_00110 2.7e-67 pnuC H Nicotinamide mononucleotide transporter
DNDENEON_00111 2.5e-49 nadD 2.7.1.22, 2.7.7.1, 2.7.7.18, 3.6.1.55 H ATPase kinase involved in NAD metabolism
DNDENEON_00112 2.2e-41 nadR H ATPase kinase involved in NAD metabolism
DNDENEON_00113 4.2e-203 tal 2.2.1.2 H Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
DNDENEON_00114 0.0 tkt 2.2.1.1 H Belongs to the transketolase family
DNDENEON_00115 4.7e-197 hrcA K Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
DNDENEON_00116 4.7e-189 dnaJ O ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
DNDENEON_00117 5.1e-158 G Fructosamine kinase
DNDENEON_00118 6.9e-156 uppP 3.6.1.27 V Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin
DNDENEON_00119 1.6e-156 S PAC2 family
DNDENEON_00127 5.4e-36
DNDENEON_00128 4.7e-76 garA T Inner membrane component of T3SS, cytoplasmic domain
DNDENEON_00129 9.7e-112 K helix_turn_helix, mercury resistance
DNDENEON_00130 4.6e-61
DNDENEON_00131 4.4e-140 pgp 3.1.3.18 S HAD-hyrolase-like
DNDENEON_00132 3.9e-62 rbpA K Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters
DNDENEON_00133 0.0 helY L DEAD DEAH box helicase
DNDENEON_00134 2.1e-54
DNDENEON_00135 0.0 pafB K WYL domain
DNDENEON_00136 1.4e-264 ugpA 2.7.7.9 G UTP-glucose-1-phosphate uridylyltransferase
DNDENEON_00138 1.1e-69
DNDENEON_00139 0.0 der 1.1.1.399, 1.1.1.95, 2.7.4.25 F GTPase that plays an essential role in the late steps of ribosome biogenesis
DNDENEON_00140 9.1e-144 rluB 5.4.99.19, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
DNDENEON_00141 6.4e-160 glpF U Belongs to the MIP aquaporin (TC 1.A.8) family
DNDENEON_00142 8.2e-34
DNDENEON_00143 0.0 purH 2.1.2.3, 3.5.4.10 F Bifunctional purine biosynthesis protein PurH
DNDENEON_00144 1.8e-246
DNDENEON_00145 7.5e-161 sucD 6.2.1.5 C Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
DNDENEON_00146 2.2e-221 sucC 6.2.1.5 F Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit
DNDENEON_00147 1.8e-99 apt 2.4.2.22, 2.4.2.7 F Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
DNDENEON_00148 1.8e-50 yajC U Preprotein translocase subunit
DNDENEON_00149 5.6e-200 ruvB 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
DNDENEON_00150 1e-105 ruvA 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
DNDENEON_00151 1e-99 ruvC 3.1.22.4 L Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
DNDENEON_00152 5.2e-128 yebC K transcriptional regulatory protein
DNDENEON_00153 3.5e-112 pgsA1 2.7.8.11, 2.7.8.5 I CDP-alcohol phosphatidyltransferase
DNDENEON_00154 0.0 thrS 6.1.1.3 J Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
DNDENEON_00155 1.6e-141 S Bacterial protein of unknown function (DUF881)
DNDENEON_00156 4.2e-45 sbp S Protein of unknown function (DUF1290)
DNDENEON_00157 2.6e-172 S Bacterial protein of unknown function (DUF881)
DNDENEON_00158 1e-102 pgsA 2.7.8.41, 2.7.8.5 I Belongs to the CDP-alcohol phosphatidyltransferase class-I family
DNDENEON_00159 1.1e-155 hisG 2.4.2.17 F ATP phosphoribosyltransferase
DNDENEON_00160 1.9e-40 hisE 3.5.4.19, 3.6.1.31, 5.3.1.16 E Phosphoribosyl-ATP pyrophosphohydrolase
DNDENEON_00161 4.2e-97 rpe 5.1.3.1 G Ribulose-phosphate 3-epimerase
DNDENEON_00162 4.6e-180 lgt 2.1.1.199 M Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
DNDENEON_00163 9.3e-161 trpA 4.2.1.20 E The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate
DNDENEON_00164 0.0 trpB 4.1.1.48, 4.2.1.20 E The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine
DNDENEON_00165 2.1e-293 trpE 4.1.3.27 E Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
DNDENEON_00166 3.1e-71 hisI 3.5.4.19, 3.6.1.31 E Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
DNDENEON_00167 3e-139 hisF 4.1.3.27 E IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit
DNDENEON_00168 3.2e-225 rlmN 2.1.1.192 J Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs
DNDENEON_00169 2.3e-176 cdsA 2.7.7.41, 2.7.7.67 I Cytidylyltransferase family
DNDENEON_00170 5.8e-92 frr J Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
DNDENEON_00171 2.6e-135 pyrH 2.7.4.22 F Catalyzes the reversible phosphorylation of UMP to UDP
DNDENEON_00173 5e-143 tsf J Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
DNDENEON_00174 1.9e-139 rpsB J Belongs to the universal ribosomal protein uS2 family
DNDENEON_00175 1.1e-83 def 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
DNDENEON_00176 0.0 fadD3 6.2.1.3 I long-chain-fatty acid CoA ligase
DNDENEON_00177 1.8e-121
DNDENEON_00178 1.5e-15 EGP Major facilitator Superfamily
DNDENEON_00179 8.5e-79 ulaE 5.1.3.22 G Xylose isomerase-like TIM barrel
DNDENEON_00180 3.6e-77 araD 4.1.2.17, 5.1.3.4 G Class II Aldolase and Adducin N-terminal domain
DNDENEON_00181 0.0 fadD 6.2.1.3 I AMP-binding enzyme
DNDENEON_00182 0.0 cydD V ABC transporter transmembrane region
DNDENEON_00183 2e-155 pdxS 4.3.3.6 H Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5-phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively
DNDENEON_00184 1e-128 pdxT 4.3.3.6 H Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS
DNDENEON_00185 9.1e-240 G Bacterial extracellular solute-binding protein
DNDENEON_00186 6.2e-155 G Binding-protein-dependent transport system inner membrane component
DNDENEON_00187 4.5e-167 G ABC transporter permease
DNDENEON_00188 0.0 bga1 3.2.1.23 G Psort location Cytoplasmic, score 8.87
DNDENEON_00189 8.9e-198 K helix_turn _helix lactose operon repressor
DNDENEON_00190 2.1e-241 mntH P H( )-stimulated, divalent metal cation uptake system
DNDENEON_00191 9.3e-166 dkgA 1.1.1.346 S Oxidoreductase, aldo keto reductase family protein
DNDENEON_00192 2.3e-115 L Protein of unknown function (DUF1524)
DNDENEON_00193 1.3e-243 T Diguanylate cyclase (GGDEF) domain protein
DNDENEON_00194 2.3e-284 EGP Major facilitator Superfamily
DNDENEON_00195 2.5e-47
DNDENEON_00196 9.3e-189 S Endonuclease/Exonuclease/phosphatase family
DNDENEON_00197 0.0 2.1.1.107, 2.1.1.294, 2.7.1.181, 2.7.11.1 H Protein of unknown function (DUF4012)
DNDENEON_00198 0.0 rfbP M Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase
DNDENEON_00199 2.2e-177
DNDENEON_00200 1.5e-31 O Subtilase family
DNDENEON_00201 1.4e-17 S enterobacterial common antigen metabolic process
DNDENEON_00202 4.6e-114 S enterobacterial common antigen metabolic process
DNDENEON_00203 3.1e-28 pslL G Acyltransferase family
DNDENEON_00204 1.8e-85
DNDENEON_00205 8.1e-69 M Glycosyltransferase, group 1 family protein
DNDENEON_00206 4.3e-79 H Hexapeptide repeat of succinyl-transferase
DNDENEON_00207 3.5e-90 2.4.1.166 GT2 M Glycosyltransferase like family 2
DNDENEON_00208 7.5e-175 cps2J S Polysaccharide biosynthesis protein
DNDENEON_00209 1.4e-135 lacL 3.2.1.23 G Psort location Cytoplasmic, score 8.87
DNDENEON_00210 1.1e-262 lacS G Psort location CytoplasmicMembrane, score 10.00
DNDENEON_00211 3.6e-210 GK ROK family
DNDENEON_00212 4.2e-242 G Bacterial extracellular solute-binding protein
DNDENEON_00213 2.9e-146 G Binding-protein-dependent transport system inner membrane component
DNDENEON_00214 4.4e-164 G ABC transporter permease
DNDENEON_00215 6.6e-173 2.7.1.2 GK ROK family
DNDENEON_00216 0.0 G Glycosyl hydrolase family 20, domain 2
DNDENEON_00217 1.2e-149 nagB 3.1.1.31, 3.5.99.6 G Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
DNDENEON_00218 4.6e-228 nagA 3.5.1.25 G Amidohydrolase family
DNDENEON_00219 1.9e-186 lacR K Transcriptional regulator, LacI family
DNDENEON_00220 0.0 T Diguanylate cyclase, GGDEF domain
DNDENEON_00221 1.7e-251 3.2.1.14 GH18 S Carbohydrate binding domain
DNDENEON_00222 0.0 M probably involved in cell wall
DNDENEON_00223 8.5e-234 M Protein of unknown function (DUF2961)
DNDENEON_00224 3.8e-156 I alpha/beta hydrolase fold
DNDENEON_00225 5e-27 S Psort location Cytoplasmic, score 8.87
DNDENEON_00226 3.1e-214 lipA I Hydrolase, alpha beta domain protein
DNDENEON_00227 0.0 mdlA2 V ABC transporter
DNDENEON_00228 0.0 yknV V ABC transporter
DNDENEON_00229 8e-126
DNDENEON_00230 0.0 rafA 3.2.1.22 G Psort location Cytoplasmic, score 8.87
DNDENEON_00231 1.4e-223 K helix_turn _helix lactose operon repressor
DNDENEON_00232 2.3e-233 G Alpha galactosidase A
DNDENEON_00233 0.0 G Alpha-L-arabinofuranosidase C-terminus
DNDENEON_00234 2.2e-184 tatD L TatD related DNase
DNDENEON_00235 0.0 kup P Transport of potassium into the cell
DNDENEON_00236 1e-167 S Glutamine amidotransferase domain
DNDENEON_00237 3.3e-149 T HD domain
DNDENEON_00238 1.6e-155 V ABC transporter
DNDENEON_00239 1.8e-240 V ABC transporter permease
DNDENEON_00240 0.0 S Psort location CytoplasmicMembrane, score 9.99
DNDENEON_00241 3.1e-11 K sequence-specific DNA binding
DNDENEON_00246 8.2e-61 L Belongs to the 'phage' integrase family
DNDENEON_00247 3.6e-64
DNDENEON_00248 6.8e-10
DNDENEON_00250 3.4e-14
DNDENEON_00252 6.8e-26 S Domain of unknown function (DUF3846)
DNDENEON_00253 8.7e-290 groL O Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
DNDENEON_00255 6.6e-124
DNDENEON_00256 2.6e-132 KT Response regulator receiver domain protein
DNDENEON_00257 0.0 2.7.13.3 T ATPase histidine kinase DNA gyrase B HSP90 domain protein
DNDENEON_00258 4.5e-67 cspB K 'Cold-shock' DNA-binding domain
DNDENEON_00259 1.2e-182 S Protein of unknown function (DUF3027)
DNDENEON_00260 4.6e-188 uspA T Belongs to the universal stress protein A family
DNDENEON_00261 0.0 clpC O ATPase family associated with various cellular activities (AAA)
DNDENEON_00262 1.3e-254 codA 3.5.4.1, 3.5.4.21 F Amidohydrolase family
DNDENEON_00263 1.6e-285 purR QT Purine catabolism regulatory protein-like family
DNDENEON_00264 4.2e-245 proP EGP Sugar (and other) transporter
DNDENEON_00265 4.6e-140 3.5.2.10 S Creatinine amidohydrolase
DNDENEON_00266 2.6e-216 3.1.26.12, 3.2.1.8 S Domain of Unknown Function (DUF349)
DNDENEON_00267 5.3e-251 hisS 6.1.1.21 J Histidyl-tRNA synthetase
DNDENEON_00268 0.0 aspS 6.1.1.12 J Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
DNDENEON_00269 1.3e-274 glnP E Binding-protein-dependent transport system inner membrane component
DNDENEON_00270 6.2e-137 glnQ 3.6.3.21 E ATPases associated with a variety of cellular activities
DNDENEON_00271 6.2e-137 gluA 3.6.3.21 E ATP-binding protein of ABC transporter for glutamate K02028
DNDENEON_00272 4e-153 gluB ET Belongs to the bacterial solute-binding protein 3 family
DNDENEON_00273 6.8e-111 gluC E Binding-protein-dependent transport system inner membrane component
DNDENEON_00274 1.5e-195 gluD E Binding-protein-dependent transport system inner membrane component
DNDENEON_00275 4.2e-186 2.7.4.1 S Polyphosphate kinase 2 (PPK2)
DNDENEON_00276 0.0 L DEAD DEAH box helicase
DNDENEON_00277 1.4e-248 rarA L Recombination factor protein RarA
DNDENEON_00278 4.8e-134 KT Transcriptional regulatory protein, C terminal
DNDENEON_00279 7.1e-287 mtrB 2.7.13.3 T HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
DNDENEON_00280 0.0 lpqB S Lipoprotein LpqB beta-propeller domain
DNDENEON_00281 2.4e-165 G Periplasmic binding protein domain
DNDENEON_00282 6e-288 ytfR 3.6.3.17 G ATPases associated with a variety of cellular activities
DNDENEON_00283 1.5e-181 ytfT U Branched-chain amino acid transport system / permease component
DNDENEON_00284 1.2e-172 yjfF U Branched-chain amino acid transport system / permease component
DNDENEON_00285 2.6e-251 EGP Major facilitator Superfamily
DNDENEON_00286 0.0 E ABC transporter, substrate-binding protein, family 5
DNDENEON_00287 1e-113 clpP 3.4.21.92 O Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
DNDENEON_00288 8.6e-125 clpP 3.4.21.92 O Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
DNDENEON_00289 6.1e-241 clpX O ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
DNDENEON_00291 7.1e-71 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
DNDENEON_00292 0.0 4.2.1.53 S MCRA family
DNDENEON_00293 3.3e-89 phoU P Plays a role in the regulation of phosphate uptake
DNDENEON_00294 1.4e-215 T ATPase histidine kinase DNA gyrase B HSP90 domain protein
DNDENEON_00295 1.5e-102 S Listeria-Bacteroides repeat domain (List_Bact_rpt)
DNDENEON_00296 2e-71 M Sortase family
DNDENEON_00297 4.2e-38 D nuclear chromosome segregation
DNDENEON_00300 4.8e-254 U Type IV secretory pathway, VirB4
DNDENEON_00303 7.6e-288 U TraM recognition site of TraD and TraG
DNDENEON_00309 4.4e-79 bcgIB 2.1.1.72, 3.1.21.3 V Type I restriction modification DNA specificity domain
DNDENEON_00310 7.9e-279 V N-6 DNA Methylase
DNDENEON_00311 2.7e-84 pin L Resolvase, N terminal domain
DNDENEON_00312 3.4e-61 V Psort location Cytoplasmic, score
DNDENEON_00313 6.1e-38
DNDENEON_00315 3.1e-42
DNDENEON_00317 1.2e-80
DNDENEON_00319 0.0 XK27_00500 KL Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
DNDENEON_00322 1e-19
DNDENEON_00324 3.8e-195 topB 5.99.1.2 L DNA topoisomerase
DNDENEON_00326 2.5e-76 XK27_08505 D nucleotidyltransferase activity
DNDENEON_00327 9.2e-37 yoeB S YoeB-like toxin of bacterial type II toxin-antitoxin system
DNDENEON_00328 2.7e-31 yefM 2.3.1.15 D Antitoxin component of a toxin-antitoxin (TA) module
DNDENEON_00329 6.6e-32
DNDENEON_00330 0.0 traA 3.1.11.5 L DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity
DNDENEON_00332 2.5e-81
DNDENEON_00333 2.8e-76 S Fic/DOC family
DNDENEON_00334 1.5e-54 L single-stranded DNA binding
DNDENEON_00338 6.6e-100 dnaQ 2.7.7.7 L Exonuclease, DNA polymerase III, epsilon subunit family
DNDENEON_00339 1.9e-95 S Protein of unknown function (DUF2786)
DNDENEON_00342 1.5e-09
DNDENEON_00344 2.1e-10 L Single-strand binding protein family
DNDENEON_00345 7.7e-291 recE 2.7.7.7, 3.6.4.12 L Psort location Cytoplasmic, score
DNDENEON_00346 5.2e-116 def 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
DNDENEON_00347 1e-254 glmM 5.4.2.10 G Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
DNDENEON_00348 0.0 eccCa D FtsK/SpoIIIE family
DNDENEON_00349 9.6e-157 T Forkhead associated domain
DNDENEON_00350 1e-191
DNDENEON_00351 4.4e-55
DNDENEON_00352 5.3e-187
DNDENEON_00353 1.2e-147
DNDENEON_00354 1.9e-198
DNDENEON_00355 0.0 O Subtilase family
DNDENEON_00357 1.5e-43 S Proteins of 100 residues with WXG
DNDENEON_00358 1.1e-47 esxU S Proteins of 100 residues with WXG
DNDENEON_00359 1.7e-225 snm S WXG100 protein secretion system (Wss), protein YukD
DNDENEON_00360 0.0 O Type VII secretion system ESX-1, transport TM domain B
DNDENEON_00361 5e-169
DNDENEON_00362 0.0 pepN 3.4.11.2 E Peptidase family M1 domain
DNDENEON_00364 0.0 rnj J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
DNDENEON_00365 5.2e-173 dapA 4.3.3.7 E Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
DNDENEON_00366 0.0 pacS 3.6.3.54 P E1-E2 ATPase
DNDENEON_00367 5.7e-38 csoR S Metal-sensitive transcriptional repressor
DNDENEON_00368 4.1e-133 dapB 1.17.1.8 E Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
DNDENEON_00369 8.8e-243 G Major Facilitator Superfamily
DNDENEON_00370 0.0 uvrD2 3.6.4.12 L Belongs to the helicase family. UvrD subfamily
DNDENEON_00371 0.0 uvrD 3.6.4.12 L PD-(D/E)XK nuclease superfamily
DNDENEON_00372 9.2e-259 KLT Protein tyrosine kinase
DNDENEON_00373 0.0 S Fibronectin type 3 domain
DNDENEON_00374 1.5e-224 S ATPase family associated with various cellular activities (AAA)
DNDENEON_00375 6.5e-218 S Protein of unknown function DUF58
DNDENEON_00376 0.0 E Transglutaminase-like superfamily
DNDENEON_00377 3.8e-162 3.1.3.16 T Sigma factor PP2C-like phosphatases
DNDENEON_00378 1.1e-102 B Belongs to the OprB family
DNDENEON_00379 1.1e-101 T Forkhead associated domain
DNDENEON_00380 0.0 rpoC 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
DNDENEON_00381 0.0 rpoB 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
DNDENEON_00382 6.8e-100
DNDENEON_00383 3.5e-182 mutY 2.1.1.37, 2.1.3.15, 6.4.1.2 L FES
DNDENEON_00384 1.3e-125 trmL 2.1.1.207 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
DNDENEON_00385 1.8e-251 S UPF0210 protein
DNDENEON_00386 7.1e-43 gcvR T Belongs to the UPF0237 family
DNDENEON_00387 0.0 cscA 3.2.1.26 GH32 G Belongs to the glycosyl hydrolase 32 family
DNDENEON_00388 7.9e-194 K helix_turn _helix lactose operon repressor
DNDENEON_00389 1.3e-122 S Protein of unknown function, DUF624
DNDENEON_00390 9e-170 G Binding-protein-dependent transport system inner membrane component
DNDENEON_00391 3.2e-178 G Binding-protein-dependent transport system inner membrane component
DNDENEON_00392 2.1e-307 G Bacterial extracellular solute-binding protein
DNDENEON_00393 2.9e-232 galK 2.7.1.6, 2.7.7.12 G Belongs to the GHMP kinase family. GalK subfamily
DNDENEON_00394 6.8e-250 galT 2.7.7.12 C Galactose-1-phosphate uridyl transferase, N-terminal domain
DNDENEON_00395 3.4e-141 glpR K DeoR C terminal sensor domain
DNDENEON_00396 8.8e-228 pyrD 1.3.1.14, 1.3.5.2, 1.3.98.1 F Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor
DNDENEON_00397 3e-220 namA 1.6.99.1 C NADH:flavin oxidoreductase / NADH oxidase family
DNDENEON_00398 0.0 pon1 2.4.1.129, 3.4.16.4 GT51 M Transglycosylase
DNDENEON_00399 5.2e-133 glxR K helix_turn_helix, cAMP Regulatory protein
DNDENEON_00400 1.9e-214 lplA 6.3.1.20 H Biotin/lipoate A/B protein ligase family
DNDENEON_00401 1.7e-81 J TM2 domain
DNDENEON_00402 2.2e-193 leuB 1.1.1.85 CE Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate
DNDENEON_00403 0.0 ptrB 3.4.21.83 E Peptidase, S9A B C family, catalytic domain protein
DNDENEON_00404 1.5e-236 S Uncharacterized conserved protein (DUF2183)
DNDENEON_00405 1e-69 gcvH E The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein
DNDENEON_00406 9.6e-208 nudC 1.3.7.1, 3.6.1.22 L NADH pyrophosphatase zinc ribbon domain
DNDENEON_00407 3.4e-160 mhpC I Alpha/beta hydrolase family
DNDENEON_00408 1.3e-113 F Domain of unknown function (DUF4916)
DNDENEON_00409 6e-61 trxA 1.8.1.8, 1.8.1.9 O Belongs to the thioredoxin family
DNDENEON_00410 5.6e-170 S G5
DNDENEON_00411 2.1e-88
DNDENEON_00412 0.0 amyE 3.2.1.1 GH13 G Belongs to the glycosyl hydrolase 13 family
DNDENEON_00413 1.3e-223 C Polysaccharide pyruvyl transferase
DNDENEON_00414 2.3e-209 GT2 M Glycosyltransferase like family 2
DNDENEON_00415 1.9e-192 1.13.11.79 C Psort location Cytoplasmic, score 8.87
DNDENEON_00416 3e-206 wbbI M transferase activity, transferring glycosyl groups
DNDENEON_00417 1.9e-284 S Psort location CytoplasmicMembrane, score 9.99
DNDENEON_00418 4.6e-255 S Psort location CytoplasmicMembrane, score 9.99
DNDENEON_00419 2.4e-189 2.4.1.166 GT2 M Glycosyltransferase like family 2
DNDENEON_00420 1.8e-158 cps1D M Domain of unknown function (DUF4422)
DNDENEON_00421 0.0 amyE 3.2.1.1 GH13 G Belongs to the glycosyl hydrolase 13 family
DNDENEON_00423 1.5e-71
DNDENEON_00424 1.6e-28 K Cro/C1-type HTH DNA-binding domain
DNDENEON_00425 6.5e-74
DNDENEON_00426 4.1e-95 3.1.3.48 T Low molecular weight phosphatase family
DNDENEON_00427 7.2e-246 wcoI DM Psort location CytoplasmicMembrane, score
DNDENEON_00428 0.0 3.2.1.20 GH31 G Belongs to the glycosyl hydrolase 31 family
DNDENEON_00429 6.5e-148 P Binding-protein-dependent transport system inner membrane component
DNDENEON_00430 5e-162 P Binding-protein-dependent transport system inner membrane component
DNDENEON_00431 3e-270 G Bacterial extracellular solute-binding protein
DNDENEON_00432 1.4e-184 K Psort location Cytoplasmic, score
DNDENEON_00433 9.8e-183 K helix_turn _helix lactose operon repressor
DNDENEON_00434 1.1e-222 G Bacterial extracellular solute-binding protein
DNDENEON_00435 3.9e-162 G PFAM binding-protein-dependent transport systems inner membrane component
DNDENEON_00436 6.6e-145 G Binding-protein-dependent transport system inner membrane component
DNDENEON_00437 0.0 3.2.1.177 GH31 G Belongs to the glycosyl hydrolase 31 family
DNDENEON_00438 1.7e-55 yccF S Inner membrane component domain
DNDENEON_00439 2e-103
DNDENEON_00440 2.6e-40 S enterobacterial common antigen metabolic process
DNDENEON_00441 3.4e-116 S enterobacterial common antigen metabolic process
DNDENEON_00442 8e-194 1.12.98.1 C Coenzyme F420 hydrogenase/dehydrogenase, beta subunit N-term
DNDENEON_00443 2.4e-83 1.13.11.79 C Psort location Cytoplasmic, score 8.87
DNDENEON_00444 4.6e-107 S Psort location CytoplasmicMembrane, score
DNDENEON_00445 2.5e-55 pssF M Glycosyltransferase like family 2
DNDENEON_00446 2e-10 M Psort location CytoplasmicMembrane, score 9.99
DNDENEON_00447 1.2e-64 M Polysaccharide pyruvyl transferase
DNDENEON_00448 4.5e-34 epsJ GT2 S group 2 family protein
DNDENEON_00449 6.3e-129 MA20_43635 M Capsular polysaccharide synthesis protein
DNDENEON_00450 6.3e-204 M Glycosyl transferase 4-like domain
DNDENEON_00451 2.6e-216 M Domain of unknown function (DUF1972)
DNDENEON_00452 2.1e-194 GT4 M Psort location Cytoplasmic, score 8.87
DNDENEON_00453 3.2e-239 MA20_17390 GT4 M Glycosyl transferases group 1
DNDENEON_00454 5.7e-85 K Cro/C1-type HTH DNA-binding domain
DNDENEON_00455 0.0 pacL2 3.6.3.8 P Cation transporter/ATPase, N-terminus
DNDENEON_00456 8e-221 lacL 3.2.1.23 G Psort location Cytoplasmic, score 8.87
DNDENEON_00457 8.9e-125 L Phage integrase family
DNDENEON_00458 6.3e-38
DNDENEON_00466 3.5e-11
DNDENEON_00469 3.6e-10
DNDENEON_00471 8.8e-79 L helicase
DNDENEON_00473 2e-88 pin L Resolvase, N terminal domain
DNDENEON_00474 4e-80
DNDENEON_00475 1.2e-63 V Restriction endonuclease
DNDENEON_00478 1.7e-55 3.1.21.3 V Type I restriction modification DNA specificity domain
DNDENEON_00479 6.4e-137 recQ 3.6.4.12, 5.99.1.2 F RecQ zinc-binding
DNDENEON_00481 1e-11 L Psort location Cytoplasmic, score
DNDENEON_00486 3.1e-24
DNDENEON_00488 6.3e-17 M cell wall binding repeat
DNDENEON_00490 3.3e-308 pepD E Peptidase family C69
DNDENEON_00491 4e-195 XK27_01805 M Glycosyltransferase like family 2
DNDENEON_00493 4.9e-108 icaR K Bacterial regulatory proteins, tetR family
DNDENEON_00495 8.6e-168 ftsY U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
DNDENEON_00496 4.5e-236 amt U Ammonium Transporter Family
DNDENEON_00497 1e-54 glnB K Nitrogen regulatory protein P-II
DNDENEON_00498 0.0 2.7.7.19, 2.7.7.59 O Nucleotidyltransferase domain
DNDENEON_00499 1.2e-245 dnaB 3.6.4.12 L Participates in initiation and elongation during chromosome replication
DNDENEON_00500 1.7e-242 murD 3.4.21.10, 6.3.2.13, 6.3.2.9 M Domain of unknown function (DUF1727)
DNDENEON_00501 2.1e-137 cobQ S CobB/CobQ-like glutamine amidotransferase domain
DNDENEON_00502 4.2e-26 S granule-associated protein
DNDENEON_00503 0.0 ubiB S ABC1 family
DNDENEON_00504 4.1e-192 K Periplasmic binding protein domain
DNDENEON_00505 1.1e-242 G Bacterial extracellular solute-binding protein
DNDENEON_00506 3e-08 P Binding-protein-dependent transport system inner membrane component
DNDENEON_00507 3.1e-167 P Binding-protein-dependent transport system inner membrane component
DNDENEON_00508 9.3e-147 G Binding-protein-dependent transport system inner membrane component
DNDENEON_00509 0.0 3.2.1.185 GH127 S Beta-L-arabinofuranosidase, GH127
DNDENEON_00510 0.0 sca1 3.2.1.187 GH121 DG Bacterial Ig-like domain (group 4)
DNDENEON_00511 0.0 G Bacterial Ig-like domain (group 4)
DNDENEON_00512 2.7e-207 ugpQ 3.1.4.46 C Glycerophosphoryl diester phosphodiesterase family
DNDENEON_00513 2.7e-117 upp 2.4.2.9 F Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
DNDENEON_00514 3.9e-91
DNDENEON_00515 1e-223 mutT 3.6.1.13, 3.6.1.55 LT Phosphoglycerate mutase family
DNDENEON_00516 0.0 ppk 2.7.4.1 P Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
DNDENEON_00518 5.5e-141 cpaE D bacterial-type flagellum organization
DNDENEON_00519 2.7e-185 cpaF U Type II IV secretion system protein
DNDENEON_00520 1.4e-125 U Type ii secretion system
DNDENEON_00521 1.7e-88 gspF NU Type II secretion system (T2SS), protein F
DNDENEON_00522 1.3e-42 S Protein of unknown function (DUF4244)
DNDENEON_00523 5.1e-60 U TadE-like protein
DNDENEON_00524 5.2e-55 S TIGRFAM helicase secretion neighborhood TadE-like protein
DNDENEON_00525 1.9e-214 dagK 2.7.1.107 I Diacylglycerol kinase catalytic domain protein
DNDENEON_00526 6e-193 S Psort location CytoplasmicMembrane, score
DNDENEON_00527 4.2e-96 K Bacterial regulatory proteins, tetR family
DNDENEON_00528 0.0 dnaX 2.7.7.7 L DNA polymerase III subunit gamma tau
DNDENEON_00529 2.2e-105 recR L May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
DNDENEON_00530 3.4e-135 ask 1.1.1.3, 2.7.2.4 E Amino acid kinase family
DNDENEON_00531 1.4e-96 askB 1.1.1.3, 2.7.2.4 E ACT domain
DNDENEON_00532 1.8e-209 asd 1.2.1.11, 1.2.1.12 E Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
DNDENEON_00533 9.9e-67
DNDENEON_00534 4.8e-31
DNDENEON_00535 4e-45 K helix_turn_helix, Lux Regulon
DNDENEON_00536 2.1e-33 2.7.13.3 T Histidine kinase
DNDENEON_00537 2.4e-115
DNDENEON_00538 1.5e-302 S Calcineurin-like phosphoesterase
DNDENEON_00539 0.0 leuA 2.3.3.13 E Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
DNDENEON_00540 0.0 3.2.1.99 GH43 G C-terminal of Glycosyl hydrolases family 43
DNDENEON_00541 7.9e-256 3.2.1.99 GH43 G C-terminal of Glycosyl hydrolases family 43
DNDENEON_00542 0.0 3.2.1.97 GH101 G Glycosyl hydrolases family 43
DNDENEON_00543 2.7e-194 K helix_turn _helix lactose operon repressor
DNDENEON_00544 1.3e-203 abf G Glycosyl hydrolases family 43
DNDENEON_00545 1.1e-292 G Bacterial extracellular solute-binding protein
DNDENEON_00546 4.6e-169 G Binding-protein-dependent transport system inner membrane component
DNDENEON_00547 1.7e-163 G Binding-protein-dependent transport system inner membrane component
DNDENEON_00548 1.9e-184 G beta-fructofuranosidase activity
DNDENEON_00549 8.5e-101 S Protein of unknown function, DUF624
DNDENEON_00550 1.1e-25 S Beta-L-arabinofuranosidase, GH127
DNDENEON_00551 0.0 mrcB 2.4.1.129, 3.4.16.4 GT51 M Transglycosylase
DNDENEON_00552 2.7e-216 ino1 5.5.1.4 I Myo-inositol-1-phosphate synthase
DNDENEON_00553 1.2e-235 glf 5.4.99.9 M UDP-galactopyranose mutase
DNDENEON_00554 8.7e-191 3.6.1.27 I PAP2 superfamily
DNDENEON_00555 0.0 topA 5.99.1.2 L Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
DNDENEON_00556 9.2e-113 tmk 2.7.4.9 F Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
DNDENEON_00557 5.4e-193 holB 2.7.7.7 L DNA polymerase III
DNDENEON_00558 4.9e-185 K helix_turn _helix lactose operon repressor
DNDENEON_00559 6e-39 ptsH G PTS HPr component phosphorylation site
DNDENEON_00560 4.6e-286 ptsI 2.7.3.9 G General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
DNDENEON_00561 1.1e-106 S Phosphatidylethanolamine-binding protein
DNDENEON_00562 0.0 pepD E Peptidase family C69
DNDENEON_00563 9.1e-289 fhs 1.5.1.5, 3.5.4.9, 6.3.4.3 F Formate-tetrahydrofolate ligase
DNDENEON_00564 6.7e-62 S Macrophage migration inhibitory factor (MIF)
DNDENEON_00565 7.1e-95 S GtrA-like protein
DNDENEON_00566 6.1e-263 EGP Major facilitator Superfamily
DNDENEON_00567 1.5e-123 3.1.3.3, 3.1.3.73 G Phosphoglycerate mutase family
DNDENEON_00568 9.2e-184
DNDENEON_00569 5.2e-105 S Protein of unknown function (DUF805)
DNDENEON_00570 5.5e-297 gltX 6.1.1.17 J Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
DNDENEON_00573 3e-268 S Calcineurin-like phosphoesterase
DNDENEON_00574 1.1e-139 ltbR K Transcriptional regulator, IclR family, C-terminal domain protein
DNDENEON_00575 7.1e-272 leuC 4.2.1.33, 4.2.1.35 E Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
DNDENEON_00576 1.3e-131 leuD 4.2.1.33, 4.2.1.35 E Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
DNDENEON_00577 3.6e-200 pyrD 1.3.1.14, 1.3.98.1 F Dihydroorotate dehydrogenase
DNDENEON_00578 1e-256 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
DNDENEON_00579 2.1e-173 plsC2 2.3.1.51 I Phosphate acyltransferases
DNDENEON_00580 1.7e-179 gpsA 1.1.1.94 I NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus
DNDENEON_00581 3.8e-215 ddl 6.3.2.4 F Belongs to the D-alanine--D-alanine ligase family
DNDENEON_00582 5.5e-174 S CAAX protease self-immunity
DNDENEON_00583 1.7e-137 M Mechanosensitive ion channel
DNDENEON_00584 5.9e-230 MA20_36090 S Psort location Cytoplasmic, score 8.87
DNDENEON_00585 2.4e-228 MA20_36090 S Psort location Cytoplasmic, score 8.87
DNDENEON_00586 6.3e-125 K Bacterial regulatory proteins, tetR family
DNDENEON_00587 7.5e-230 yhdR 2.6.1.1 E Psort location Cytoplasmic, score 8.87
DNDENEON_00588 5.2e-167 gnd 1.1.1.343, 1.1.1.44 G 6-phosphogluconate dehydrogenase, C-terminal domain
DNDENEON_00590 1.3e-227 gnuT EG GntP family permease
DNDENEON_00591 2.8e-83 gntK 2.7.1.12 F Shikimate kinase
DNDENEON_00592 1.9e-127 gntR K FCD
DNDENEON_00593 4.9e-230 yxiO S Vacuole effluxer Atg22 like
DNDENEON_00594 0.0 S Psort location Cytoplasmic, score 8.87
DNDENEON_00595 8.4e-30 rpmB J Ribosomal L28 family
DNDENEON_00596 0.0 recG 3.6.4.12 L helicase superfamily c-terminal domain
DNDENEON_00597 2.4e-91 rsmD 2.1.1.171 L Conserved hypothetical protein 95
DNDENEON_00598 1.5e-90 K helix_turn_helix, arabinose operon control protein
DNDENEON_00599 3.2e-138 uhpT EGP Major facilitator Superfamily
DNDENEON_00600 2.1e-148 I alpha/beta hydrolase fold
DNDENEON_00601 1e-147 trmD 2.1.1.228, 4.6.1.12 J Belongs to the RNA methyltransferase TrmD family
DNDENEON_00602 8e-108 rimM J An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
DNDENEON_00603 1.8e-34 CP_0960 S Belongs to the UPF0109 family
DNDENEON_00604 3.9e-54 rpsP J Belongs to the bacterial ribosomal protein bS16 family
DNDENEON_00605 2.6e-178 S Endonuclease/Exonuclease/phosphatase family
DNDENEON_00606 3.5e-270 ffh 3.6.5.4 U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
DNDENEON_00607 3.5e-302 cysS 6.1.1.16 J Belongs to the class-I aminoacyl-tRNA synthetase family
DNDENEON_00608 1.8e-150 guaA1 6.3.5.2 F Peptidase C26
DNDENEON_00609 0.0 yjjK S ABC transporter
DNDENEON_00610 4.2e-95
DNDENEON_00612 5.7e-92 ilvN 2.2.1.6 E ACT domain
DNDENEON_00613 0.0 ilvB 2.2.1.6 H Thiamine pyrophosphate enzyme, central domain
DNDENEON_00614 1.7e-135 rnc 3.1.26.3 J Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
DNDENEON_00615 1e-19 rpmF J Belongs to the bacterial ribosomal protein bL32 family
DNDENEON_00616 1.8e-113 yceD S Uncharacterized ACR, COG1399
DNDENEON_00617 1.9e-133
DNDENEON_00618 1e-87 coaD 2.7.7.3 H Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
DNDENEON_00619 7.2e-58 S Protein of unknown function (DUF3039)
DNDENEON_00620 1.7e-195 yghZ C Aldo/keto reductase family
DNDENEON_00621 3.2e-77 soxR K MerR, DNA binding
DNDENEON_00622 1.2e-120 rdgB 3.6.1.66, 5.1.1.3 F Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
DNDENEON_00623 1.9e-138 rph 2.7.7.56, 3.6.1.66 J Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
DNDENEON_00624 1.5e-250 pncB 6.3.4.21 F Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
DNDENEON_00625 8.2e-243 murN 2.3.2.16 V Psort location Cytoplasmic, score 8.87
DNDENEON_00626 3.1e-221 murN 2.3.2.16 V Psort location Cytoplasmic, score 8.87
DNDENEON_00629 5.4e-181 S Auxin Efflux Carrier
DNDENEON_00630 0.0 pgi 5.3.1.9 G Belongs to the GPI family
DNDENEON_00631 1.5e-59 rplS J This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
DNDENEON_00632 6.7e-116 lepB 3.4.21.89 U Belongs to the peptidase S26 family
DNDENEON_00633 1.5e-115 rnhB 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
DNDENEON_00634 5e-128 V ATPases associated with a variety of cellular activities
DNDENEON_00635 2.5e-270 V Efflux ABC transporter, permease protein
DNDENEON_00636 2.7e-166 mdcF S Transporter, auxin efflux carrier (AEC) family protein
DNDENEON_00637 3.1e-231 dapE 3.5.1.18 E Peptidase dimerisation domain
DNDENEON_00638 4.3e-308 rne 3.1.26.12 J Ribonuclease E/G family
DNDENEON_00639 2.4e-47 rplU J This protein binds to 23S rRNA in the presence of protein L20
DNDENEON_00640 2.6e-39 rpmA J Ribosomal L27 protein
DNDENEON_00641 2.3e-311 obg S An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
DNDENEON_00642 1e-204 proB 2.7.2.11 E Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
DNDENEON_00643 9.7e-233 aspC E DegT/DnrJ/EryC1/StrS aminotransferase family
DNDENEON_00645 1.2e-32 secE U Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
DNDENEON_00646 4.2e-128 nusG K Participates in transcription elongation, termination and antitermination
DNDENEON_00647 2.3e-72 rplK J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
DNDENEON_00648 3e-122 rplA J Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
DNDENEON_00649 5.9e-143 QT PucR C-terminal helix-turn-helix domain
DNDENEON_00650 0.0
DNDENEON_00651 1.3e-162 birA 2.7.1.33, 6.3.4.15 H Biotin/lipoate A/B protein ligase family
DNDENEON_00652 6e-79 bioY S BioY family
DNDENEON_00653 0.0 accA 6.3.4.14, 6.4.1.2, 6.4.1.3 I Carbamoyl-phosphate synthase L chain, ATP binding domain protein
DNDENEON_00654 0.0 pccB I Carboxyl transferase domain
DNDENEON_00655 0.0 fas 2.3.1.179 I Beta-ketoacyl synthase, C-terminal domain
DNDENEON_00657 1.2e-82 acpS 2.7.8.7, 3.2.1.52 I Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
DNDENEON_00658 0.0 ams 2.4.1.4, 3.2.1.1, 5.4.99.16 GH13 G Alpha amylase, catalytic domain
DNDENEON_00660 2.4e-116
DNDENEON_00661 1.7e-41 rpsO J Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
DNDENEON_00662 0.0 pnp 2.7.7.8 J Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction
DNDENEON_00663 8.5e-91 lemA S LemA family
DNDENEON_00664 0.0 S Predicted membrane protein (DUF2207)
DNDENEON_00665 9.7e-171 1.1.1.65 C Oxidoreductase, aldo keto reductase family protein
DNDENEON_00666 3.9e-295 yegQ O Peptidase family U32 C-terminal domain
DNDENEON_00667 4.1e-184 yfiH Q Multi-copper polyphenol oxidoreductase laccase
DNDENEON_00668 2.5e-144 ispD 1.1.1.405, 2.7.7.40, 2.7.7.60, 4.6.1.12 I Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP)
DNDENEON_00669 3.4e-126 pcp 3.4.19.3 O Removes 5-oxoproline from various penultimate amino acid residues except L-proline
DNDENEON_00670 1.3e-58 D nuclear chromosome segregation
DNDENEON_00671 1.5e-266 pepC 3.4.22.40 E Peptidase C1-like family
DNDENEON_00672 3.3e-211 aroG 2.5.1.54 E Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
DNDENEON_00673 1.3e-221 aroG 2.5.1.54 E Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
DNDENEON_00674 1.8e-122 mtnN 3.2.2.9 E Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
DNDENEON_00675 5.3e-219 senX3 2.7.13.3 T His Kinase A (phosphoacceptor) domain
DNDENEON_00676 3.4e-129 KT Transcriptional regulatory protein, C terminal
DNDENEON_00677 1.6e-197 pstS P Part of the ABC transporter complex PstSACB involved in phosphate import
DNDENEON_00678 1.3e-163 pstC P probably responsible for the translocation of the substrate across the membrane
DNDENEON_00679 4e-168 pstA P Phosphate transport system permease
DNDENEON_00680 3.6e-148 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
DNDENEON_00681 1.2e-144 P Zinc-uptake complex component A periplasmic
DNDENEON_00682 1.3e-246 pbuO S Permease family
DNDENEON_00683 1.1e-87 rplJ J Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
DNDENEON_00684 2.4e-36 rplL J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
DNDENEON_00685 5.6e-176 T Forkhead associated domain
DNDENEON_00686 0.0 L Superfamily I DNA and RNA helicases and helicase subunits
DNDENEON_00687 4.8e-36
DNDENEON_00688 1.9e-92 flgA NO SAF
DNDENEON_00689 6.1e-30 fmdB S Putative regulatory protein
DNDENEON_00690 4e-100 fthC 6.3.3.2 H 5-formyltetrahydrofolate cyclo-ligase family
DNDENEON_00691 2.9e-122 rimJ 2.3.1.128 J Acetyltransferase (GNAT) domain
DNDENEON_00692 1.6e-147
DNDENEON_00693 2.5e-46 groS O Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
DNDENEON_00697 5.5e-25 rpmG J Ribosomal protein L33
DNDENEON_00698 7.6e-206 murB 1.3.1.98 M Cell wall formation
DNDENEON_00699 2.1e-266 E aromatic amino acid transport protein AroP K03293
DNDENEON_00700 8.3e-59 fdxA C 4Fe-4S binding domain
DNDENEON_00701 8.6e-207 dapC E Aminotransferase class I and II
DNDENEON_00702 1.1e-35 3.1.1.53 G Glycosyl hydrolase family 2, sugar binding domain protein
DNDENEON_00703 0.0 E Bacterial extracellular solute-binding proteins, family 5 Middle
DNDENEON_00704 7.7e-180 EP Binding-protein-dependent transport system inner membrane component
DNDENEON_00705 3.9e-141 EP Binding-protein-dependent transport system inner membrane component
DNDENEON_00706 6.7e-156 oppD EP Oligopeptide/dipeptide transporter, C-terminal region
DNDENEON_00707 2.8e-151 dppF E ABC transporter
DNDENEON_00708 0.0 xynB 3.2.1.37 GH43 G Belongs to the glycosyl hydrolase 43 family
DNDENEON_00709 0.0 G Psort location Cytoplasmic, score 8.87
DNDENEON_00710 4.1e-233 3.2.1.156 GH8 G CBM9 module, glycoside hydrolase family 8 protein and carbohydrate esterase family 4 protein K01238
DNDENEON_00711 0.0 G candidate polyfunctional acetylxylan esterase b-xylosidase A-L-arabinofuranosidase, CBM9 module, glycoside hydrolase family 43 protein and carbohydrate esterase family 6 protein K01238
DNDENEON_00712 1e-292 CE10 I Belongs to the type-B carboxylesterase lipase family
DNDENEON_00714 4.4e-223 dinB 2.7.7.7 L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
DNDENEON_00715 5.2e-251 M Bacterial capsule synthesis protein PGA_cap
DNDENEON_00716 3.9e-184 MA20_16500 1.1.1.399, 1.1.1.95 EH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
DNDENEON_00717 2.1e-114 yigZ 2.1.1.45, 3.4.13.9 S Uncharacterized protein family UPF0029
DNDENEON_00718 6.9e-122
DNDENEON_00719 0.0 malQ 2.4.1.18, 2.4.1.25, 3.2.1.196, 5.4.99.15 CBM48,GH13,GH77 G 4-alpha-glucanotransferase
DNDENEON_00720 2.4e-80 rplM J This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
DNDENEON_00721 3.4e-67 rpsI J Belongs to the universal ribosomal protein uS9 family
DNDENEON_00722 0.0 glgX 3.2.1.196, 3.2.1.68 CBM48,GH13 G Belongs to the glycosyl hydrolase 13 family
DNDENEON_00723 1.4e-76 4.4.1.5 E Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
DNDENEON_00724 2e-216 2.7.1.2 GK transcriptional repressor of nag (N-acetylglucosamine) operon K02565
DNDENEON_00725 4.2e-239 EGP Major facilitator Superfamily
DNDENEON_00726 9.5e-197 Z012_01000 1.1.1.14, 1.1.1.9 C Zinc-binding dehydrogenase
DNDENEON_00727 1.6e-182 rhaR_1 K helix_turn_helix, arabinose operon control protein
DNDENEON_00728 0.0 adhE 1.1.1.1, 1.2.1.10 C belongs to the iron- containing alcohol dehydrogenase family
DNDENEON_00729 5.2e-50 rpsJ J Involved in the binding of tRNA to the ribosomes
DNDENEON_00730 2.3e-116 rplC J One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
DNDENEON_00731 1.4e-116 rplD J Forms part of the polypeptide exit tunnel
DNDENEON_00732 6.8e-47 rplW J One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
DNDENEON_00733 6.1e-154 rplB J One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
DNDENEON_00734 1.3e-47 rpsS J Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
DNDENEON_00735 1.9e-56 rplV J The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
DNDENEON_00736 1e-97 rpsC J Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
DNDENEON_00737 1.7e-75 rplP J Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
DNDENEON_00738 5e-38 rpmC J Belongs to the universal ribosomal protein uL29 family
DNDENEON_00739 4.9e-41 rpsQ J One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
DNDENEON_00740 3e-60 rplN J Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
DNDENEON_00741 8.7e-51 rplX J One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
DNDENEON_00742 7.5e-103 rplE J This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
DNDENEON_00743 2.5e-15 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
DNDENEON_00744 5.5e-68 rpsH J One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
DNDENEON_00745 3.8e-96 rplF J This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
DNDENEON_00746 3.3e-59 rplR J This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
DNDENEON_00747 1.2e-92 rpsE J Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
DNDENEON_00748 3.4e-25 rpmD J Ribosomal protein L30p/L7e
DNDENEON_00749 9.8e-74 rplO J binds to the 23S rRNA
DNDENEON_00750 3.8e-238 secY U The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
DNDENEON_00751 5.5e-98 adk 2.7.4.3 F Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
DNDENEON_00752 1.6e-32 infA J One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
DNDENEON_00753 8.4e-14 rpmJ J Belongs to the bacterial ribosomal protein bL36 family
DNDENEON_00754 3.3e-62 rpsM J Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
DNDENEON_00755 1.9e-65 rpsK J Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
DNDENEON_00756 4.7e-185 rpoA 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
DNDENEON_00757 1.3e-66 rplQ J Ribosomal protein L17
DNDENEON_00758 1.8e-184 truA 5.4.99.12 J Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
DNDENEON_00760 4.4e-78
DNDENEON_00761 6.1e-191 nusA K Participates in both transcription termination and antitermination
DNDENEON_00762 0.0 infB J One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
DNDENEON_00763 2.2e-69 rbfA J One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
DNDENEON_00764 2.5e-187 truB 5.4.99.25 J Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
DNDENEON_00765 1.8e-218 ribF 2.7.1.26, 2.7.7.2 H riboflavin kinase
DNDENEON_00766 4.1e-251 radA O DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
DNDENEON_00767 3.8e-108
DNDENEON_00769 2.4e-127 rpiA 2.7.1.12, 5.3.1.6 G Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
DNDENEON_00770 5.1e-213 rnhA 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
DNDENEON_00771 7.4e-250 T GHKL domain
DNDENEON_00772 2.8e-151 T LytTr DNA-binding domain
DNDENEON_00773 0.0 pgm 5.4.2.2 G Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
DNDENEON_00774 0.0 crr G pts system, glucose-specific IIABC component
DNDENEON_00775 2.8e-157 arbG K CAT RNA binding domain
DNDENEON_00776 8.3e-199 I Diacylglycerol kinase catalytic domain
DNDENEON_00777 9.2e-242 serS 6.1.1.11 J Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
DNDENEON_00779 4.6e-188 yegU O ADP-ribosylglycohydrolase
DNDENEON_00780 1.9e-189 yegV G pfkB family carbohydrate kinase
DNDENEON_00781 2.4e-270 U Permease for cytosine/purines, uracil, thiamine, allantoin
DNDENEON_00782 1.5e-103 Q Isochorismatase family
DNDENEON_00783 2.3e-214 S Choline/ethanolamine kinase
DNDENEON_00784 2.5e-275 eat E Amino acid permease
DNDENEON_00785 5.3e-264 gabT 2.6.1.19, 2.6.1.22 H Aminotransferase class-III
DNDENEON_00786 5.6e-141 yidP K UTRA
DNDENEON_00787 5.6e-121 degU K helix_turn_helix, Lux Regulon
DNDENEON_00788 1.8e-271 tcsS3 KT PspC domain
DNDENEON_00789 3.4e-147 pspC KT PspC domain
DNDENEON_00790 2.7e-92
DNDENEON_00791 4.4e-115 S Protein of unknown function (DUF4125)
DNDENEON_00792 0.0 S Domain of unknown function (DUF4037)
DNDENEON_00793 2.6e-214 araJ EGP Major facilitator Superfamily
DNDENEON_00795 0.0 lysS 6.1.1.6 J Belongs to the class-II aminoacyl-tRNA synthetase family
DNDENEON_00796 1.1e-192 K helix_turn _helix lactose operon repressor
DNDENEON_00797 8.8e-251 G Psort location CytoplasmicMembrane, score 10.00
DNDENEON_00798 4.1e-99 S Serine aminopeptidase, S33
DNDENEON_00799 2.5e-206 menA 2.5.1.74 H Belongs to the MenA family. Type 1 subfamily
DNDENEON_00800 4.3e-132 plsC2 2.3.1.51 I Phosphate acyltransferases
DNDENEON_00801 1.3e-97
DNDENEON_00802 3.4e-194 trpD 2.4.2.18, 4.1.3.27 F Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
DNDENEON_00803 0.0 secA U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
DNDENEON_00804 3.3e-118 hpf J Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
DNDENEON_00805 1.7e-122 recX S Modulates RecA activity
DNDENEON_00806 5.4e-212 recA L Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
DNDENEON_00807 4.3e-46 S Protein of unknown function (DUF3046)
DNDENEON_00808 1.6e-80 K Helix-turn-helix XRE-family like proteins
DNDENEON_00809 5.5e-98 cinA 3.5.1.42 S Belongs to the CinA family
DNDENEON_00810 4.1e-124 pgsA 2.7.8.41, 2.7.8.5 I Belongs to the CDP-alcohol phosphatidyltransferase class-I family
DNDENEON_00811 0.0 ftsK D FtsK SpoIIIE family protein
DNDENEON_00812 1.9e-192 miaA 2.5.1.75 F Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
DNDENEON_00813 1e-281 miaB 2.8.4.3 H Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
DNDENEON_00814 4.2e-155 relA2 2.7.6.5 S Region found in RelA / SpoT proteins
DNDENEON_00815 8e-177 ydeD EG EamA-like transporter family
DNDENEON_00816 1.7e-127 ybhL S Belongs to the BI1 family
DNDENEON_00817 6.7e-60 S Domain of unknown function (DUF5067)
DNDENEON_00818 5.1e-243 T Histidine kinase
DNDENEON_00819 1.8e-127 K helix_turn_helix, Lux Regulon
DNDENEON_00820 0.0 S Protein of unknown function DUF262
DNDENEON_00821 5.8e-115 K helix_turn_helix, Lux Regulon
DNDENEON_00822 7.2e-245 T Histidine kinase
DNDENEON_00823 2.9e-190 V ATPases associated with a variety of cellular activities
DNDENEON_00824 2.9e-224 V ABC-2 family transporter protein
DNDENEON_00825 8.9e-229 V ABC-2 family transporter protein
DNDENEON_00826 2.2e-209 rhaR1 K helix_turn_helix, arabinose operon control protein
DNDENEON_00827 5.2e-108 maa 2.3.1.18, 2.3.1.79 S Bacterial transferase hexapeptide repeat protein
DNDENEON_00828 9.9e-250 VP1224 V Psort location CytoplasmicMembrane, score 9.99
DNDENEON_00829 0.0 acnA 4.2.1.3 C Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
DNDENEON_00830 0.0 ctpE P E1-E2 ATPase
DNDENEON_00831 3.3e-98
DNDENEON_00832 2.8e-243 trmA 2.1.1.190, 2.1.1.35 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
DNDENEON_00833 2.4e-133 S Protein of unknown function (DUF3159)
DNDENEON_00834 3.7e-151 S Protein of unknown function (DUF3710)
DNDENEON_00835 1.4e-172 exoA 3.1.11.2 L Endonuclease/Exonuclease/phosphatase family
DNDENEON_00836 0.0 dppD EP Oligopeptide/dipeptide transporter, C-terminal region
DNDENEON_00837 4.1e-170 dppC EP N-terminal TM domain of oligopeptide transport permease C
DNDENEON_00838 1.6e-155 dppB EP Binding-protein-dependent transport system inner membrane component
DNDENEON_00839 0.0 E ABC transporter, substrate-binding protein, family 5
DNDENEON_00840 0.0 E ABC transporter, substrate-binding protein, family 5
DNDENEON_00841 1.6e-171 xerC D Belongs to the 'phage' integrase family. XerC subfamily
DNDENEON_00842 5.2e-08
DNDENEON_00843 2.8e-34
DNDENEON_00844 4.1e-192 tyrA 1.3.1.12, 1.3.1.43 E Prephenate dehydrogenase
DNDENEON_00845 2.9e-179 pheA 1.3.1.12, 4.2.1.51, 5.4.99.5 E Prephenate dehydratase
DNDENEON_00846 6.2e-94
DNDENEON_00847 0.0 typA T Elongation factor G C-terminus
DNDENEON_00848 1.9e-218 iscS1 2.8.1.7 E Aminotransferase class-V
DNDENEON_00849 5.2e-151 nadC 1.4.3.16, 2.4.2.19 H Quinolinate phosphoribosyl transferase, N-terminal domain
DNDENEON_00850 3.5e-297 nadB 1.3.5.4, 1.4.3.16, 2.4.2.19 H Catalyzes the oxidation of L-aspartate to iminoaspartate
DNDENEON_00851 2e-249 nadA 2.5.1.72 H Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
DNDENEON_00852 3.4e-146 nrtR 3.6.1.55 F NUDIX hydrolase
DNDENEON_00853 2.6e-152 soj D CobQ CobB MinD ParA nucleotide binding domain protein
DNDENEON_00854 4e-173 xerD D recombinase XerD
DNDENEON_00855 9.6e-62 rplT J Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
DNDENEON_00856 2.1e-25 rpmI J Ribosomal protein L35
DNDENEON_00857 2.4e-103 infC J IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
DNDENEON_00858 7.8e-140 2.7.6.2 H Thiamin pyrophosphokinase, vitamin B1 binding domain
DNDENEON_00859 1.6e-199 gap 1.2.1.12 G Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
DNDENEON_00860 5e-90 ybaK J Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
DNDENEON_00861 6.2e-185 ispH 1.17.7.4, 2.7.4.25 IM Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
DNDENEON_00862 4.3e-188 galM 5.1.3.3 G Aldose 1-epimerase
DNDENEON_00863 1.2e-36
DNDENEON_00864 1.3e-97 sigH K Belongs to the sigma-70 factor family. ECF subfamily
DNDENEON_00865 1.3e-271 murE 6.3.2.13, 6.3.2.7 M Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
DNDENEON_00866 9.5e-186 V Acetyltransferase (GNAT) domain
DNDENEON_00867 1.9e-289 folC 6.3.2.12, 6.3.2.17 H Mur ligase middle domain
DNDENEON_00868 0.0 pepP 3.4.11.9 E Aminopeptidase P, N-terminal domain
DNDENEON_00869 9e-95 3.6.1.55 F NUDIX domain
DNDENEON_00870 0.0 P Belongs to the ABC transporter superfamily
DNDENEON_00871 4.7e-192 dppC EP Binding-protein-dependent transport system inner membrane component
DNDENEON_00872 1.7e-188 dppB EP Binding-protein-dependent transport system inner membrane component
DNDENEON_00873 6.1e-307 ddpA E Bacterial extracellular solute-binding proteins, family 5 Middle
DNDENEON_00874 6.6e-218 GK ROK family
DNDENEON_00875 2.9e-165 2.7.1.4 G pfkB family carbohydrate kinase
DNDENEON_00876 4.6e-220 S Metal-independent alpha-mannosidase (GH125)
DNDENEON_00877 1.6e-27
DNDENEON_00878 8.4e-248 yihS 5.1.3.11 G N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase)
DNDENEON_00879 1.7e-140 ftsQ 6.3.2.4 D Cell division protein FtsQ
DNDENEON_00880 4e-271 murC 6.3.2.8 M Belongs to the MurCDEF family
DNDENEON_00881 6.3e-216 murG 2.4.1.227, 6.3.2.8 GT28 M Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
DNDENEON_00882 8.1e-203 ftsW 2.4.1.227 GT28 D Belongs to the SEDS family
DNDENEON_00883 2.1e-255 murD 6.3.2.9 M Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
DNDENEON_00884 8.8e-193 mraY 2.7.8.13 M First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
DNDENEON_00885 6.4e-263 murF 6.3.2.10 M Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
DNDENEON_00886 4.2e-153 yqeC 6.3.2.10, 6.3.2.13 M Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
DNDENEON_00887 0.0 ftsI 3.4.16.4 M Penicillin-binding protein, transpeptidase domain protein
DNDENEON_00888 1.8e-62 ftsL D Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
DNDENEON_00889 1.3e-190 rsmH 2.1.1.199 J Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
DNDENEON_00890 1.2e-91 mraZ K Belongs to the MraZ family
DNDENEON_00891 0.0 L DNA helicase
DNDENEON_00892 8.7e-218 serA 1.1.1.399, 1.1.1.95 EH D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
DNDENEON_00893 8.5e-84 nrdR K Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
DNDENEON_00894 8.8e-53 M Lysin motif
DNDENEON_00895 2.2e-131 lexA 3.4.21.88 K Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
DNDENEON_00896 1.3e-149 czcD P Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
DNDENEON_00897 1.1e-175 ldh 1.1.1.27, 1.1.1.37 C Belongs to the LDH MDH superfamily. LDH family
DNDENEON_00898 2.1e-253 hflX S GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
DNDENEON_00899 1.3e-105 rsmC 2.1.1.172 J Ribosomal protein L11 methyltransferase (PrmA)
DNDENEON_00900 0.0 hrpA 3.6.4.13 L Helicase associated domain (HA2) Add an annotation
DNDENEON_00901 1.6e-175
DNDENEON_00902 6.1e-178 V N-Acetylmuramoyl-L-alanine amidase
DNDENEON_00903 3.9e-116 ytrE V ATPases associated with a variety of cellular activities
DNDENEON_00904 3.8e-120
DNDENEON_00905 3.8e-13 2.7.13.3 T Histidine kinase
DNDENEON_00906 3.5e-24 T helix_turn_helix, Lux Regulon
DNDENEON_00907 3.5e-24 T helix_turn_helix, Lux Regulon
DNDENEON_00908 2e-71 T helix_turn_helix, Lux Regulon
DNDENEON_00910 2.6e-97
DNDENEON_00911 5.4e-17
DNDENEON_00912 1.8e-42
DNDENEON_00913 5.9e-124
DNDENEON_00914 1.2e-211 EGP Major facilitator Superfamily
DNDENEON_00915 8.1e-139 M Converts alpha-N-acetylneuranimic acid (Neu5Ac) to the beta-anomer, accelerating the equilibrium between the alpha- and beta-anomers. Probably facilitates sialidase-negative bacteria to compete sucessfully for limited amounts of extracellular Neu5Ac, which is likely taken up in the beta-anomer. In addition, the rapid removal of sialic acid from solution might be advantageous to the bacterium to damp down host responses
DNDENEON_00916 2.4e-217 S Domain of unknown function (DUF5067)
DNDENEON_00917 3.1e-264 glnA2 6.3.1.2 E glutamine synthetase
DNDENEON_00918 1.4e-130 hisA 5.3.1.16, 5.3.1.24 E Histidine biosynthesis protein
DNDENEON_00919 1.4e-121 hisH E IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
DNDENEON_00920 1.5e-122
DNDENEON_00921 1.5e-109 hisB 1.1.1.23, 2.6.1.9, 3.1.3.15, 4.2.1.19 E Imidazoleglycerol-phosphate dehydratase
DNDENEON_00922 2.5e-225 hisC 2.6.1.9 E Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
DNDENEON_00923 2.4e-259 hisD 1.1.1.23, 1.1.1.308 E Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
DNDENEON_00924 0.0 dnaE 2.7.7.7 L DNA polymerase III alpha subunit
DNDENEON_00925 4.9e-176 rluD 5.4.99.23, 5.4.99.28, 5.4.99.29 J Responsible for synthesis of pseudouridine from uracil
DNDENEON_00926 4.3e-87 lspA 3.4.23.36 MU This protein specifically catalyzes the removal of signal peptides from prolipoproteins
DNDENEON_00927 1.3e-30 3.1.21.3 V DivIVA protein
DNDENEON_00928 1.2e-40 yggT S YGGT family
DNDENEON_00929 8.9e-81 sepF D Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
DNDENEON_00930 5.6e-220 ftsZ D Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
DNDENEON_00931 1.1e-244 dus J Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
DNDENEON_00932 1.3e-295 glyQS 6.1.1.14 J Catalyzes the attachment of glycine to tRNA(Gly)
DNDENEON_00933 1e-105 S Pilus assembly protein, PilO
DNDENEON_00934 1.8e-165 pilN NU PFAM Fimbrial assembly family protein
DNDENEON_00935 3e-190 pilM NU Type IV pilus assembly protein PilM;
DNDENEON_00936 2.4e-150 pilD 3.4.23.43 NOU Bacterial Peptidase A24 N-terminal domain
DNDENEON_00937 0.0
DNDENEON_00938 4.7e-230 pilC U Type II secretion system (T2SS), protein F
DNDENEON_00939 2.4e-46 pilA NU Prokaryotic N-terminal methylation motif
DNDENEON_00940 2.1e-104 S Prokaryotic N-terminal methylation motif
DNDENEON_00941 4.9e-137 ppdC NU Prokaryotic N-terminal methylation motif
DNDENEON_00942 0.0 pulE NU Type II/IV secretion system protein
DNDENEON_00943 0.0 pilT NU Type II/IV secretion system protein
DNDENEON_00944 0.0
DNDENEON_00945 1.9e-153 thiM 2.7.1.50 H Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
DNDENEON_00946 2e-132 thiE 2.5.1.3, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP)
DNDENEON_00947 2.9e-151 thiD 2.5.1.3, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Phosphomethylpyrimidine kinase
DNDENEON_00948 3e-60 S Thiamine-binding protein
DNDENEON_00949 2.4e-192 K helix_turn _helix lactose operon repressor
DNDENEON_00950 6.2e-241 lacY P LacY proton/sugar symporter
DNDENEON_00951 0.0 cscA 3.2.1.26 GH32 G Belongs to the glycosyl hydrolase 32 family
DNDENEON_00952 1.5e-137 ytlD1 2.7.1.50 P Binding-protein-dependent transport system inner membrane component
DNDENEON_00953 2.6e-205 P NMT1/THI5 like
DNDENEON_00954 5.4e-218 iunH1 3.2.2.1 F nucleoside hydrolase
DNDENEON_00955 4e-155 uppS 2.5.1.31, 2.5.1.86, 2.5.1.88 H Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
DNDENEON_00956 7.3e-135 recO L Involved in DNA repair and RecF pathway recombination
DNDENEON_00957 0.0 I acetylesterase activity
DNDENEON_00958 5.6e-225 ispG 1.17.7.1, 1.17.7.3 I Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
DNDENEON_00959 8.5e-218 dxr 1.1.1.267 I Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP)
DNDENEON_00960 3.4e-238 2.7.11.1 NU Tfp pilus assembly protein FimV
DNDENEON_00962 6.5e-75 S Protein of unknown function (DUF3052)
DNDENEON_00963 1.3e-154 lon T Belongs to the peptidase S16 family
DNDENEON_00964 1.7e-285 S Zincin-like metallopeptidase
DNDENEON_00965 1.6e-282 uvrD2 3.6.4.12 L DNA helicase
DNDENEON_00966 5.2e-268 mphA S Aminoglycoside phosphotransferase
DNDENEON_00967 3.6e-32 S Protein of unknown function (DUF3107)
DNDENEON_00968 4.5e-174 PPA1328 3.1.3.97 S DNA polymerase alpha chain like domain
DNDENEON_00969 2.1e-117 S Vitamin K epoxide reductase
DNDENEON_00970 7.8e-171 dapF 5.1.1.7 E Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine
DNDENEON_00971 2.2e-145 murI 5.1.1.3 M Provides the (R)-glutamate required for cell wall biosynthesis
DNDENEON_00972 3.5e-21 S Patatin-like phospholipase
DNDENEON_00973 8.6e-301 E ABC transporter, substrate-binding protein, family 5
DNDENEON_00974 4.9e-176 iaaA 3.4.19.5, 3.5.1.1 E Asparaginase
DNDENEON_00975 2.2e-159 S Patatin-like phospholipase
DNDENEON_00976 1.1e-184 K LysR substrate binding domain protein
DNDENEON_00977 3.7e-240 patB 4.4.1.8 E Aminotransferase, class I II
DNDENEON_00978 6.9e-124 S Phospholipase/Carboxylesterase
DNDENEON_00979 6.6e-17 S Phage derived protein Gp49-like (DUF891)
DNDENEON_00980 7.8e-48 cas2 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
DNDENEON_00981 3.3e-197 cas1 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
DNDENEON_00982 4.5e-131 cas4 3.1.12.1 L Domain of unknown function DUF83
DNDENEON_00983 4.5e-152 csd2 L CRISPR-associated protein Cas7
DNDENEON_00984 0.0 csd1 3.5.1.28 M CRISPR-associated protein (Cas_Csd1)
DNDENEON_00985 1.2e-137 cas5d S CRISPR-associated protein (Cas_Cas5)
DNDENEON_00986 0.0 cas3 L DEAD-like helicases superfamily
DNDENEON_00987 0.0 ileS 6.1.1.5 J amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
DNDENEON_00988 1e-257 lacS G Psort location CytoplasmicMembrane, score 10.00
DNDENEON_00989 9e-184 lacR K Transcriptional regulator, LacI family
DNDENEON_00990 0.0 V ABC transporter transmembrane region
DNDENEON_00991 0.0 V ABC transporter, ATP-binding protein
DNDENEON_00992 1.1e-95 K MarR family
DNDENEON_00993 0.0 bglB 3.2.1.21 GH3 G Glycosyl hydrolase family 3 N-terminal domain protein
DNDENEON_00994 2.5e-106 K Bacterial regulatory proteins, tetR family
DNDENEON_00995 2.1e-192 glxK 2.7.1.165 G Belongs to the glycerate kinase type-1 family
DNDENEON_00996 0.0 bgl2 3.2.1.21 GH3 G Fibronectin type III-like domain
DNDENEON_00997 2.3e-108 K Bacterial regulatory proteins, tetR family
DNDENEON_00998 1.1e-239 3.2.1.58 G Belongs to the glycosyl hydrolase 5 (cellulase A) family
DNDENEON_00999 0.0 3.2.1.37 GH43 G Glycosyl hydrolases family 43
DNDENEON_01000 8.9e-247 3.2.1.58 G Belongs to the glycosyl hydrolase 5 (cellulase A) family
DNDENEON_01001 4.6e-198 P Major Facilitator Superfamily
DNDENEON_01002 7e-75 mcyA Q Nodulation protein S (NodS)
DNDENEON_01003 1.9e-209 hsvB 6.3.2.4 M Belongs to the D-alanine--D-alanine ligase family
DNDENEON_01004 2e-130 ydjE EGP Major facilitator Superfamily
DNDENEON_01005 2.6e-20 Q Belongs to the P-Pant transferase superfamily
DNDENEON_01007 1.2e-271 srfJ1 3.2.1.45 GH30 G Glycosyl hydrolase family 30 TIM-barrel domain
DNDENEON_01009 4e-224 G Transporter major facilitator family protein
DNDENEON_01010 2.3e-105 K Bacterial regulatory proteins, tetR family
DNDENEON_01011 0.0 lacZ3 3.2.1.23 G Beta-galactosidase trimerisation domain
DNDENEON_01012 4.2e-115 K Bacterial regulatory proteins, tetR family
DNDENEON_01013 3.2e-255 gshA 6.3.2.2 H Glutamate-cysteine ligase family 2(GCS2)
DNDENEON_01014 0.0 hgdC I CoA enzyme activase uncharacterised domain (DUF2229)
DNDENEON_01015 3.9e-156 hgdC I BadF/BadG/BcrA/BcrD ATPase family
DNDENEON_01016 1.6e-139 nrdG 1.97.1.4 O Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
DNDENEON_01017 0.0 nrdD 1.1.98.6 F Anaerobic ribonucleoside-triphosphate reductase
DNDENEON_01018 8.9e-245 xseA 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
DNDENEON_01019 1.5e-40 xseB 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
DNDENEON_01021 2.5e-195 S Endonuclease/Exonuclease/phosphatase family
DNDENEON_01022 3.4e-29 L COG0675 Transposase and inactivated derivatives
DNDENEON_01023 3.7e-36 VY92_01845 L Transposase IS200 like
DNDENEON_01025 1.1e-98 tmp1 S Domain of unknown function (DUF4391)
DNDENEON_01026 3e-168 ppx 3.6.1.11, 3.6.1.40 FP Ppx/GppA phosphatase family
DNDENEON_01027 2.1e-232 aspB E Aminotransferase class-V
DNDENEON_01028 1.9e-70 vsr L May nick specific sequences that contain T G mispairs resulting from m5C-deamination
DNDENEON_01029 8.1e-185 afr_2 S Oxidoreductase family, NAD-binding Rossmann fold
DNDENEON_01030 0.0 helD 3.6.4.12 L Psort location Cytoplasmic, score 8.87
DNDENEON_01031 3.4e-21 nudG 3.6.1.55, 3.6.1.65 L NUDIX domain
DNDENEON_01032 3.2e-222 L Psort location Cytoplasmic, score 8.87
DNDENEON_01033 4.1e-71 L Transposase IS200 like
DNDENEON_01034 9.3e-302 KL Domain of unknown function (DUF3427)
DNDENEON_01035 3.4e-76
DNDENEON_01036 7.5e-71 S Bacterial PH domain
DNDENEON_01037 4.8e-246 S zinc finger
DNDENEON_01038 4e-112 dcd 3.5.4.13 F Belongs to the dCTP deaminase family
DNDENEON_01039 1.2e-154 ypfH S Phospholipase/Carboxylesterase
DNDENEON_01040 0.0 yjcE P Sodium/hydrogen exchanger family
DNDENEON_01041 1e-45 tadA 3.5.4.1, 3.5.4.33, 3.8.1.5, 6.3.4.19 FJ Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
DNDENEON_01042 0.0 3.2.1.22 G Glycosyl hydrolase family 36 N-terminal domain
DNDENEON_01043 1.5e-230 nagC GK ROK family
DNDENEON_01044 1.5e-244 msmE7 G Bacterial extracellular solute-binding protein
DNDENEON_01045 6.6e-157 G Binding-protein-dependent transport system inner membrane component
DNDENEON_01046 2.6e-155 G Binding-protein-dependent transport system inner membrane component
DNDENEON_01047 0.0 3.2.1.10 GH13 G Alpha amylase, catalytic domain protein
DNDENEON_01048 4.1e-234 tdcB 4.3.1.19 E Pyridoxal-phosphate dependent enzyme
DNDENEON_01049 3.1e-144 cobB2 K Sir2 family
DNDENEON_01050 1.7e-172 I alpha/beta hydrolase fold
DNDENEON_01051 6.2e-41
DNDENEON_01052 3.1e-217 serC 2.6.1.52 E Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
DNDENEON_01053 1.6e-166 usp 3.5.1.28 CBM50 S CHAP domain
DNDENEON_01054 1.3e-79 M NlpC/P60 family
DNDENEON_01055 1.3e-190 T Universal stress protein family
DNDENEON_01056 1e-72 attW O OsmC-like protein
DNDENEON_01057 3.8e-181 thyA 2.1.1.45 F Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
DNDENEON_01058 6.4e-130 folA 1.5.1.3 H dihydrofolate reductase
DNDENEON_01059 1.6e-85 ptpA 3.1.3.48 T low molecular weight
DNDENEON_01061 9e-200 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
DNDENEON_01062 9.8e-160 trmB 2.1.1.297, 2.1.1.33, 2.4.99.12, 2.4.99.13, 2.4.99.14, 2.4.99.15 GT30 J Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
DNDENEON_01066 0.0 5.1.3.2 GM ADP-glyceromanno-heptose 6-epimerase activity
DNDENEON_01067 9.7e-161
DNDENEON_01068 0.0 S Uncharacterised protein conserved in bacteria (DUF2194)
DNDENEON_01069 2.4e-283 pelF GT4 M Domain of unknown function (DUF3492)
DNDENEON_01070 1.8e-276 pelG S Putative exopolysaccharide Exporter (EPS-E)
DNDENEON_01071 6.5e-310 cotH M CotH kinase protein
DNDENEON_01072 2.2e-159 P VTC domain
DNDENEON_01073 2.2e-111 S Domain of unknown function (DUF4956)
DNDENEON_01074 0.0 yliE T Putative diguanylate phosphodiesterase
DNDENEON_01075 1.8e-204 fucO 1.1.1.1, 1.1.1.77, 1.1.99.37, 1.2.98.1 C Iron-containing alcohol dehydrogenase
DNDENEON_01076 2.1e-179 3.4.14.13 M Glycosyltransferase like family 2
DNDENEON_01077 5.3e-236 S AI-2E family transporter
DNDENEON_01078 6.3e-232 epsG M Glycosyl transferase family 21
DNDENEON_01079 1.1e-232 dacB 3.4.16.4 M D-Ala-D-Ala carboxypeptidase 3 (S13) family
DNDENEON_01080 1.5e-200 tilS 2.4.2.8, 6.3.4.19 J Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
DNDENEON_01081 3.9e-99 hpt 2.4.2.8, 6.3.4.19 F Belongs to the purine pyrimidine phosphoribosyltransferase family
DNDENEON_01082 0.0 ftsH O Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
DNDENEON_01083 9.6e-115 folE 2.7.6.3, 3.5.4.16 H GTP cyclohydrolase
DNDENEON_01084 5.8e-155 folP 1.13.11.81, 2.5.1.15, 2.7.6.3, 4.1.2.25, 5.1.99.8 H Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
DNDENEON_01085 4.1e-273 folK 1.13.11.81, 2.5.1.15, 2.7.6.3, 3.5.4.16, 3.5.4.39, 4.1.2.25, 5.1.99.8 H Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
DNDENEON_01086 3.1e-93 S Protein of unknown function (DUF3180)
DNDENEON_01087 8.5e-165 tesB I Thioesterase-like superfamily
DNDENEON_01088 0.0 yjjK S ATP-binding cassette protein, ChvD family
DNDENEON_01089 4.2e-180 V Beta-lactamase
DNDENEON_01090 9.3e-74 def2 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins
DNDENEON_01091 8.1e-146 ribD 1.1.1.193, 3.5.4.26 H Cytidine and deoxycytidylate deaminase zinc-binding region
DNDENEON_01093 4.2e-77 gmk 1.1.1.23, 2.7.4.8 S Protein conserved in bacteria
DNDENEON_01094 2.2e-295 S Amidohydrolase family
DNDENEON_01095 8.3e-251 metY 2.5.1.49 H Psort location Cytoplasmic, score 9.98
DNDENEON_01096 4.3e-266 xylA 5.3.1.5 G Belongs to the xylose isomerase family
DNDENEON_01097 0.0 3.2.1.37, 3.2.1.55 GH43,GH51 G Belongs to the glycosyl hydrolase 43 family
DNDENEON_01098 5.3e-184 K Bacterial regulatory proteins, lacI family
DNDENEON_01099 8e-230 msmE G ABC transporter periplasmic binding protein YcjN precursor K02027
DNDENEON_01100 1.3e-185 MA20_14025 U Binding-protein-dependent transport system inner membrane component
DNDENEON_01101 2.3e-159 MA20_14020 P Binding-protein-dependent transport system inner membrane component
DNDENEON_01102 0.0 xynB 3.2.1.37 GH43 G Belongs to the glycosyl hydrolase 43 family
DNDENEON_01103 0.0 3.1.1.53 G Glycosyl hydrolase family 2, sugar binding domain protein
DNDENEON_01104 9.7e-09 CE10 I Belongs to the type-B carboxylesterase lipase family
DNDENEON_01105 2.1e-106 lacA 2.3.1.79 S Bacterial transferase hexapeptide repeat protein
DNDENEON_01106 1.3e-287 xylB 1.1.1.57, 2.7.1.17 G FGGY family of carbohydrate kinases, C-terminal domain
DNDENEON_01107 1.2e-225 xylR GK ROK family
DNDENEON_01109 1.5e-35 rpmE J Binds the 23S rRNA
DNDENEON_01110 1.4e-190 prfA J Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
DNDENEON_01111 3.2e-172 prmC 2.1.1.297 J Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
DNDENEON_01112 1.7e-218 livK E Receptor family ligand binding region
DNDENEON_01113 9.5e-156 U Belongs to the binding-protein-dependent transport system permease family
DNDENEON_01114 1.5e-195 livM U Belongs to the binding-protein-dependent transport system permease family
DNDENEON_01115 4.8e-151 E Branched-chain amino acid ATP-binding cassette transporter
DNDENEON_01116 1.9e-124 livF E ATPases associated with a variety of cellular activities
DNDENEON_01117 2e-115 ywlC 2.7.7.87 J Belongs to the SUA5 family
DNDENEON_01118 4.5e-195 tagO 2.7.8.33, 2.7.8.35 M Glycosyl transferase family 4
DNDENEON_01119 2.7e-288 guaB 1.1.1.205 F Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth
DNDENEON_01120 2.2e-122 orn L 3'-to-5' exoribonuclease specific for small oligoribonucleotides
DNDENEON_01121 4.6e-160 supH S Sucrose-6F-phosphate phosphohydrolase
DNDENEON_01122 3e-270 recD2 3.6.4.12 L PIF1-like helicase
DNDENEON_01123 0.0 proS 6.1.1.15 J Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
DNDENEON_01124 6.8e-98 L Single-strand binding protein family
DNDENEON_01125 0.0 pepO 3.4.24.71 O Peptidase family M13
DNDENEON_01126 1.6e-151 map 3.4.11.18 E Methionine aminopeptidase
DNDENEON_01127 3e-248 gltA 2.3.3.1 C Citrate synthase, C-terminal domain
DNDENEON_01128 2.2e-142 dapD 2.3.1.117 E Catalyzes the conversion of the cyclic tetrahydrodipicolinate (THDP) into the acyclic N-succinyl-L-2- amino-6-oxopimelate using succinyl-CoA
DNDENEON_01129 1.2e-82 rlmH 2.1.1.177 J Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
DNDENEON_01130 1.1e-190 prfB J Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
DNDENEON_01131 2.3e-168 ftsE D Cell division ATP-binding protein FtsE
DNDENEON_01132 3.4e-161 ftsX D Part of the ABC transporter FtsEX involved in cellular division
DNDENEON_01133 2.9e-148 usp 3.5.1.28 CBM50 D CHAP domain protein
DNDENEON_01134 2e-77 smpB J the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
DNDENEON_01135 1.5e-156 pknD ET ABC transporter, substrate-binding protein, family 3
DNDENEON_01136 8.9e-32 pknD ET ABC transporter, substrate-binding protein, family 3
DNDENEON_01137 6.4e-128 pknD ET ABC transporter, substrate-binding protein, family 3
DNDENEON_01138 2.2e-126 yecS E Binding-protein-dependent transport system inner membrane component
DNDENEON_01139 8.5e-145 tcyC 3.6.3.21 E ATPases associated with a variety of cellular activities
DNDENEON_01140 0.0 glmS 2.6.1.16 M Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
DNDENEON_01141 1.1e-146 rluA 5.4.99.28, 5.4.99.29 J RNA pseudouridylate synthase
DNDENEON_01142 5.8e-228 sstT E Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system)
DNDENEON_01143 0.0 lacZ5 3.2.1.23 G Psort location Cytoplasmic, score 8.87
DNDENEON_01144 1.7e-273 G Bacterial extracellular solute-binding protein
DNDENEON_01145 4.8e-122 K Transcriptional regulatory protein, C terminal
DNDENEON_01146 8.8e-142 T His Kinase A (phosphoacceptor) domain
DNDENEON_01147 7e-82 S SnoaL-like domain
DNDENEON_01148 2e-143 coaX 2.7.1.33 H Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
DNDENEON_01149 7e-242 coaBC 4.1.1.36, 6.3.2.5 H Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
DNDENEON_01150 8.7e-293 E ABC transporter, substrate-binding protein, family 5
DNDENEON_01151 1.3e-166 P Binding-protein-dependent transport system inner membrane component
DNDENEON_01152 1.2e-139 EP Binding-protein-dependent transport system inner membrane component
DNDENEON_01153 1.4e-136 oppD EP oligopeptide transport protein of the ABC superfamily, ATP-binding component
DNDENEON_01154 6.8e-139 sapF E ATPases associated with a variety of cellular activities
DNDENEON_01155 7.6e-191 cbs 2.5.1.47, 4.2.1.22 E Pyridoxal-phosphate dependent enzyme
DNDENEON_01156 2.2e-218 metB 2.5.1.48, 4.4.1.1, 4.4.1.8 E Cys/Met metabolism PLP-dependent enzyme
DNDENEON_01157 0.0 macB_2 V ATPases associated with a variety of cellular activities
DNDENEON_01158 0.0 recQ 3.6.4.12 L ATP-dependent DNA helicase RecQ
DNDENEON_01159 3.9e-92 luxS 4.4.1.21 H Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
DNDENEON_01160 2.7e-102 cysE 2.3.1.178 J COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
DNDENEON_01161 3.1e-270 yhdG E aromatic amino acid transport protein AroP K03293
DNDENEON_01162 2e-307 alr 5.1.1.1 M Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
DNDENEON_01163 0.0 dnaG L RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
DNDENEON_01164 5.2e-215 ybiR P Citrate transporter
DNDENEON_01166 0.0 tetP J Elongation factor G, domain IV
DNDENEON_01170 2e-101 K acetyltransferase
DNDENEON_01171 1.1e-108 papP E Binding-protein-dependent transport system inner membrane component
DNDENEON_01172 1.4e-119 E Binding-protein-dependent transport system inner membrane component
DNDENEON_01173 1.5e-152 glnQ 3.6.3.21 E ATP binding protein of ABC transporter for glutamate aspartate K02028
DNDENEON_01174 6.9e-143 cjaA ET Bacterial periplasmic substrate-binding proteins
DNDENEON_01175 1.3e-198 panE1 1.1.1.169 H Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
DNDENEON_01176 1.5e-155 metQ M NLPA lipoprotein
DNDENEON_01177 6.5e-193 metN P Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
DNDENEON_01178 4.9e-98 metI P Psort location CytoplasmicMembrane, score 9.99
DNDENEON_01179 1.4e-220 mtnE 2.6.1.83 E Aminotransferase class I and II
DNDENEON_01180 4.3e-13 metC 2.5.1.48, 4.4.1.8 E Cys/Met metabolism PLP-dependent enzyme
DNDENEON_01181 2.4e-43 metC 2.5.1.48, 4.4.1.8 E Cys/Met metabolism PLP-dependent enzyme
DNDENEON_01182 1.4e-43 XAC3035 O Glutaredoxin
DNDENEON_01183 3.1e-127 XK27_08050 O prohibitin homologues
DNDENEON_01184 3.4e-14 S Domain of unknown function (DUF4143)
DNDENEON_01185 1.1e-73
DNDENEON_01186 9.6e-135 V ATPases associated with a variety of cellular activities
DNDENEON_01187 4.4e-147 M Conserved repeat domain
DNDENEON_01188 7.5e-256 macB_8 V MacB-like periplasmic core domain
DNDENEON_01189 0.0 dxs 2.2.1.7 H Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
DNDENEON_01190 1.2e-183 adh3 C Zinc-binding dehydrogenase
DNDENEON_01191 1.1e-84 purE 5.4.99.18 F Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
DNDENEON_01192 1.3e-226 purK 6.3.4.18 F Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
DNDENEON_01193 8.8e-89 zur P Belongs to the Fur family
DNDENEON_01194 0.0 XK27_08315 M Psort location CytoplasmicMembrane, score 9.26
DNDENEON_01195 2.5e-203 psuK 2.7.1.15, 2.7.1.45, 2.7.1.83 G pfkB family carbohydrate kinase
DNDENEON_01196 2.7e-188 yeiI 2.7.1.15, 2.7.1.45, 2.7.1.83 G pfkB family carbohydrate kinase
DNDENEON_01197 3.3e-129 trpF 5.3.1.24 E N-(5'phosphoribosyl)anthranilate (PRA) isomerase
DNDENEON_01198 1.1e-214 1.1.1.1 C Iron-containing alcohol dehydrogenase
DNDENEON_01199 1.1e-183 rihB 3.2.2.1 F Inosine-uridine preferring nucleoside hydrolase
DNDENEON_01200 1.6e-247 EGP Major facilitator Superfamily
DNDENEON_01201 4.8e-235 purD 6.3.4.13 F Belongs to the GARS family
DNDENEON_01202 8.3e-185 purM 6.3.3.1, 6.3.4.13 F Phosphoribosylformylglycinamidine cyclo-ligase
DNDENEON_01203 1e-284 purF 2.4.2.14 F Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
DNDENEON_01204 2.3e-311 umuC 2.7.7.7 L DNA-damage repair protein (DNA polymerase IV) K00961
DNDENEON_01205 1.9e-36
DNDENEON_01206 0.0 purL 6.3.5.3 F CobB/CobQ-like glutamine amidotransferase domain
DNDENEON_01207 4.3e-138 purC 4.1.1.21, 4.3.2.2, 6.3.2.6 F Belongs to the SAICAR synthetase family
DNDENEON_01208 1.3e-227 purT 2.1.2.2 F Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
DNDENEON_01209 1.5e-225 M Glycosyl transferase 4-like domain
DNDENEON_01210 2.9e-198 ltaE 4.1.2.48 E Beta-eliminating lyase
DNDENEON_01212 8.1e-188 yocS S SBF-like CPA transporter family (DUF4137)
DNDENEON_01213 1.2e-61 rpsL J Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
DNDENEON_01214 3.3e-80 rpsG J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
DNDENEON_01215 0.0 fusA J Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
DNDENEON_01216 9.5e-233 tuf J This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
DNDENEON_01217 2e-103 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
DNDENEON_01218 1.8e-75 nusB K Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
DNDENEON_01219 1.1e-239 carA 6.3.5.5 F Belongs to the CarA family
DNDENEON_01220 0.0 carB 6.3.5.5 EF Carbamoyl-phosphate synthetase large chain, oligomerisation domain
DNDENEON_01221 3.7e-171 pyrF 2.4.2.10, 4.1.1.23 F Essential for recycling GMP and indirectly, cGMP
DNDENEON_01222 1.2e-106 gmk 2.7.4.8, 4.1.1.23 F Essential for recycling GMP and indirectly, cGMP
DNDENEON_01224 0.0 ilvD 4.2.1.9 H Belongs to the IlvD Edd family
DNDENEON_01225 1.4e-46 rpoZ 2.7.7.6 K Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
DNDENEON_01226 4.2e-228 metK 2.5.1.6 H Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
DNDENEON_01227 0.0 priA L Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
DNDENEON_01228 7.8e-134 3.8.1.2 S Haloacid dehalogenase-like hydrolase
DNDENEON_01229 5.4e-178 fmt 2.1.1.176, 2.1.2.9 J Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
DNDENEON_01230 3.5e-123 serB 3.1.3.3 E haloacid dehalogenase-like hydrolase
DNDENEON_01231 9.9e-283 arc O AAA ATPase forming ring-shaped complexes
DNDENEON_01232 1.6e-302 dop 3.5.1.119, 6.3.1.19 S Pup-ligase protein
DNDENEON_01233 3.3e-160 hisN 3.1.3.25 G Inositol monophosphatase family
DNDENEON_01234 1.4e-24 pup S Protein modifier that is covalently attached to lysine residues of substrate proteins, thereby targeting them for proteasomal degradation. The tagging system is termed pupylation
DNDENEON_01235 2.6e-280 pafA 6.3.1.19 O Catalyzes the covalent attachment of the prokaryotic ubiquitin-like protein modifier Pup to the proteasomal substrate proteins, thereby targeting them for proteasomal degradation. This tagging system is termed pupylation. The ligation reaction involves the side-chain carboxylate of the C-terminal glutamate of Pup and the side-chain amino group of a substrate lysine
DNDENEON_01236 9.7e-141 C FMN binding
DNDENEON_01237 1.8e-57
DNDENEON_01238 1.4e-41 hup L Belongs to the bacterial histone-like protein family
DNDENEON_01239 0.0 S Lysylphosphatidylglycerol synthase TM region
DNDENEON_01240 1.6e-279 purB 4.3.2.2 F Adenylosuccinate lyase C-terminal
DNDENEON_01241 1.6e-277 S PGAP1-like protein
DNDENEON_01242 5.6e-53
DNDENEON_01243 1.1e-61
DNDENEON_01244 1.9e-181 S von Willebrand factor (vWF) type A domain
DNDENEON_01245 4.7e-191 S von Willebrand factor (vWF) type A domain
DNDENEON_01246 5.2e-90
DNDENEON_01247 4.2e-175 S Protein of unknown function DUF58
DNDENEON_01248 4e-182 moxR S ATPase family associated with various cellular activities (AAA)
DNDENEON_01249 4.4e-137 ung 3.2.2.27 L Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
DNDENEON_01250 8.5e-77 S LytR cell envelope-related transcriptional attenuator
DNDENEON_01251 7.2e-96 L PFAM Integrase catalytic
DNDENEON_01253 3.2e-127 E Psort location Cytoplasmic, score 8.87
DNDENEON_01254 2.2e-134 yebE S DUF218 domain
DNDENEON_01255 1.2e-231 tig D Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
DNDENEON_01256 2e-236 rnd 3.1.13.5 J 3'-5' exonuclease
DNDENEON_01257 2.2e-79 S Protein of unknown function (DUF3000)
DNDENEON_01258 7.4e-166 pflA 1.97.1.4 C Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
DNDENEON_01259 0.0 pflB 2.3.1.54 C Pyruvate formate lyase-like
DNDENEON_01260 4.5e-31
DNDENEON_01261 0.0 nadE 6.3.1.5, 6.3.5.1 H Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
DNDENEON_01262 1.2e-211 S Peptidase dimerisation domain
DNDENEON_01263 1.3e-93 metI P Binding-protein-dependent transport system inner membrane component
DNDENEON_01264 2.5e-174 metN P Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
DNDENEON_01265 1.3e-150 metQ P NLPA lipoprotein
DNDENEON_01267 1.4e-110 S Sucrose-6F-phosphate phosphohydrolase
DNDENEON_01268 0.0 S LPXTG-motif cell wall anchor domain protein
DNDENEON_01269 5.5e-127 S non supervised orthologous group
DNDENEON_01273 5e-273 frc 2.8.3.16 C Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate
DNDENEON_01274 5.7e-192 yfdV S Membrane transport protein
DNDENEON_01275 0.0 oxc 4.1.1.8 EH Thiamine pyrophosphate enzyme, central domain
DNDENEON_01276 7.1e-175 M LPXTG-motif cell wall anchor domain protein
DNDENEON_01277 0.0 glgE 2.4.99.16 GH13 G Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1- 4)- glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB
DNDENEON_01278 9.7e-91 ppa 3.6.1.1 C Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
DNDENEON_01279 9.4e-98 mntP P Probably functions as a manganese efflux pump
DNDENEON_01280 4.9e-134
DNDENEON_01281 4.9e-134 KT Transcriptional regulatory protein, C terminal
DNDENEON_01282 9.4e-123 nth 4.2.99.18 L DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
DNDENEON_01283 3.5e-288 E Bacterial extracellular solute-binding proteins, family 5 Middle
DNDENEON_01284 0.0 valS 6.1.1.9 J amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
DNDENEON_01285 0.0 S domain protein
DNDENEON_01286 1e-69 tyrA 5.4.99.5 E Chorismate mutase type II
DNDENEON_01287 1.3e-79 K helix_turn_helix ASNC type
DNDENEON_01288 1.9e-247 rho K Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
DNDENEON_01289 0.0 5.4.99.9 H Flavin containing amine oxidoreductase
DNDENEON_01290 2.1e-51 S Protein of unknown function (DUF2469)
DNDENEON_01291 2.7e-205 2.3.1.57 J Acetyltransferase (GNAT) domain
DNDENEON_01292 8.7e-284 gatB 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
DNDENEON_01293 8.6e-287 gatA 6.3.5.6, 6.3.5.7 F Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
DNDENEON_01294 1.3e-46 gatC 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
DNDENEON_01295 6.2e-134 K Psort location Cytoplasmic, score
DNDENEON_01296 3.8e-144 spoU 2.1.1.185 J RNA methyltransferase TrmH family
DNDENEON_01297 8.4e-114 pyrE 2.4.2.10 F Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
DNDENEON_01298 0.0 scrB 3.2.1.26, 3.2.1.97 GH101,GH32 N Glycosyl hydrolases family 43
DNDENEON_01299 0.0 N Bacterial Ig-like domain 2
DNDENEON_01300 4.4e-170 rmuC S RmuC family
DNDENEON_01301 1.4e-132 3.6.3.3, 3.6.3.5, 3.6.3.54 P Heavy metal translocating P-type atpase
DNDENEON_01302 0.0 clpB O Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
DNDENEON_01303 1.4e-164 fahA Q Fumarylacetoacetate (FAA) hydrolase family
DNDENEON_01304 1.4e-147 yggS S Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
DNDENEON_01305 1.2e-79
DNDENEON_01306 2.4e-209 gluQ 6.1.1.17 J Belongs to the class-I aminoacyl-tRNA synthetase family
DNDENEON_01307 3.2e-70 M Protein of unknown function (DUF3152)
DNDENEON_01308 4.2e-09 M Protein of unknown function (DUF3152)
DNDENEON_01309 1.4e-125 gla U Belongs to the MIP aquaporin (TC 1.A.8) family
DNDENEON_01311 1.7e-70 rplI J Binds to the 23S rRNA
DNDENEON_01312 3.5e-36 rpsR J Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
DNDENEON_01313 2.8e-69 ssb1 L Single-stranded DNA-binding protein
DNDENEON_01314 1.6e-185 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
DNDENEON_01315 2.8e-174 rbsK 2.7.1.15 H Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
DNDENEON_01316 1.1e-259 EGP Major Facilitator Superfamily
DNDENEON_01317 3.3e-167 iunH2 3.2.2.1 F Inosine-uridine preferring nucleoside hydrolase
DNDENEON_01318 1.1e-197 K helix_turn _helix lactose operon repressor
DNDENEON_01319 4.5e-61
DNDENEON_01320 4.8e-204 rfbB 4.2.1.46 M Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
DNDENEON_01321 1.6e-255 S Domain of unknown function (DUF4143)
DNDENEON_01322 2.7e-309 XK27_08315 M Psort location CytoplasmicMembrane, score 9.26
DNDENEON_01323 3.2e-196 1.1.1.22 M UDP binding domain
DNDENEON_01324 3.5e-148 M Belongs to the glycosyl hydrolase 43 family
DNDENEON_01325 6.4e-219 rgpD 3.6.3.38 GM ABC transporter, ATP-binding protein
DNDENEON_01326 1.9e-126 rgpC U Transport permease protein
DNDENEON_01327 0.0 wbbM M Glycosyl transferase family 8
DNDENEON_01328 6.6e-171 L Protein of unknown function (DUF1524)
DNDENEON_01329 2e-68 M Putative cell wall binding repeat 2
DNDENEON_01330 1.5e-137 ppm1 GT2 M Glycosyl transferase, family 2
DNDENEON_01331 0.0 wbbM M Glycosyl transferase family 8
DNDENEON_01332 5.8e-252
DNDENEON_01333 3.5e-168 S Acyltransferase family
DNDENEON_01334 7e-19 E Carbohydrate esterase, sialic acid-specific acetylesterase
DNDENEON_01335 5.9e-156 rfbJ M Glycosyl transferase family 2
DNDENEON_01336 2.9e-303 lytC 2.1.1.197, 3.2.1.17, 3.2.1.96 M Glycosyl hydrolases family 25
DNDENEON_01337 9.9e-258 S AAA domain
DNDENEON_01338 2.3e-61
DNDENEON_01339 1.1e-298 3.1.1.53 E Carbohydrate esterase, sialic acid-specific acetylesterase
DNDENEON_01340 5.6e-59
DNDENEON_01342 2.5e-153 EGP Major facilitator Superfamily
DNDENEON_01343 0.0 pulA 3.2.1.1, 3.2.1.41 CBM48,GH13 M Aamy_C
DNDENEON_01344 0.0 pyrG 6.3.4.2 F Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
DNDENEON_01345 0.0 S L,D-transpeptidase catalytic domain
DNDENEON_01346 9.6e-291 sufB O FeS assembly protein SufB
DNDENEON_01347 1e-234 sufD O FeS assembly protein SufD
DNDENEON_01348 1e-142 sufC O FeS assembly ATPase SufC
DNDENEON_01349 1e-240 sufS 2.8.1.7, 4.4.1.16 E Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
DNDENEON_01350 2.6e-97 iscU C SUF system FeS assembly protein, NifU family
DNDENEON_01351 2.7e-108 yitW S Iron-sulfur cluster assembly protein
DNDENEON_01352 8.1e-243 glgC 2.7.7.27 H Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
DNDENEON_01353 3e-162 spoU 2.1.1.185 J SpoU rRNA Methylase family
DNDENEON_01355 5.9e-138 rsmE 2.1.1.193 J Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit
DNDENEON_01356 1.8e-56 hinT 2.1.1.226, 2.1.1.227 FG Scavenger mRNA decapping enzyme C-term binding
DNDENEON_01357 5.9e-208 phoH T PhoH-like protein
DNDENEON_01358 9.4e-103 ybeY 2.6.99.2, 3.5.4.5 S Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
DNDENEON_01359 4.1e-251 corC S CBS domain
DNDENEON_01360 2e-180 era S An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
DNDENEON_01361 0.0 fadD 6.2.1.3 I AMP-binding enzyme
DNDENEON_01362 1.7e-202 pntA 1.6.1.2 C NAD(P) transhydrogenase subunit alpha part 1 K00324
DNDENEON_01363 1.6e-43 pntAA 1.6.1.2 C 4TM region of pyridine nucleotide transhydrogenase, mitoch
DNDENEON_01364 1e-257 pntB 1.6.1.2 C The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
DNDENEON_01365 1.9e-269 S Psort location Cytoplasmic, score 8.87
DNDENEON_01367 6.6e-224 G Transmembrane secretion effector
DNDENEON_01368 7e-121 K Bacterial regulatory proteins, tetR family
DNDENEON_01369 1.1e-39 nrdH O Glutaredoxin
DNDENEON_01370 3.3e-74 nrdI F Probably involved in ribonucleotide reductase function
DNDENEON_01371 0.0 nrdE 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
DNDENEON_01373 3.1e-189 nrdF 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
DNDENEON_01374 0.0 uvrA3 L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
DNDENEON_01375 1.5e-34 EGP Major facilitator Superfamily
DNDENEON_01376 1.1e-194 S alpha beta
DNDENEON_01377 1e-89 ctc J This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
DNDENEON_01378 1.3e-10 L Phage integrase family
DNDENEON_01379 1.2e-157 mltE2 M Bacteriophage peptidoglycan hydrolase
DNDENEON_01382 4.6e-102
DNDENEON_01383 3.2e-206
DNDENEON_01388 4.9e-24
DNDENEON_01389 2.4e-164
DNDENEON_01390 9e-13
DNDENEON_01392 6.4e-76 S Pfam:CtkA_N
DNDENEON_01394 3.9e-61
DNDENEON_01395 0.0 XK27_00515 D Cell surface antigen C-terminus
DNDENEON_01396 2.7e-97 M domain protein
DNDENEON_01397 1.3e-76 S Psort location Cytoplasmic, score 8.87
DNDENEON_01398 9.8e-173 3.4.22.70 M Sortase family
DNDENEON_01399 0.0 inlJ M domain protein
DNDENEON_01400 7.6e-259 M LPXTG cell wall anchor motif
DNDENEON_01401 2.5e-89 S Psort location Cytoplasmic, score 8.87
DNDENEON_01402 9.9e-275 cycA E Amino acid permease
DNDENEON_01403 1.2e-166 thiG 2.8.1.10 H Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S
DNDENEON_01404 8.4e-128 thiF 2.7.7.73, 2.7.7.80 H ThiF family
DNDENEON_01405 3.8e-26 thiS 2.8.1.10 H ThiS family
DNDENEON_01406 5.3e-179 1.1.1.65 C Aldo/keto reductase family
DNDENEON_01407 1.9e-57 ydgJ K helix_turn_helix multiple antibiotic resistance protein
DNDENEON_01408 3.5e-285 lmrA1 V ABC transporter, ATP-binding protein
DNDENEON_01409 0.0 lmrA2 V ABC transporter transmembrane region
DNDENEON_01410 9e-117 apbE 2.7.1.180 H Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
DNDENEON_01411 4.4e-237 G MFS/sugar transport protein
DNDENEON_01412 3.7e-294 efeU_1 P Iron permease FTR1 family
DNDENEON_01413 1.4e-92 tpd P Fe2+ transport protein
DNDENEON_01414 3.6e-230 S Predicted membrane protein (DUF2318)
DNDENEON_01415 1.5e-218 macB_2 V ABC transporter permease
DNDENEON_01417 1.6e-201 Z012_06715 V FtsX-like permease family
DNDENEON_01418 9e-150 macB V ABC transporter, ATP-binding protein
DNDENEON_01419 1.1e-61 S FMN_bind
DNDENEON_01420 1.2e-88 K Psort location Cytoplasmic, score 8.87
DNDENEON_01421 1.1e-271 pip S YhgE Pip domain protein
DNDENEON_01422 0.0 pip S YhgE Pip domain protein
DNDENEON_01423 2.9e-224 S Putative ABC-transporter type IV
DNDENEON_01424 6e-38 nrdH O Glutaredoxin
DNDENEON_01425 6.1e-58 M cell wall binding repeat
DNDENEON_01426 0.0 pknL 2.7.11.1 KLT PASTA
DNDENEON_01427 2e-197 crtE 2.5.1.1, 2.5.1.10, 2.5.1.29 H Belongs to the FPP GGPP synthase family
DNDENEON_01428 2.5e-118
DNDENEON_01429 3.4e-173 sigA K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
DNDENEON_01430 0.0 gyrB2 5.99.1.3 L DNA topoisomerase (ATP-hydrolyzing)
DNDENEON_01431 1.5e-222 G Major Facilitator Superfamily
DNDENEON_01432 8.1e-241 T PhoQ Sensor
DNDENEON_01433 2.4e-79 S Protein of unknown function (DUF2975)
DNDENEON_01434 5.8e-32 yozG K Cro/C1-type HTH DNA-binding domain
DNDENEON_01435 0.0 lhr L DEAD DEAH box helicase
DNDENEON_01436 0.0 gyrA 5.99.1.3 L DNA topoisomerase (ATP-hydrolyzing)
DNDENEON_01437 5.2e-234 S Type I phosphodiesterase / nucleotide pyrophosphatase
DNDENEON_01438 7e-147 S Protein of unknown function (DUF3071)
DNDENEON_01439 1e-47 S Domain of unknown function (DUF4193)
DNDENEON_01440 2.5e-83 dut 3.6.1.23, 4.1.1.36, 6.3.2.5 F This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA
DNDENEON_01441 0.0 relA 2.7.6.5, 3.1.7.2 KT In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
DNDENEON_01442 1.4e-140 ppiA 5.2.1.8 G PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
DNDENEON_01443 5.1e-07
DNDENEON_01444 5.2e-65
DNDENEON_01445 4.7e-118
DNDENEON_01446 1.3e-27
DNDENEON_01447 8e-15
DNDENEON_01448 2.1e-184 S Helix-turn-helix domain
DNDENEON_01449 4.3e-42
DNDENEON_01450 4.1e-89 S Transcription factor WhiB
DNDENEON_01451 1e-103 parA D AAA domain
DNDENEON_01452 6.4e-27
DNDENEON_01453 9.2e-58
DNDENEON_01454 0.0 D Cell surface antigen C-terminus
DNDENEON_01456 5.2e-26
DNDENEON_01457 5.3e-145
DNDENEON_01458 2.3e-62 S PrgI family protein
DNDENEON_01459 0.0 trsE U type IV secretory pathway VirB4
DNDENEON_01460 1.3e-259 isp2 3.2.1.96 M CHAP domain
DNDENEON_01461 2e-97
DNDENEON_01462 7.8e-130
DNDENEON_01463 8.6e-100 K DNA binding
DNDENEON_01464 4.8e-102 dam2 2.1.1.72 L D12 class N6 adenine-specific DNA methyltransferase
DNDENEON_01466 0.0 U Type IV secretory system Conjugative DNA transfer
DNDENEON_01467 9e-34
DNDENEON_01468 5.6e-36
DNDENEON_01469 0.0 XK27_00500 KL Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
DNDENEON_01470 1.3e-287
DNDENEON_01471 3.1e-163 S Protein of unknown function (DUF3801)
DNDENEON_01472 2e-249 ltrBE1 U Relaxase/Mobilisation nuclease domain
DNDENEON_01473 7.6e-43 S Bacterial mobilisation protein (MobC)
DNDENEON_01474 2.5e-42 K Protein of unknown function (DUF2442)
DNDENEON_01475 2.1e-44 S Domain of unknown function (DUF4160)
DNDENEON_01477 5.3e-31
DNDENEON_01478 6e-52
DNDENEON_01479 0.0 topB 5.99.1.2 L DNA topoisomerase
DNDENEON_01482 2e-72
DNDENEON_01483 4.5e-65
DNDENEON_01484 8.7e-67
DNDENEON_01485 9.6e-175 S Fic/DOC family
DNDENEON_01486 1.3e-08 3.1.21.4 V restriction endonuclease
DNDENEON_01487 5.2e-224 S HipA-like C-terminal domain
DNDENEON_01488 6.7e-109 L Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
DNDENEON_01489 1.3e-40 3.1.21.4 L Restriction endonuclease XhoI
DNDENEON_01491 1.4e-74 S EcsC protein family
DNDENEON_01493 2.9e-232 L Phage integrase family
DNDENEON_01494 5.7e-237 dinF V MatE
DNDENEON_01495 9.1e-182 3.4.22.70 M Sortase family
DNDENEON_01496 3.3e-227 P Sodium/hydrogen exchanger family
DNDENEON_01497 0.0 V FtsX-like permease family
DNDENEON_01498 4.1e-270 aroP E aromatic amino acid transport protein AroP K03293
DNDENEON_01499 8.3e-12 S Protein of unknown function, DUF624
DNDENEON_01500 2.5e-189 K helix_turn _helix lactose operon repressor
DNDENEON_01501 9.8e-40 G beta-mannosidase
DNDENEON_01502 0.0 3.1.1.53 E Carbohydrate esterase, sialic acid-specific acetylesterase
DNDENEON_01503 4e-203 ilvC 1.1.1.86 H Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
DNDENEON_01504 5.3e-203 ilvC 1.1.1.86 H Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
DNDENEON_01505 3.5e-252 yhjE EGP Sugar (and other) transporter
DNDENEON_01506 9.7e-270 scrT G Transporter major facilitator family protein
DNDENEON_01507 4.9e-10 S Protein of unknown function, DUF624
DNDENEON_01508 3.1e-297 gtfA 2.4.1.329, 2.4.1.7 GH13 G Domain of unknown function (DUF1964)
DNDENEON_01509 1.1e-195 K helix_turn _helix lactose operon repressor
DNDENEON_01510 5.9e-28 E Receptor family ligand binding region
DNDENEON_01511 1.1e-23 crcB U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
DNDENEON_01512 0.0 3.2.1.21 GH3 G Fibronectin type III-like domain
DNDENEON_01513 0.0 KLT Protein tyrosine kinase
DNDENEON_01514 7.5e-151 O Thioredoxin
DNDENEON_01516 1.6e-197 S G5
DNDENEON_01517 7.8e-166 ksgA 2.1.1.182, 2.1.1.184 J Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
DNDENEON_01518 1.1e-167 ispE 2.1.1.182, 2.7.1.148 F Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
DNDENEON_01519 2.6e-109 S LytR cell envelope-related transcriptional attenuator
DNDENEON_01520 3.8e-284 cca 2.7.7.19, 2.7.7.72 J Probable RNA and SrmB- binding site of polymerase A
DNDENEON_01521 6.3e-122 deoC 3.6.1.13, 3.6.1.17, 3.6.1.55, 3.6.1.61 L Belongs to the Nudix hydrolase family
DNDENEON_01522 0.0 M Conserved repeat domain
DNDENEON_01523 2.1e-305 murJ KLT MviN-like protein
DNDENEON_01524 0.0 murJ KLT MviN-like protein
DNDENEON_01525 1e-13 S Domain of unknown function (DUF4143)
DNDENEON_01526 1.4e-121 yorS 3.1.3.5 S 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C)
DNDENEON_01528 7e-14 S Psort location Extracellular, score 8.82
DNDENEON_01529 3.1e-181 trxB 1.8.1.9, 4.3.1.9 C Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
DNDENEON_01530 4.4e-202 parB K Belongs to the ParB family
DNDENEON_01531 4.5e-172 parA D CobQ CobB MinD ParA nucleotide binding domain protein
DNDENEON_01532 2.3e-129 rsmG 2.1.1.170 J Specifically methylates the N7 position of a guanine in 16S rRNA
DNDENEON_01533 8e-91 jag S Putative single-stranded nucleic acids-binding domain
DNDENEON_01534 3.9e-190 yidC U Membrane protein insertase, YidC Oxa1 family
DNDENEON_01535 5.9e-14 rpmH J Belongs to the bacterial ribosomal protein bL34 family
DNDENEON_01536 2.9e-306 dnaA L it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
DNDENEON_01537 1e-204 dnaN 2.7.7.7 L Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
DNDENEON_01538 1.3e-235 recF L it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
DNDENEON_01539 6.2e-90 S Protein of unknown function (DUF721)
DNDENEON_01540 0.0 gyrB 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
DNDENEON_01541 0.0 gyrA 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
DNDENEON_01542 3.3e-68 S Transmembrane domain of unknown function (DUF3566)
DNDENEON_01543 1.2e-260 gdhA 1.4.1.4 E Belongs to the Glu Leu Phe Val dehydrogenases family
DNDENEON_01544 6.5e-58 mscL M Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
DNDENEON_01548 3.1e-101 S Protein of unknown function DUF45
DNDENEON_01549 9e-189 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily
DNDENEON_01550 5.6e-242 ytfL P Transporter associated domain
DNDENEON_01551 5.3e-119 cah 4.2.1.1 P Reversible hydration of carbon dioxide
DNDENEON_01552 1.1e-38
DNDENEON_01553 0.0 ppc 4.1.1.31 H Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
DNDENEON_01554 0.0 yjjP S Threonine/Serine exporter, ThrE
DNDENEON_01555 9.4e-300 putP E Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
DNDENEON_01556 5.9e-205 trpS 6.1.1.2 J Belongs to the class-I aminoacyl-tRNA synthetase family
DNDENEON_01557 3.2e-41 S Protein of unknown function (DUF3073)
DNDENEON_01558 1.7e-63 I Sterol carrier protein
DNDENEON_01559 0.0 glgP 2.4.1.1 GT35 G Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties
DNDENEON_01560 1.5e-35
DNDENEON_01561 5.3e-147 gluP 3.4.21.105 S Rhomboid family
DNDENEON_01562 2.1e-239 L ribosomal rna small subunit methyltransferase
DNDENEON_01563 3.1e-57 crgA D Involved in cell division
DNDENEON_01564 6.8e-142 S Bacterial protein of unknown function (DUF881)
DNDENEON_01565 1.9e-208 srtA 3.4.22.70 M Sortase family
DNDENEON_01566 3.8e-119 trpG 2.6.1.85 EH para-aminobenzoate synthase glutamine amidotransferase component II
DNDENEON_01567 0.0 pknB 2.7.11.1 KLT Protein tyrosine kinase
DNDENEON_01568 5.8e-177 T Protein tyrosine kinase
DNDENEON_01569 5.2e-265 pbpA M penicillin-binding protein
DNDENEON_01570 8.1e-261 rodA D Belongs to the SEDS family
DNDENEON_01571 8.8e-242 pstP 3.1.3.16 T Sigma factor PP2C-like phosphatases
DNDENEON_01572 5.2e-71 fhaB T Inner membrane component of T3SS, cytoplasmic domain
DNDENEON_01573 1.2e-131 fhaA T Protein of unknown function (DUF2662)
DNDENEON_01574 0.0 dpp4 3.4.14.5 E Dipeptidyl peptidase IV (DPP IV) N-terminal region
DNDENEON_01575 2.3e-224 2.7.13.3 T Histidine kinase
DNDENEON_01576 9.3e-113 K helix_turn_helix, Lux Regulon
DNDENEON_01577 1.6e-194 pldB 3.1.1.5 I Serine aminopeptidase, S33
DNDENEON_01578 8.8e-160 yicL EG EamA-like transporter family
DNDENEON_01583 2.4e-22 2.7.13.3 T Histidine kinase
DNDENEON_01584 1.2e-36 K helix_turn_helix, Lux Regulon
DNDENEON_01585 9.4e-269 tgt 2.4.2.29 F Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine)
DNDENEON_01586 1.5e-283 degP O Domain present in PSD-95, Dlg, and ZO-1/2.
DNDENEON_01587 0.0 cadA P E1-E2 ATPase
DNDENEON_01588 7.9e-188 ansA 3.5.1.1 EJ Asparaginase
DNDENEON_01589 3.1e-270 fprA 1.18.1.2, 1.19.1.1 C Pyridine nucleotide-disulphide oxidoreductase
DNDENEON_01590 9.4e-163 htpX O Belongs to the peptidase M48B family
DNDENEON_01592 3e-184 K Helix-turn-helix XRE-family like proteins
DNDENEON_01593 3.1e-170 yddG EG EamA-like transporter family
DNDENEON_01594 0.0 pip S YhgE Pip domain protein
DNDENEON_01595 0.0 pip S YhgE Pip domain protein
DNDENEON_01596 1.6e-205 fbaA 4.1.2.13 G Fructose-bisphosphate aldolase class-II
DNDENEON_01597 1.6e-249 purA 6.3.4.4 F Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
DNDENEON_01598 1.4e-295 clcA P Voltage gated chloride channel
DNDENEON_01599 1.6e-150 U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
DNDENEON_01601 3.9e-246 nhaA P Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
DNDENEON_01602 4.8e-117 safC S O-methyltransferase
DNDENEON_01603 1.5e-177 sdhB 1.3.5.1, 1.3.5.4 C 4Fe-4S dicluster domain
DNDENEON_01604 0.0 sdhA 1.3.5.1, 1.3.5.4 C Succinate dehydrogenase flavoprotein subunit
DNDENEON_01605 2.7e-255 dprA 5.99.1.2 LU DNA recombination-mediator protein A
DNDENEON_01606 1e-292 comM O Magnesium chelatase, subunit ChlI C-terminal
DNDENEON_01607 1.5e-82 yraN L Belongs to the UPF0102 family
DNDENEON_01608 1.5e-166 pdxK 2.7.1.35 H Phosphomethylpyrimidine kinase
DNDENEON_01609 5.9e-252 metY 2.5.1.49 E Aminotransferase class-V
DNDENEON_01610 4.3e-95 XK27_01265 S ECF-type riboflavin transporter, S component
DNDENEON_01611 1.1e-305 3.6.3.24 P AAA domain, putative AbiEii toxin, Type IV TA system
DNDENEON_01612 4.5e-149 P Cobalt transport protein
DNDENEON_01613 2.4e-192 K helix_turn_helix ASNC type
DNDENEON_01614 2.8e-140 V ABC transporter, ATP-binding protein
DNDENEON_01615 0.0 MV MacB-like periplasmic core domain
DNDENEON_01616 6.8e-128 K helix_turn_helix, Lux Regulon
DNDENEON_01617 0.0 tcsS2 T Histidine kinase
DNDENEON_01618 4.7e-265 pip 3.4.11.5 S alpha/beta hydrolase fold
DNDENEON_01619 8.6e-129 proC 1.5.1.2 E Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
DNDENEON_01620 4.6e-103 ychF J ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
DNDENEON_01626 6.8e-24
DNDENEON_01627 8.4e-17
DNDENEON_01629 1.5e-15 S Helix-turn-helix domain
DNDENEON_01630 1.8e-98 L HNH endonuclease
DNDENEON_01631 1.3e-38
DNDENEON_01632 3.8e-220 S Terminase
DNDENEON_01633 4e-161 S Phage portal protein
DNDENEON_01634 1.2e-187 S Caudovirus prohead serine protease
DNDENEON_01636 4.7e-41
DNDENEON_01637 3.9e-36
DNDENEON_01638 1.3e-59
DNDENEON_01639 1.9e-54
DNDENEON_01640 4.5e-37
DNDENEON_01641 9.5e-147 NT phage tail tape measure protein
DNDENEON_01642 2.8e-109
DNDENEON_01643 1.1e-11
DNDENEON_01644 2.3e-10
DNDENEON_01645 7.1e-75 3.2.1.20, 3.5.1.28 GH31 V N-acetylmuramoyl-L-alanine amidase
DNDENEON_01646 1.9e-11 xhlB S SPP1 phage holin
DNDENEON_01647 6.2e-90 L Phage integrase family
DNDENEON_01648 0.0 S LPXTG-motif cell wall anchor domain protein
DNDENEON_01649 0.0 S LPXTG-motif cell wall anchor domain protein
DNDENEON_01650 9e-287 M LPXTG-motif cell wall anchor domain protein
DNDENEON_01651 5.4e-149 3.4.22.70 M Sortase family
DNDENEON_01652 7.6e-138
DNDENEON_01653 8.8e-48 S Psort location Cytoplasmic, score
DNDENEON_01654 1.8e-216 clcA_2 P Voltage gated chloride channel
DNDENEON_01655 1e-55
DNDENEON_01656 5.5e-235 T GHKL domain
DNDENEON_01657 2.8e-131 K LytTr DNA-binding domain
DNDENEON_01658 1.6e-210 ugpC E Belongs to the ABC transporter superfamily
DNDENEON_01659 2e-269 KLT Domain of unknown function (DUF4032)
DNDENEON_01660 1.2e-175 rlmB 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
DNDENEON_01661 1.7e-232 EGP Major facilitator Superfamily
DNDENEON_01662 4.5e-13 S Psort location Extracellular, score 8.82
DNDENEON_01663 3.4e-55 DJ Addiction module toxin, RelE StbE family
DNDENEON_01664 1.3e-48 S Antitoxin component of a toxin-antitoxin (TA) module
DNDENEON_01665 2.2e-125 S Short repeat of unknown function (DUF308)
DNDENEON_01666 0.0 lacL 3.2.1.23 G Psort location Cytoplasmic, score 8.87
DNDENEON_01667 0.0 lacL 3.2.1.23 G Psort location Cytoplasmic, score 8.87
DNDENEON_01668 4.1e-135 tenA 3.5.99.2 K Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway. Thus, catalyzes the conversion of 4-amino-5-aminomethyl-2-methylpyrimidine to 4-amino- 5-hydroxymethyl-2-methylpyrimidine (HMP)
DNDENEON_01670 0.0 cbgA_1 3.2.1.23 G Belongs to the glycosyl hydrolase 2 family
DNDENEON_01671 0.0 metG 6.1.1.10 J Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
DNDENEON_01672 6.6e-107
DNDENEON_01673 6.1e-191 rsmI 2.1.1.198 H Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
DNDENEON_01674 1.6e-17 3.2.1.78 GH26 G Glycosyl hydrolase family 26
DNDENEON_01675 5.8e-126 dedA S SNARE associated Golgi protein
DNDENEON_01677 8.7e-130 S HAD hydrolase, family IA, variant 3
DNDENEON_01678 8.6e-47
DNDENEON_01679 4.5e-115 hspR K transcriptional regulator, MerR family
DNDENEON_01680 3.9e-158 dnaJ1 O DnaJ molecular chaperone homology domain
DNDENEON_01681 2.8e-48 grpE O Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
DNDENEON_01682 0.0 dnaK O Heat shock 70 kDa protein
DNDENEON_01683 1.2e-143 S Mitochondrial biogenesis AIM24
DNDENEON_01684 0.0 phoA 3.1.3.1, 3.1.3.39 P Alkaline phosphatase homologues
DNDENEON_01685 4.4e-129 S membrane transporter protein
DNDENEON_01686 7.7e-157 srtC 3.4.22.70 M Sortase family
DNDENEON_01687 3.9e-185 M Cna protein B-type domain
DNDENEON_01688 4.1e-257 M LPXTG-motif cell wall anchor domain protein
DNDENEON_01689 0.0 M cell wall anchor domain protein
DNDENEON_01690 4.8e-193 K Psort location Cytoplasmic, score
DNDENEON_01691 7e-139 traX S TraX protein
DNDENEON_01692 5.4e-144 S HAD-hyrolase-like
DNDENEON_01693 0.0 pulA 3.2.1.41 CBM48,GH13 G Belongs to the glycosyl hydrolase 13 family
DNDENEON_01694 1.9e-164 malG G Binding-protein-dependent transport system inner membrane component
DNDENEON_01695 4.5e-250 malF G Binding-protein-dependent transport system inner membrane component
DNDENEON_01696 1.6e-222 malE G Bacterial extracellular solute-binding protein
DNDENEON_01697 0.0 malL 3.2.1.1, 5.4.99.16 GH13 G Alpha-amylase domain
DNDENEON_01698 0.0 malQ 2.4.1.18, 2.4.1.25, 3.2.1.196, 5.4.99.15 CBM48,GH13,GH77 G 4-alpha-glucanotransferase
DNDENEON_01699 2.9e-13 S Transposon-encoded protein TnpV
DNDENEON_01700 9.7e-109 pepE 3.4.13.21 E Peptidase family S51
DNDENEON_01701 3.4e-106 S Protein of unknown function, DUF624
DNDENEON_01702 1.7e-151 rafG G ABC transporter permease
DNDENEON_01703 3.7e-154 msmF G Binding-protein-dependent transport system inner membrane component
DNDENEON_01704 1.7e-182 K Psort location Cytoplasmic, score
DNDENEON_01705 4.1e-187 K Periplasmic binding protein-like domain
DNDENEON_01706 7.5e-266 amyE G Bacterial extracellular solute-binding protein
DNDENEON_01707 0.0 3.2.1.10, 3.2.1.20, 3.2.1.93 GH13,GH31 G Alpha-amylase domain
DNDENEON_01708 1.1e-258 amyE G Bacterial extracellular solute-binding protein
DNDENEON_01709 2.4e-135 G Phosphoglycerate mutase family
DNDENEON_01710 1.9e-62 S Protein of unknown function (DUF4235)
DNDENEON_01711 1e-142 nfrA 1.5.1.38, 1.5.1.39 C Nitroreductase family
DNDENEON_01712 1.6e-44
DNDENEON_01717 2.9e-61 ydhQ 2.7.11.1 MU cell adhesion
DNDENEON_01721 9.4e-10 S Helix-turn-helix domain
DNDENEON_01722 1.6e-57 S Helix-turn-helix domain
DNDENEON_01724 4.9e-81 aroQ 4.2.1.10 E Catalyzes a trans-dehydration via an enolate intermediate
DNDENEON_01725 0.0 aroK 2.7.1.71, 4.2.3.4 H Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
DNDENEON_01726 1.3e-221 aroC 4.2.3.5 E Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
DNDENEON_01727 9.3e-57 3.4.23.43 S Type IV leader peptidase family
DNDENEON_01728 8.9e-191 mltG S Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
DNDENEON_01729 2.7e-82 yqgF L Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
DNDENEON_01730 0.0 alaS 6.1.1.7 J Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
DNDENEON_01731 2.5e-36
DNDENEON_01732 3.4e-59 WQ51_05790 S Bacterial protein of unknown function (DUF948)
DNDENEON_01733 5.6e-129 pgm3 G Phosphoglycerate mutase family
DNDENEON_01734 8.5e-50 yvlD S Mycobacterial 4 TMS phage holin, superfamily IV
DNDENEON_01735 3.1e-110 rpsD J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
DNDENEON_01736 9.2e-150 lolD V ABC transporter
DNDENEON_01737 4.8e-216 V FtsX-like permease family
DNDENEON_01738 1.7e-61 S Domain of unknown function (DUF4418)
DNDENEON_01739 0.0 pcrA 3.6.4.12 L DNA helicase
DNDENEON_01740 1.5e-106 xpt 2.4.2.22, 2.4.2.7 F Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
DNDENEON_01741 2.8e-244 pbuX F Permease family
DNDENEON_01742 0.0 yrhL I Psort location CytoplasmicMembrane, score 9.99
DNDENEON_01743 1.7e-232 ackA 2.7.2.1, 2.7.2.15 H Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
DNDENEON_01744 1.3e-301 pta 1.1.1.40, 2.3.1.19, 2.3.1.8, 3.6.3.21 C phosphate acetyltransferase
DNDENEON_01745 0.0 xfp 4.1.2.22, 4.1.2.9 G D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase
DNDENEON_01746 5.1e-303 guaA 6.3.5.2 F Catalyzes the synthesis of GMP from XMP
DNDENEON_01747 7.1e-74 yiaC K Acetyltransferase (GNAT) domain
DNDENEON_01748 2.2e-70 yvbK 3.1.3.25 K Acetyltransferase (GNAT) domain
DNDENEON_01749 1.3e-249 aroA 2.5.1.19 E Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate
DNDENEON_01751 1.4e-212 ykiI
DNDENEON_01752 0.0 glgX 3.2.1.68 CBM48,GH13 G Belongs to the glycosyl hydrolase 13 family
DNDENEON_01753 7.5e-123 3.6.1.13 L NUDIX domain
DNDENEON_01754 7.6e-174 yqfO 3.5.4.16 L NIF3 (NGG1p interacting factor 3)
DNDENEON_01755 0.0 polA 2.7.7.7 L In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
DNDENEON_01756 9.4e-101 pdtaR T Response regulator receiver domain protein
DNDENEON_01757 2.2e-162 yeaD 4.2.1.9, 5.1.3.15 G Aldose 1-epimerase
DNDENEON_01758 1.3e-187 hbd2 1.1.1.157 I 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain
DNDENEON_01760 2.5e-305 pyk 2.7.1.40 G Pyruvate kinase
DNDENEON_01761 8.8e-176 terC P Integral membrane protein, TerC family
DNDENEON_01762 0.0 uvrB L damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
DNDENEON_01763 2.9e-114 coaE 2.7.1.24 H Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
DNDENEON_01764 8.3e-255 rpsA J Ribosomal protein S1
DNDENEON_01765 1.9e-161 folD 1.5.1.5, 3.5.4.9 F Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
DNDENEON_01766 5.9e-173 P Zinc-uptake complex component A periplasmic
DNDENEON_01767 1.3e-159 znuC P ATPases associated with a variety of cellular activities
DNDENEON_01768 3.9e-140 znuB U ABC 3 transport family
DNDENEON_01769 7.8e-88 ispF 2.1.1.228, 2.7.7.60, 4.6.1.12 H Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP)
DNDENEON_01770 3e-102 carD K CarD-like/TRCF domain
DNDENEON_01771 0.0 glgB 2.4.1.18 CBM48,GH13 G Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
DNDENEON_01772 2e-129 T Response regulator receiver domain protein
DNDENEON_01773 1.5e-187 T ATPase histidine kinase DNA gyrase B HSP90 domain protein
DNDENEON_01774 4.5e-140 ctsW S Phosphoribosyl transferase domain
DNDENEON_01775 1.1e-152 cof 5.2.1.8 T Eukaryotic phosphomannomutase
DNDENEON_01776 1.5e-71 MA20_43655 2.7.2.8 S Zincin-like metallopeptidase
DNDENEON_01777 6.3e-221
DNDENEON_01778 0.0 S Glycosyl transferase, family 2
DNDENEON_01779 3.4e-54 whiB K Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA
DNDENEON_01780 1.1e-216 K Cell envelope-related transcriptional attenuator domain
DNDENEON_01782 5.3e-170 K Cell envelope-related transcriptional attenuator domain
DNDENEON_01783 0.0 D FtsK/SpoIIIE family
DNDENEON_01784 1.9e-46 whiB K Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA
DNDENEON_01785 6e-277 pdtaS 2.7.13.3 T ATPase histidine kinase DNA gyrase B HSP90 domain protein
DNDENEON_01786 2.7e-144 yplQ S Haemolysin-III related
DNDENEON_01787 2.6e-80 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
DNDENEON_01788 1.2e-73 fkbP 5.2.1.8 G Peptidyl-prolyl cis-trans
DNDENEON_01789 2.1e-282 sdaA 4.3.1.17 E Serine dehydratase alpha chain
DNDENEON_01790 3.5e-92
DNDENEON_01792 1.7e-182 ppx 3.6.1.11, 3.6.1.40 FP Ppx/GppA phosphatase family
DNDENEON_01793 4.8e-102 ppx2 3.6.1.11, 3.6.1.40 S Protein of unknown function (DUF501)
DNDENEON_01794 2.6e-71 divIC D Septum formation initiator
DNDENEON_01795 1.5e-244 eno 4.2.1.11 G Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
DNDENEON_01796 0.0 mfd L Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
DNDENEON_01797 1.7e-113 pth 3.1.1.29 J The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
DNDENEON_01798 3.6e-99 2.3.1.183 M Acetyltransferase (GNAT) domain
DNDENEON_01799 0.0 S Uncharacterised protein family (UPF0182)
DNDENEON_01800 4e-178 ybbD 3.2.1.52 G Glycosyl hydrolase family 3 N-terminal domain protein
DNDENEON_01801 6.2e-40 ybdD S Selenoprotein, putative
DNDENEON_01802 0.0 cstA T 5TM C-terminal transporter carbon starvation CstA
DNDENEON_01803 3.2e-53 azlD E Branched-chain amino acid transport protein (AzlD)
DNDENEON_01804 8.8e-142 azlC E AzlC protein
DNDENEON_01805 1.7e-87 M Protein of unknown function (DUF3737)
DNDENEON_01806 8.4e-84 dtd J rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
DNDENEON_01807 1.2e-310 EGP Major Facilitator Superfamily
DNDENEON_01808 7.6e-146 pgl 3.1.1.31, 3.5.99.6 G Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase
DNDENEON_01809 2.6e-180 opcA G Glucose-6-phosphate dehydrogenase subunit
DNDENEON_01810 3.6e-304 zwf 1.1.1.363, 1.1.1.49 G Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
DNDENEON_01811 1e-217 patB 4.4.1.8 E Aminotransferase, class I II
DNDENEON_01812 1.2e-146 S Belongs to the short-chain dehydrogenases reductases (SDR) family
DNDENEON_01813 1.2e-277 gnd 1.1.1.343, 1.1.1.44 H Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
DNDENEON_01814 0.0 lysX S Uncharacterised conserved protein (DUF2156)
DNDENEON_01815 7.7e-242 S Putative esterase
DNDENEON_01816 9.2e-142 ybbL V ATPases associated with a variety of cellular activities
DNDENEON_01817 1.8e-134 ybbM V Uncharacterised protein family (UPF0014)
DNDENEON_01818 6e-275 deaD 3.6.4.13 JKL helicase superfamily c-terminal domain
DNDENEON_01819 6e-126 S Enoyl-(Acyl carrier protein) reductase
DNDENEON_01820 6.4e-227 rutG F Permease family
DNDENEON_01821 1.4e-155 3.1.3.73 G Phosphoglycerate mutase family
DNDENEON_01822 1.5e-135 K helix_turn_helix, arabinose operon control protein
DNDENEON_01823 3.4e-144 S Sulfite exporter TauE/SafE
DNDENEON_01824 8.5e-70 S ECF transporter, substrate-specific component
DNDENEON_01825 4.9e-79 2.7.1.48 F uridine kinase
DNDENEON_01826 5.9e-158 korD 1.2.7.3 C Domain of unknown function (DUF362)
DNDENEON_01827 6.8e-184 C Na H antiporter family protein
DNDENEON_01828 1.1e-165 MA20_14895 S Conserved hypothetical protein 698
DNDENEON_01829 1e-94
DNDENEON_01830 4.8e-86 feoB P transporter of a GTP-driven Fe(2 ) uptake system
DNDENEON_01831 2.8e-76 cysB 4.2.1.22 EGP Major facilitator Superfamily
DNDENEON_01832 1.7e-107 ahpC 1.11.1.15 O C-terminal domain of 1-Cys peroxiredoxin
DNDENEON_01833 0.0 trxB1 1.8.1.9 C Thioredoxin domain
DNDENEON_01834 1.5e-228 yhjX EGP Major facilitator Superfamily
DNDENEON_01835 3.3e-43 3.6.4.12 K Putative ATP-dependent DNA helicase recG C-terminal
DNDENEON_01836 4.3e-35 lacS G Psort location CytoplasmicMembrane, score 10.00
DNDENEON_01837 8.3e-241 vex3 V ABC transporter permease
DNDENEON_01838 5e-213 vex1 V Efflux ABC transporter, permease protein
DNDENEON_01839 3.4e-112 vex2 V ABC transporter, ATP-binding protein
DNDENEON_01840 6.9e-80 ypeA 2.3.1.1 K Psort location Cytoplasmic, score 8.87
DNDENEON_01841 4.9e-120 ybjG 3.6.1.27 I Psort location CytoplasmicMembrane, score
DNDENEON_01842 0.0 3.2.1.21 GH3 G Glycosyl hydrolase family 3 N-terminal domain protein
DNDENEON_01843 3.9e-72 S GtrA-like protein
DNDENEON_01844 1.2e-205 EGP Sugar (and other) transporter
DNDENEON_01845 1e-97 EGP Major facilitator Superfamily
DNDENEON_01846 1.4e-131 K helix_turn _helix lactose operon repressor
DNDENEON_01847 1.3e-149 rihB 3.2.2.1, 3.2.2.8 F Inosine-uridine preferring nucleoside hydrolase
DNDENEON_01849 2.4e-297 araA 5.3.1.4 G Catalyzes the conversion of L-arabinose to L-ribulose
DNDENEON_01850 6.3e-128 araD 4.1.2.17, 5.1.3.4 G Class II Aldolase and Adducin N-terminal domain
DNDENEON_01851 0.0 araB 2.7.1.16, 2.7.1.17 G FGGY family of carbohydrate kinases, C-terminal domain
DNDENEON_01852 2.1e-210 K helix_turn _helix lactose operon repressor
DNDENEON_01853 9.1e-286 maf 1.1.1.25, 2.1.1.190, 3.6.1.55, 3.6.1.67 DF Maf-like protein
DNDENEON_01854 1.4e-189 thrB 2.7.1.39 E Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
DNDENEON_01855 1.6e-241 hom 1.1.1.3 E Homoserine dehydrogenase
DNDENEON_01856 7.7e-299 lysA 4.1.1.20 E Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
DNDENEON_01857 0.0 argS 6.1.1.19 J Arginyl-tRNA synthetase
DNDENEON_01858 2.8e-271 mmuP E amino acid
DNDENEON_01859 8e-64 psp1 3.5.99.10 J Endoribonuclease L-PSP
DNDENEON_01861 4.7e-122 cyaA 4.6.1.1 S CYTH
DNDENEON_01862 1.4e-170 trxA2 O Tetratricopeptide repeat
DNDENEON_01863 6.6e-179
DNDENEON_01864 1.4e-194
DNDENEON_01865 6.8e-149 fkbB 5.2.1.8 M FKBP-type peptidyl-prolyl cis-trans isomerase
DNDENEON_01866 2.3e-122 nucS L Cleaves both 3' and 5' ssDNA extremities of branched DNA structures
DNDENEON_01867 2.3e-44 atpC C Produces ATP from ADP in the presence of a proton gradient across the membrane
DNDENEON_01868 5.6e-283 atpD 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
DNDENEON_01869 1.6e-163 atpG C Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
DNDENEON_01870 3.8e-309 atpA 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
DNDENEON_01871 4.5e-149 atpH C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
DNDENEON_01872 4.4e-57 atpF C Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
DNDENEON_01873 8.9e-31 atpE C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
DNDENEON_01874 2e-146 atpB C it plays a direct role in the translocation of protons across the membrane
DNDENEON_01875 5.4e-208 metAA 2.3.1.46 E Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
DNDENEON_01877 2.1e-52 L PFAM Integrase catalytic
DNDENEON_01878 4.6e-49 L IstB-like ATP binding protein
DNDENEON_01879 1e-56 XK26_04895
DNDENEON_01880 8.3e-28 XK26_04895
DNDENEON_01881 0.0 KL Type III restriction enzyme res subunit
DNDENEON_01882 1.3e-116 2.1.1.72, 3.1.21.4 L site-specific DNA-methyltransferase (adenine-specific) activity
DNDENEON_01883 5.4e-133 3.1.21.4 V Type III restriction enzyme res subunit
DNDENEON_01884 1.5e-56 S SIR2-like domain
DNDENEON_01885 1.2e-136 S AAA-like domain
DNDENEON_01886 2e-109 S AAA-like domain
DNDENEON_01887 0.0 S Protein of unknown function DUF262
DNDENEON_01889 4.6e-111 3.2.1.8 S alpha beta
DNDENEON_01890 1.3e-84 dtd J rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
DNDENEON_01891 2.2e-190 ghrA EH D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
DNDENEON_01892 1.3e-113 kcsA U Ion channel
DNDENEON_01893 0.0 snf 2.7.11.1 KL Psort location Cytoplasmic, score 8.87
DNDENEON_01894 3.9e-108 ribU U Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
DNDENEON_01895 0.0 ecfA GP ABC transporter, ATP-binding protein
DNDENEON_01896 2.4e-47 yhbY J CRS1_YhbY
DNDENEON_01897 1.8e-144 tenA 3.5.99.2 K Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
DNDENEON_01898 6.3e-201 S Glycosyltransferase, group 2 family protein
DNDENEON_01899 1.6e-140 ppgK 2.7.1.2, 2.7.1.63 GK ROK family
DNDENEON_01900 8.1e-221 E Aminotransferase class I and II
DNDENEON_01901 5e-145 bioM P ATPases associated with a variety of cellular activities
DNDENEON_01902 4.3e-308 2.8.2.22 S Arylsulfotransferase Ig-like domain
DNDENEON_01903 0.0 M 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
DNDENEON_01904 0.0 S Tetratricopeptide repeat
DNDENEON_01905 0.0 ligA 6.5.1.2 L DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
DNDENEON_01906 2.4e-212 mrp D Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP
DNDENEON_01907 2.9e-84 ykoE S ABC-type cobalt transport system, permease component
DNDENEON_01908 1.2e-264 ykoD P ATPases associated with a variety of cellular activities
DNDENEON_01909 1.4e-145 cbiQ P Cobalt transport protein
DNDENEON_01910 8e-252 argE E Peptidase dimerisation domain
DNDENEON_01911 9.4e-94 S Protein of unknown function (DUF3043)
DNDENEON_01912 3.8e-247 lpdA 1.16.1.1, 1.8.1.4 C Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
DNDENEON_01913 7.8e-143 S Domain of unknown function (DUF4191)
DNDENEON_01914 7.8e-282 glnA 6.3.1.2 E glutamine synthetase
DNDENEON_01915 1.5e-41 V DNA modification
DNDENEON_01916 8.3e-113 ung2 3.2.2.27 L Uracil DNA glycosylase superfamily
DNDENEON_01917 1.5e-17 L HNH endonuclease
DNDENEON_01919 2.9e-17
DNDENEON_01920 4.2e-95 yvdD 3.2.2.10 S Possible lysine decarboxylase
DNDENEON_01921 3.3e-158 IV02_28330 2.1.1.185, 2.1.1.34 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
DNDENEON_01922 2.4e-203 pheS 6.1.1.20 J Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
DNDENEON_01923 0.0 pheT 6.1.1.20 J Phenylalanyl-tRNA synthetase beta
DNDENEON_01924 7.1e-98
DNDENEON_01925 4.1e-206 argC 1.2.1.38 E Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
DNDENEON_01926 8.8e-215 argJ 2.3.1.1, 2.3.1.35, 2.7.2.8 E Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
DNDENEON_01927 8.2e-179 argB 2.7.2.8 E Belongs to the acetylglutamate kinase family. ArgB subfamily
DNDENEON_01928 1e-240 argD 2.6.1.11, 2.6.1.17 E Aminotransferase class-III
DNDENEON_01929 4.6e-185 argF 2.1.3.3 E Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
DNDENEON_01930 1.9e-84 argR K Regulates arginine biosynthesis genes
DNDENEON_01931 1.3e-237 argG 6.3.4.5 E Belongs to the argininosuccinate synthase family. Type 1 subfamily
DNDENEON_01932 2.2e-279 argH 4.3.2.1 E argininosuccinate lyase
DNDENEON_01933 9.7e-94 6.1.1.14 S Metal dependent phosphohydrolases with conserved 'HD' motif.
DNDENEON_01934 8.6e-137 S Putative ABC-transporter type IV
DNDENEON_01935 0.0 S Protein of unknown function (DUF975)
DNDENEON_01936 3.8e-251 tyrS 6.1.1.1 J Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
DNDENEON_01937 1.5e-144 L Tetratricopeptide repeat
DNDENEON_01938 3.5e-191 yutF 3.1.3.41 G Haloacid dehalogenase-like hydrolase
DNDENEON_01939 2.9e-134 tlyA 2.1.1.226, 2.1.1.227 J Ribosomal RNA large subunit methyltransferase J
DNDENEON_01940 1.2e-115 trkA P TrkA-N domain
DNDENEON_01941 2.1e-266 trkB P Cation transport protein
DNDENEON_01942 2e-177 nadK 2.7.1.23 H Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
DNDENEON_01943 1.1e-261 recN L May be involved in recombinational repair of damaged DNA
DNDENEON_01944 2.9e-122 S Haloacid dehalogenase-like hydrolase
DNDENEON_01945 4.8e-123 S ABC-2 family transporter protein
DNDENEON_01946 2.3e-173 V ATPases associated with a variety of cellular activities
DNDENEON_01947 1.7e-58 K helix_turn_helix gluconate operon transcriptional repressor
DNDENEON_01948 1.1e-23 C Acetamidase/Formamidase family
DNDENEON_01949 1.6e-44 L transposition
DNDENEON_01950 0.0 S Histidine phosphatase superfamily (branch 2)
DNDENEON_01951 1.1e-95 S Pyridoxamine 5'-phosphate oxidase
DNDENEON_01952 1.6e-23 S Psort location Cytoplasmic, score 8.87
DNDENEON_01953 4.1e-95 bcp 1.11.1.15 O Redoxin
DNDENEON_01955 1.6e-55 3.4.13.22 S Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
DNDENEON_01956 2e-166 S Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
DNDENEON_01957 6.9e-164 IQ Enoyl-(Acyl carrier protein) reductase
DNDENEON_01958 7.7e-145
DNDENEON_01959 7.4e-174 G Fic/DOC family
DNDENEON_01960 1e-107 3.1.3.27 E haloacid dehalogenase-like hydrolase
DNDENEON_01961 1e-232 EGP Major facilitator Superfamily
DNDENEON_01962 2.3e-284 thrC 4.2.3.1 E Threonine synthase N terminus
DNDENEON_01963 6.5e-251 glyA 2.1.2.1 E Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
DNDENEON_01964 6.5e-243 proA 1.2.1.41 E Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
DNDENEON_01965 3.2e-101
DNDENEON_01966 1.8e-141 nadD 2.7.7.18, 3.6.1.55 H Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
DNDENEON_01967 6.6e-201 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
DNDENEON_01969 5.3e-20
DNDENEON_01970 7.7e-45 L PFAM IS66 Orf2
DNDENEON_01971 1.4e-181 L Transposase IS66 family

eggNOG-mapper v2 (Database: eggNOG v5.0, Jul. 2018 release)